RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 WFDC10BQ8IUB3 73 aa12.63□□□□□ -0.39
CLK1-211ENST00000481641 TRAV4A0A0B4J268 109 aa12.62□□□□□ -0.39
CLK1-211ENST00000481641 M0R2P5 195 aa12.62□□□□□ -0.39
CLK1-211ENST00000481641 Q5BKY6 102 aa12.62□□□□□ -0.39
CLK1-211ENST00000481641 OR4C5Q8NGB2 326 aa12.62□□□□□ -0.39
CLK1-211ENST00000481641 PCNPQ8WW12 178 aaKnown RBP12.62□□□□□ -0.39
CLK1-211ENST00000481641 STAG3L2P0CL84 134 aa12.61□□□□□ -0.39
CLK1-211ENST00000481641 STAG3L3P0CL85 134 aa12.61□□□□□ -0.39
CLK1-211ENST00000481641 ATP6V0CP27449 155 aa12.61□□□□□ -0.39
CLK1-211ENST00000481641 ARL6IP6Q8N6S5 226 aa12.61□□□□□ -0.39
CLK1-211ENST00000481641 RAB24Q969Q5 203 aa12.61□□□□□ -0.39
CLK1-211ENST00000481641 GCHFRP30047 84 aa12.6□□□□□ -0.39
CLK1-211ENST00000481641 ZNF80P51504 273 aaPredicted RBP12.6□□□□□ -0.39
CLK1-211ENST00000481641 OR2G3Q8NGZ4 309 aa12.6□□□□□ -0.39
CLK1-211ENST00000481641 SH3BGRL3Q9H299 93 aa12.6□□□□□ -0.39
CLK1-211ENST00000481641 SDF2L1Q9HCN8 221 aa12.6□□□□□ -0.39
CLK1-211ENST00000481641 C11orf21Q9P2W6 132 aa12.6□□□□□ -0.39
CLK1-211ENST00000481641 LY96Q9Y6Y9 160 aa12.6□□□□□ -0.39
CLK1-211ENST00000481641 ORM1P02763 201 aa12.59□□□□□ -0.39
CLK1-211ENST00000481641 DNAH10OSP0CZ25 163 aa12.59□□□□□ -0.39
CLK1-211ENST00000481641 ASB13Q8WXK3 278 aa12.59□□□□□ -0.39
CLK1-211ENST00000481641 AQP10Q96PS8 301 aa12.59□□□□□ -0.39
CLK1-211ENST00000481641 MED28Q9H204 178 aa12.59□□□□□ -0.39
CLK1-211ENST00000481641 C9JCJ5 164 aa12.58□□□□□ -0.4
CLK1-211ENST00000481641 TCRAP04437 139 aa12.58□□□□□ -0.4
CLK1-211ENST00000481641 Q8N1X5 172 aa12.58□□□□□ -0.4
CLK1-211ENST00000481641 C5orf17Q8NAS9 161 aa12.58□□□□□ -0.4
CLK1-211ENST00000481641 SUN5Q8TC36 379 aa12.58□□□□□ -0.4
CLK1-211ENST00000481641 PSMG3Q9BT73 122 aaPredicted RBP12.58□□□□□ -0.4
CLK1-211ENST00000481641 SCRT2Q9NQ03 307 aa12.58□□□□□ -0.4
CLK1-211ENST00000481641 PSG8Q9UQ74 426 aa12.58□□□□□ -0.4
CLK1-211ENST00000481641 GATA1P15976 413 aaPredicted RBP12.57□□□□□ -0.4
CLK1-211ENST00000481641 ERVFC1-1P60608 527 aa12.57□□□□□ -0.4
CLK1-211ENST00000481641 SUMO1P63165 101 aaKnown RBP12.57□□□□□ -0.4
CLK1-211ENST00000481641 DPPA3Q6W0C5 159 aa12.57□□□□□ -0.4
CLK1-211ENST00000481641 TMEM75Q8N9X5 138 aa12.57□□□□□ -0.4
CLK1-211ENST00000481641 KCNS1Q96KK3 526 aa12.57□□□□□ -0.4
CLK1-211ENST00000481641 TXNDC17Q9BRA2 123 aa12.57□□□□□ -0.4
CLK1-211ENST00000481641 NDFIP1Q9BT67 221 aa12.57□□□□□ -0.4
CLK1-211ENST00000481641 TRAV9-2A0A087WT02 112 aa12.56□□□□□ -0.4
CLK1-211ENST00000481641 GGTLC3B5MD39 225 aa12.56□□□□□ -0.4
CLK1-211ENST00000481641 GCGP01275 180 aa12.56□□□□□ -0.4
CLK1-211ENST00000481641 IGLV2-11P01706 119 aa12.56□□□□□ -0.4
CLK1-211ENST00000481641 PRNTQ86SH4 94 aa12.56□□□□□ -0.4
CLK1-211ENST00000481641 NHLRC2Q8NBF2 726 aa12.56□□□□□ -0.4
CLK1-211ENST00000481641 BATF3Q9NR55 127 aa12.56□□□□□ -0.4
CLK1-211ENST00000481641 MSRB1Q9NZV6 116 aa12.56□□□□□ -0.4
CLK1-211ENST00000481641 IGHV3-73A0A0B4J1V6 119 aa12.55□□□□□ -0.4
CLK1-211ENST00000481641 SERTM2A0A1B0GWG4 89 aa12.55□□□□□ -0.4
CLK1-211ENST00000481641 EREGO14944 169 aa12.55□□□□□ -0.4
CLK1-211ENST00000481641 PTTG1O95997 202 aa12.55□□□□□ -0.4
CLK1-211ENST00000481641 EVI2AP22794 236 aa12.55□□□□□ -0.4
CLK1-211ENST00000481641 NFE4Q86UQ8 179 aa12.55□□□□□ -0.4
CLK1-211ENST00000481641 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
CLK1-211ENST00000481641 EPDR1Q9UM22 224 aa12.55□□□□□ -0.4
CLK1-211ENST00000481641 A0A087WTM6 91 aa12.54□□□□□ -0.4
CLK1-211ENST00000481641 FBLL1A6NHQ2 334 aaKnown RBP12.54□□□□□ -0.4
CLK1-211ENST00000481641 MBP02144 154 aa12.54□□□□□ -0.4
CLK1-211ENST00000481641 SERF2P84101 59 aa12.54□□□□□ -0.4
CLK1-211ENST00000481641 FLI1Q01543 452 aaPredicted RBP12.54□□□□□ -0.4
CLK1-211ENST00000481641 ZNF876PQ49A33 203 aa12.54□□□□□ -0.4
CLK1-211ENST00000481641 CFAP126Q5VTH2 177 aa12.54□□□□□ -0.4
CLK1-211ENST00000481641 RPL7L1Q6DKI1 246 aaKnown RBP12.54□□□□□ -0.4
CLK1-211ENST00000481641 ACTR3CQ9C0K3 210 aaPredicted RBP12.54□□□□□ -0.4
CLK1-211ENST00000481641 K7EQM0 130 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 TAAR5O14804 337 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 RS1O15537 224 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 CXorf1O96002 111 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 CRYGDP07320 174 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 SLC25A29Q8N8R3 303 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 LINC00479Q96M42 142 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 C9orf85Q96MD7 179 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 TMEM167BQ9NRX6 74 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 TNFSF18Q9UNG2 199 aa12.53□□□□□ -0.4
CLK1-211ENST00000481641 TRAV34A0A0B4J273 112 aa12.52□□□□□ -0.41
CLK1-211ENST00000481641 RNF222A6NCQ9 220 aa12.52□□□□□ -0.41
CLK1-211ENST00000481641 PGPEP1LA6NFU8 196 aa12.52□□□□□ -0.41
CLK1-211ENST00000481641 PFN1P07737 140 aaKnown RBP12.52□□□□□ -0.41
CLK1-211ENST00000481641 GIPP09681 153 aaPredicted RBP12.52□□□□□ -0.41
CLK1-211ENST00000481641 PPT1P50897 306 aa12.52□□□□□ -0.41
CLK1-211ENST00000481641 ZNF726P1Q15940 193 aa12.52□□□□□ -0.41
CLK1-211ENST00000481641 SMUG1Q53HV7 270 aa12.52□□□□□ -0.41
CLK1-211ENST00000481641 CYB561D1Q8N8Q1 229 aa12.52□□□□□ -0.41
CLK1-211ENST00000481641 FXYD6-FXYD2A0A087WZ82 144 aa12.51□□□□□ -0.41
CLK1-211ENST00000481641 ZNF506Q5JVG8 444 aa12.51□□□□□ -0.41
CLK1-211ENST00000481641 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
CLK1-211ENST00000481641 RNASE3P12724 160 aaKnown RBP12.5□□□□□ -0.41
CLK1-211ENST00000481641 KRTAP10-1P60331 282 aa12.5□□□□□ -0.41
CLK1-211ENST00000481641 UBE2G2P60604 165 aa12.5□□□□□ -0.41
CLK1-211ENST00000481641 ZFP69Q49AA0 526 aa12.5□□□□□ -0.41
CLK1-211ENST00000481641 SH2D6Q7Z4S9 175 aa12.5□□□□□ -0.41
CLK1-211ENST00000481641 IGHV3-38A0A0C4DH36 116 aa12.49□□□□□ -0.41
CLK1-211ENST00000481641 TIRAPP58753 221 aa12.49□□□□□ -0.41
CLK1-211ENST00000481641 PRADC1Q9BSG0 188 aa12.49□□□□□ -0.41
CLK1-211ENST00000481641 BORCS7-ASMTA0A0B4J1R7 106 aa12.48□□□□□ -0.41
CLK1-211ENST00000481641 IGKV3D-20A0A0C4DH25 116 aa12.48□□□□□ -0.41
CLK1-211ENST00000481641 A0A1W2PRE2 83 aa12.48□□□□□ -0.41
CLK1-211ENST00000481641 K7EP13 123 aa12.48□□□□□ -0.41
CLK1-211ENST00000481641 FGF8P55075 233 aaPredicted RBP12.48□□□□□ -0.41
CLK1-211ENST00000481641 XGP55808 180 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms