RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 M0R2Z0 102 aa10.16□□□□□ -0.78
TRAF4-210ENST00000475329 PHOX2AO14813 284 aa10.16□□□□□ -0.78
TRAF4-210ENST00000475329 KIR3DS1Q14943 382 aa10.16□□□□□ -0.78
TRAF4-210ENST00000475329 GFI1BQ5VTD9 330 aa10.16□□□□□ -0.78
TRAF4-210ENST00000475329 LYZL1Q6UWQ5 148 aa10.16□□□□□ -0.78
TRAF4-210ENST00000475329 Q6ZQT7 251 aa10.16□□□□□ -0.78
TRAF4-210ENST00000475329 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
TRAF4-210ENST00000475329 C3orf56Q8N813 242 aa10.16□□□□□ -0.78
TRAF4-210ENST00000475329 CLUHP3Q96NS8 147 aa10.16□□□□□ -0.78
TRAF4-210ENST00000475329 MCRIP2Q9BUT9 160 aaKnown RBP10.16□□□□□ -0.78
TRAF4-210ENST00000475329 MRPL18Q9H0U6 180 aaKnown RBP10.16□□□□□ -0.78
TRAF4-210ENST00000475329 TRAV12-3A0A0B4J271 114 aa10.15□□□□□ -0.78
TRAF4-210ENST00000475329 RBMY1BA6NDE4 496 aaKnown RBP10.15□□□□□ -0.78
TRAF4-210ENST00000475329 RBMY1EA6NEQ0 496 aaKnown RBP10.15□□□□□ -0.78
TRAF4-210ENST00000475329 S100A8P05109 93 aa10.15□□□□□ -0.78
TRAF4-210ENST00000475329 RBMY1DP0C7P1 496 aaKnown RBP10.15□□□□□ -0.78
TRAF4-210ENST00000475329 ARMS2P0C7Q2 107 aa10.15□□□□□ -0.78
TRAF4-210ENST00000475329 C12orf54Q6X4T0 127 aa10.15□□□□□ -0.78
TRAF4-210ENST00000475329 STHQ8IWL8 128 aa10.15□□□□□ -0.78
TRAF4-210ENST00000475329 TRAV12-2A0A075B6T6 113 aa10.14□□□□□ -0.79
TRAF4-210ENST00000475329 F2Z2F3 143 aa10.14□□□□□ -0.79
TRAF4-210ENST00000475329 CAMPP49913 170 aa10.14□□□□□ -0.79
TRAF4-210ENST00000475329 ANXA2RQ3ZCQ2 193 aa10.14□□□□□ -0.79
TRAF4-210ENST00000475329 MUC21Q5SSG8 566 aa10.14□□□□□ -0.79
TRAF4-210ENST00000475329 SHISA2Q6UWI4 295 aa10.14□□□□□ -0.79
TRAF4-210ENST00000475329 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
TRAF4-210ENST00000475329 KCNS1Q96KK3 526 aa10.14□□□□□ -0.79
TRAF4-210ENST00000475329 ATRQ13535 2644 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST1H2BKO60814 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 ZNF324O75467 553 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-210ENST00000475329 AMBPP02760 352 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST1H2BJP06899 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 CD7P09564 240 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 TRGC1P0CF51 173 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST1H2BOP23527 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST1H2BBP33778 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 ASIPP42127 132 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 FXYD7P58549 80 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST1H2BDP58876 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST1H2BCP62807 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST2H2BEQ16778 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.13□□□□□ -0.79
TRAF4-210ENST00000475329 FAM159AQ6UWV7 190 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 TRPT1Q86TN4 253 aaKnown RBP10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST1H2BHQ93079 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST1H2BNQ99877 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 HIST1H2BMQ99879 126 aa10.13□□□□□ -0.79
TRAF4-210ENST00000475329 H3BVH4 76 aa10.12□□□□□ -0.79
TRAF4-210ENST00000475329 APCSP02743 223 aa10.12□□□□□ -0.79
TRAF4-210ENST00000475329 S100A6P06703 90 aa10.12□□□□□ -0.79
TRAF4-210ENST00000475329 MED14OSP0DP75 135 aa10.12□□□□□ -0.79
TRAF4-210ENST00000475329 DNLZQ5SXM8 178 aa10.12□□□□□ -0.79
TRAF4-210ENST00000475329 GATD1Q8NB37 220 aa10.12□□□□□ -0.79
TRAF4-210ENST00000475329 WFDC9Q8NEX5 89 aa10.12□□□□□ -0.79
TRAF4-210ENST00000475329 MDFIQ99750 246 aa10.12□□□□□ -0.79
TRAF4-210ENST00000475329 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
TRAF4-210ENST00000475329 SNAI2O43623 268 aa10.11□□□□□ -0.79
TRAF4-210ENST00000475329 OR5AL1P0C617 328 aa10.11□□□□□ -0.79
TRAF4-210ENST00000475329 S100A4P26447 101 aaKnown RBP10.11□□□□□ -0.79
TRAF4-210ENST00000475329 CACNG7P62955 275 aa10.11□□□□□ -0.79
TRAF4-210ENST00000475329 TDRG1Q3Y452 100 aa10.11□□□□□ -0.79
TRAF4-210ENST00000475329 CNFNQ9BYD5 112 aa10.11□□□□□ -0.79
TRAF4-210ENST00000475329 C19orf73Q9NVV2 129 aa10.11□□□□□ -0.79
TRAF4-210ENST00000475329 IGHV1OR15-1A0A075B7D0 117 aa10.1□□□□□ -0.79
TRAF4-210ENST00000475329 CRXO43186 299 aaPredicted RBP10.1□□□□□ -0.79
TRAF4-210ENST00000475329 INSP01308 110 aa10.1□□□□□ -0.79
TRAF4-210ENST00000475329 NUTF2P61970 127 aaKnown RBP10.1□□□□□ -0.79
TRAF4-210ENST00000475329 SLAQ13239 276 aa10.1□□□□□ -0.79
TRAF4-210ENST00000475329 TWIST1Q15672 202 aa10.1□□□□□ -0.79
TRAF4-210ENST00000475329 GTSCR1Q86UQ5 136 aa10.1□□□□□ -0.79
TRAF4-210ENST00000475329 C20orf144Q9BQM9 153 aa10.1□□□□□ -0.79
TRAF4-210ENST00000475329 SSBP4Q9BWG4 385 aaPredicted RBP10.1□□□□□ -0.79
TRAF4-210ENST00000475329 MUC21A0A0G2JKD1 596 aa10.09□□□□□ -0.79
TRAF4-210ENST00000475329 MUC21A0A140T8X8 626 aa10.09□□□□□ -0.79
TRAF4-210ENST00000475329 GNRH2O43555 120 aa10.09□□□□□ -0.79
TRAF4-210ENST00000475329 NTF3P20783 257 aa10.09□□□□□ -0.79
TRAF4-210ENST00000475329 NDUFA6P56556 154 aa10.09□□□□□ -0.79
TRAF4-210ENST00000475329 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
TRAF4-210ENST00000475329 TIMM8BQ9Y5J9 83 aaPredicted RBP10.09□□□□□ -0.79
TRAF4-210ENST00000475329 TRGV11A0A075B6L2 103 aa10.08□□□□□ -0.8
TRAF4-210ENST00000475329 WIPF1O43516 503 aa10.08□□□□□ -0.8
TRAF4-210ENST00000475329 RBMY1A1P0DJD3 496 aaKnown RBP10.08□□□□□ -0.8
TRAF4-210ENST00000475329 RBMY1CP0DJD4 496 aa10.08□□□□□ -0.8
TRAF4-210ENST00000475329 IGLL1P15814 213 aa10.08□□□□□ -0.8
TRAF4-210ENST00000475329 SSTP61278 116 aa10.08□□□□□ -0.8
TRAF4-210ENST00000475329 RBMY1FQ15415 496 aaKnown RBP10.08□□□□□ -0.8
TRAF4-210ENST00000475329 SPANXN1Q5VSR9 72 aa10.08□□□□□ -0.8
TRAF4-210ENST00000475329 ZNF493Q6ZR52 646 aa10.08□□□□□ -0.8
TRAF4-210ENST00000475329 OR10AG1Q8NH19 301 aa10.08□□□□□ -0.8
TRAF4-210ENST00000475329 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
TRAF4-210ENST00000475329 RNASE3P12724 160 aaKnown RBP10.07□□□□□ -0.8
TRAF4-210ENST00000475329 KIAA1644Q3SXP7 199 aa10.07□□□□□ -0.8
TRAF4-210ENST00000475329 SCRT2Q9NQ03 307 aa10.07□□□□□ -0.8
TRAF4-210ENST00000475329 PHLDA3Q9Y5J5 127 aa10.07□□□□□ -0.8
TRAF4-210ENST00000475329 LOC102724200A0A096LPH7 203 aaPredicted RBP10.06□□□□□ -0.8
TRAF4-210ENST00000475329 IGHV3-16A0A0C4DH30 117 aa10.06□□□□□ -0.8
TRAF4-210ENST00000475329 LOC105371267A0A1B0GV96 52 aa10.06□□□□□ -0.8
TRAF4-210ENST00000475329 C5orf52A6NGY3 159 aa10.06□□□□□ -0.8
TRAF4-210ENST00000475329 SRIP30626 198 aa10.06□□□□□ -0.8
TRAF4-210ENST00000475329 SNRPEP62304 92 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms