RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 FOXA1P55317 472 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 SPANXN3Q5MJ09 141 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 DEFB108BQ8NET1 73 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 LINC01560Q8TB33 94 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 CCL19Q99731 98 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 LRP1Q07954 4544 aaKnown RBP2.07□□□□□ -2.08
SMC6-208ENST00000481708 TGP01266 2768 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 ZNF727A8MUV8 499 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 TMEM256-PLSCR3K7ERE1 68 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 BCL2L11O43521 198 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 CD7P09564 240 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 DEFA4P12838 97 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 RPL30P62888 115 aaKnown RBP2.07□□□□□ -2.08
SMC6-208ENST00000481708 RTL8BQ17RB0 113 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 SLC25A34Q6PIV7 304 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 C3orf62Q6ZUJ4 267 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 IFT20Q8IY31 132 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 SDF2Q99470 211 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 PRADC1Q9BSG0 188 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 RTL8AQ9BWD3 113 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 OR2J1Q9GZK6 312 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 HMG20AQ9NP66 347 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 OR5AC2Q9NZP5 309 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 CALML5Q9NZT1 146 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 FUT9Q9Y231 359 aa2.07□□□□□ -2.08
SMC6-208ENST00000481708 FAM236AA0A1B0GUQ0 79 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 FAM236BA0A1B0GV22 79 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 PITX3O75364 302 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 PRM2P04554 102 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 P0DMU3 169 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 FAM231AP0DMU4 169 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 FAM231CP0DMU5 169 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 IGHV3-30-3P0DP02 117 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 BCL2P10415 239 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 NFYBP25208 207 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 BTG2P78543 158 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 RRN3P1Q2M238 152 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 OCIAD2Q56VL3 154 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 NAT8BQ9UHF3 227 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 C17orf98A8MV24 154 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 ODF3BA8MYP8 253 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 GADD45GO95257 159 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 RPS25P62851 125 aaKnown RBP2.06□□□□□ -2.08
SMC6-208ENST00000481708 NDPQ00604 133 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 MALSU1Q96EH3 234 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 NARS2Q96I59 477 aaKnown RBP2.06□□□□□ -2.08
SMC6-208ENST00000481708 ARFGEF3Q5TH69 2177 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 A8MWL6 223 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 J3QRK9 145 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 EMX2Q04743 252 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 KRTAP1-5Q9BYS1 174 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 ZNF355PQ9NSJ1 428 aa2.06□□□□□ -2.08
SMC6-208ENST00000481708 FAT4Q6V0I7 4981 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 TRAV9-1A0A075B6T8 112 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 IGHV1-18A0A0C4DH31 117 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 OR2H2O95918 312 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 NRASP01111 189 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 SPTBP11277 2137 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 RAB13P51153 203 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 C15orf32Q32M92 178 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 Q6P435 159 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 GLIPR1L1Q6UWM5 242 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 CROCCP2Q86T23 111 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 OR10G2Q8NGC3 310 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 SLC25A46Q96AG3 418 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 A0A0J9YWU9 116 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 M0R129 80 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 RPL22P35268 128 aaKnown RBP2.05□□□□□ -2.08
SMC6-208ENST00000481708 ZNF660Q6AZW8 331 aaPredicted RBP2.05□□□□□ -2.08
SMC6-208ENST00000481708 COMMD5Q9GZQ3 224 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 IGHV1-3A0A0C4DH29 117 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 SRP19P09132 144 aaKnown RBP2.05□□□□□ -2.08
SMC6-208ENST00000481708 HIST1H2BOP23527 126 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 HIST1H2BBP33778 126 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 HIST1H2BDP58876 126 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 HIST1H2BCP62807 126 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 HIST2H2BEQ16778 126 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.05□□□□□ -2.08
SMC6-208ENST00000481708 Q8NDZ9 215 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 OR8D4Q8NGM9 314 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 HIST1H2BHQ93079 126 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 MAGOHBQ96A72 148 aaKnown RBP2.05□□□□□ -2.08
SMC6-208ENST00000481708 HIST1H2BNQ99877 126 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 HIST1H2BMQ99879 126 aa2.05□□□□□ -2.08
SMC6-208ENST00000481708 C16orf90A8MZG2 172 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 PHOX2AO14813 284 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 APOA2P02652 100 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 ZNF728P0DKX0 622 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 CCL20P78556 96 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 C10orf91Q5T1B1 145 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 HIST1H2BAQ96A08 127 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 RNF5Q99942 180 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 MRPL32Q9BYC8 188 aaKnown RBP2.04□□□□□ -2.08
SMC6-208ENST00000481708 NKX6-2Q9C056 277 aaPredicted RBP2.04□□□□□ -2.08
SMC6-208ENST00000481708 TP53I11O14683 189 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 EVI2AP22794 236 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 EBI3Q14213 229 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 LCE1FQ5T754 118 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 Q6ZTC4 211 aa2.04□□□□□ -2.08
SMC6-208ENST00000481708 YIPF3Q9GZM5 350 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms