RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 OR10AG1Q8NH19 301 aa16.34■□□□□ 0.21
CCM2-206ENST00000474617 TMEM70Q9BUB7 260 aa16.34■□□□□ 0.21
CCM2-206ENST00000474617 TCF21O43680 179 aa16.33■□□□□ 0.2
CCM2-206ENST00000474617 S100A4P26447 101 aaKnown RBP16.33■□□□□ 0.2
CCM2-206ENST00000474617 DEFB125Q8N687 156 aa16.33■□□□□ 0.2
CCM2-206ENST00000474617 OR9G4Q8NGQ1 327 aa16.33■□□□□ 0.2
CCM2-206ENST00000474617 ZNF418Q8TF45 676 aaPredicted RBP16.33■□□□□ 0.2
CCM2-206ENST00000474617 DUX5Q96PT3 197 aa16.33■□□□□ 0.2
CCM2-206ENST00000474617 RNASE4P34096 147 aaKnown RBP16.32■□□□□ 0.2
CCM2-206ENST00000474617 PSMG4Q5JS54 123 aa16.32■□□□□ 0.2
CCM2-206ENST00000474617 Q8N976 141 aa16.32■□□□□ 0.2
CCM2-206ENST00000474617 OR11H1Q8NG94 326 aa16.32■□□□□ 0.2
CCM2-206ENST00000474617 RNF185Q96GF1 192 aa16.32■□□□□ 0.2
CCM2-206ENST00000474617 MAP1LC3AQ9H492 121 aa16.32■□□□□ 0.2
CCM2-206ENST00000474617 SCRT2Q9NQ03 307 aa16.32■□□□□ 0.2
CCM2-206ENST00000474617 ZFHX3Q15911 3703 aa16.31■□□□□ 0.2
CCM2-206ENST00000474617 WFDC3Q8IUB2 231 aa16.31■□□□□ 0.2
CCM2-206ENST00000474617 MRAP2Q96G30 205 aa16.31■□□□□ 0.2
CCM2-206ENST00000474617 JMJD8Q96S16 334 aa16.31■□□□□ 0.2
CCM2-206ENST00000474617 NXT2Q9NPJ8 142 aaKnown RBP16.31■□□□□ 0.2
CCM2-206ENST00000474617 LINC01546A6NGU7 62 aa16.3■□□□□ 0.2
CCM2-206ENST00000474617 ZNF688P0C7X2 276 aa16.3■□□□□ 0.2
CCM2-206ENST00000474617 SRD5A1P18405 259 aa16.3■□□□□ 0.2
CCM2-206ENST00000474617 TDRG1Q3Y452 100 aa16.3■□□□□ 0.2
CCM2-206ENST00000474617 MAP1LC3CQ9BXW4 147 aa16.3■□□□□ 0.2
CCM2-206ENST00000474617 PRSS47A8MTI9 375 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 F6UB75 175 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 EDN2P20800 178 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 PET117Q6UWS5 81 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 FAM159AQ6UWV7 190 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 KLHL30-AS1Q8NEE0 82 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 PRO1933Q9H354 126 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 SIGLEC8Q9NYZ4 499 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 TRAV25A0A0B4J276 109 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 C7orf71A4D174 169 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 CD33P20138 364 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 ANXA2RQ3ZCQ2 193 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 NDUFAF3Q9BU61 184 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 PHLDA3Q9Y5J5 127 aa16.29■□□□□ 0.2
CCM2-206ENST00000474617 FLNAP21333 2647 aaKnown RBP16.28■□□□□ 0.2
CCM2-206ENST00000474617 PDZD2O15018 2839 aa16.28■□□□□ 0.2
CCM2-206ENST00000474617 H3BVH4 76 aa16.28■□□□□ 0.2
CCM2-206ENST00000474617 PPP1R17O96001 155 aa16.28■□□□□ 0.2
CCM2-206ENST00000474617 CSN3P07498 182 aa16.28■□□□□ 0.2
CCM2-206ENST00000474617 SLURP1P55000 103 aa16.28■□□□□ 0.2
CCM2-206ENST00000474617 KHDC1LQ5JSQ8 128 aa16.28■□□□□ 0.2
CCM2-206ENST00000474617 ESM1Q9NQ30 184 aa16.28■□□□□ 0.2
CCM2-206ENST00000474617 MSRB1Q9NZV6 116 aa16.28■□□□□ 0.2
CCM2-206ENST00000474617 UNC79Q9P2D8 2635 aa16.28■□□□□ 0.2
CCM2-206ENST00000474617 CCDC168Q8NDH2 2452 aa16.27■□□□□ 0.2
CCM2-206ENST00000474617 MUC21A0A0G2JKD1 596 aa16.27■□□□□ 0.2
CCM2-206ENST00000474617 MUC21A0A140T8X8 626 aa16.27■□□□□ 0.2
CCM2-206ENST00000474617 NXPH4O95158 308 aa16.27■□□□□ 0.2
CCM2-206ENST00000474617 CDKN1BP46527 198 aa16.27■□□□□ 0.2
CCM2-206ENST00000474617 MUC21Q5SSG8 566 aa16.27■□□□□ 0.2
CCM2-206ENST00000474617 SPATA12Q7Z6I5 190 aa16.27■□□□□ 0.2
CCM2-206ENST00000474617 MRPL52Q86TS9 123 aaKnown RBP16.27■□□□□ 0.2
CCM2-206ENST00000474617 RNF114Q9Y508 228 aa16.27■□□□□ 0.2
CCM2-206ENST00000474617 A8MTW9 85 aa16.26■□□□□ 0.19
CCM2-206ENST00000474617 SYS1-DBNDD2H3BUS1 97 aa16.26■□□□□ 0.19
CCM2-206ENST00000474617 IFI27P40305 119 aaPredicted RBP16.26■□□□□ 0.19
CCM2-206ENST00000474617 HILS1P60008 231 aa16.26■□□□□ 0.19
CCM2-206ENST00000474617 SSTP61278 116 aa16.26■□□□□ 0.19
CCM2-206ENST00000474617 CTAG1AP78358 180 aa16.26■□□□□ 0.19
CCM2-206ENST00000474617 LBHQ53QV2 105 aaPredicted RBP16.26■□□□□ 0.19
CCM2-206ENST00000474617 MYO9AB2RTY4 2548 aa16.25■□□□□ 0.19
CCM2-206ENST00000474617 NDUFA7O95182 113 aa16.25■□□□□ 0.19
CCM2-206ENST00000474617 TFPI2P48307 235 aa16.25■□□□□ 0.19
CCM2-206ENST00000474617 FHL3Q13643 280 aa16.25■□□□□ 0.19
CCM2-206ENST00000474617 DYNLRB2Q8TF09 96 aa16.25■□□□□ 0.19
CCM2-206ENST00000474617 DPH3P1Q9H4G8 78 aa16.25■□□□□ 0.19
CCM2-206ENST00000474617 TSSC4Q9Y5U2 329 aaPredicted RBP16.25■□□□□ 0.19
CCM2-206ENST00000474617 TNFRSF6BO95407 300 aa16.24■□□□□ 0.19
CCM2-206ENST00000474617 NPYP01303 97 aa16.24■□□□□ 0.19
CCM2-206ENST00000474617 PRR31Q5SQ13 230 aa16.24■□□□□ 0.19
CCM2-206ENST00000474617 ADAMTSL5Q6ZMM2 481 aa16.24■□□□□ 0.19
CCM2-206ENST00000474617 AP1S3Q96PC3 154 aa16.24■□□□□ 0.19
CCM2-206ENST00000474617 OR4C46A6NHA9 309 aa16.24■□□□□ 0.19
CCM2-206ENST00000474617 HBDP02042 147 aa16.24■□□□□ 0.19
CCM2-206ENST00000474617 OR2K2Q8NGT1 345 aa16.24■□□□□ 0.19
CCM2-206ENST00000474617 SPAG8Q99932 426 aaPredicted RBP16.24■□□□□ 0.19
CCM2-206ENST00000474617 J3KRW8 73 aa16.23■□□□□ 0.19
CCM2-206ENST00000474617 K7EMI3 77 aa16.23■□□□□ 0.19
CCM2-206ENST00000474617 M0R381 172 aa16.23■□□□□ 0.19
CCM2-206ENST00000474617 EVI2AP22794 236 aa16.23■□□□□ 0.19
CCM2-206ENST00000474617 DEFB1P60022 68 aa16.23■□□□□ 0.19
CCM2-206ENST00000474617 DEFB136Q30KP8 78 aa16.23■□□□□ 0.19
CCM2-206ENST00000474617 MIEN1Q9BRT3 115 aa16.23■□□□□ 0.19
CCM2-206ENST00000474617 TRAV9-2A0A087WT02 112 aa16.22■□□□□ 0.19
CCM2-206ENST00000474617 C18orf65Q6ZTR6 163 aa16.22■□□□□ 0.19
CCM2-206ENST00000474617 Q8N8P6 123 aa16.22■□□□□ 0.19
CCM2-206ENST00000474617 DLX4Q92988 240 aaPredicted RBP16.22■□□□□ 0.19
CCM2-206ENST00000474617 CLUHP3Q96NS8 147 aa16.22■□□□□ 0.19
CCM2-206ENST00000474617 ZNF747Q9BV97 191 aa16.22■□□□□ 0.19
CCM2-206ENST00000474617 TLN2Q9Y4G6 2542 aa16.21■□□□□ 0.19
CCM2-206ENST00000474617 RNASE3P12724 160 aaKnown RBP16.21■□□□□ 0.19
CCM2-206ENST00000474617 HLA-DRB4P13762 266 aa16.21■□□□□ 0.19
CCM2-206ENST00000474617 PAM16Q9Y3D7 125 aa16.21■□□□□ 0.19
CCM2-206ENST00000474617 HLA-DRB4X5D2U9 266 aa16.21■□□□□ 0.19
CCM2-206ENST00000474617 LOC389332A0A1B0GUA5 103 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms