RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 EIF5AP63241 154 aaKnown RBP8.05□□□□□ -1.12
CPNE1-222ENST00000473373 SLAQ13239 276 aa8.05□□□□□ -1.12
CPNE1-222ENST00000473373 CST9LP1Q5W188 147 aa8.05□□□□□ -1.12
CPNE1-222ENST00000473373 C8orf49Q96NF6 230 aa8.05□□□□□ -1.12
CPNE1-222ENST00000473373 MDFICQ9P1T7 246 aa8.05□□□□□ -1.12
CPNE1-222ENST00000473373 LINC00588Q9Y4M8 146 aa8.05□□□□□ -1.12
CPNE1-222ENST00000473373 A0A0D9SG52 128 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 A0A1B0GV50 99 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 A0A1W2PRE2 83 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 FBLL1A6NHQ2 334 aaKnown RBP8.04□□□□□ -1.12
CPNE1-222ENST00000473373 GGTLC3B5MD39 225 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 C9JCJ5 164 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 GNRH2O43555 120 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 ZNF345Q14585 488 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 SAPCD1Q5SSQ6 148 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 TMEM75Q8N9X5 138 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 FAM213BQ8TBF2 198 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 NKX6-2Q9C056 277 aaPredicted RBP8.04□□□□□ -1.12
CPNE1-222ENST00000473373 PRO0255Q9UI72 69 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 ABCA13Q86UQ4 5058 aa8.04□□□□□ -1.12
CPNE1-222ENST00000473373 A0A096LPF7 62 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 TRAV34A0A0B4J273 112 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 H3BNG1 76 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 J3QL48 77 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 M0R2P5 195 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 PEX7O00628 323 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 TYMSP04818 313 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 SFTA3P0C7M3 94 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 S100A4P26447 101 aaKnown RBP8.03□□□□□ -1.12
CPNE1-222ENST00000473373 ZNF726P1Q15940 193 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 TTC32Q5I0X7 151 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 KCNRGQ8N5I3 272 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 OR4C5Q8NGB2 326 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 C18orf15Q96N68 181 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 Q9H8V8 135 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
CPNE1-222ENST00000473373 NBDYA0A0U1RRE5 68 aa8.02□□□□□ -1.13
CPNE1-222ENST00000473373 G3V3Q6 166 aa8.02□□□□□ -1.13
CPNE1-222ENST00000473373 BCL2L11O43521 198 aa8.02□□□□□ -1.13
CPNE1-222ENST00000473373 PFN1P07737 140 aaKnown RBP8.02□□□□□ -1.13
CPNE1-222ENST00000473373 SRIP30626 198 aa8.02□□□□□ -1.13
CPNE1-222ENST00000473373 MRPL23Q16540 153 aaKnown RBP8.02□□□□□ -1.13
CPNE1-222ENST00000473373 SUN5Q8TC36 379 aa8.02□□□□□ -1.13
CPNE1-222ENST00000473373 SFT2D1Q8WV19 159 aa8.02□□□□□ -1.13
CPNE1-222ENST00000473373 TVP23CQ96ET8 276 aa8.02□□□□□ -1.13
CPNE1-222ENST00000473373 VPS13DQ5THJ4 4388 aa8.02□□□□□ -1.13
CPNE1-222ENST00000473373 TRAV4A0A0B4J268 109 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 IGHV3-16A0A0C4DH30 117 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 FAM74A7A6NL05 159 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 HMSDA8MTL9 139 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 UMAD1C9J7I0 102 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 TPT1P13693 172 aaKnown RBP8.01□□□□□ -1.13
CPNE1-222ENST00000473373 AKR1C3P42330 323 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 ESRGQ1W209 222 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 TDRG1Q3Y452 100 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 ZNRF2Q8NHG8 242 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 HIST1H2BAQ96A08 127 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 VSIG2Q96IQ7 327 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 ZNF479Q96JC4 524 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 CYTL1Q9NRR1 136 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 ARL2-SNX15V9GYD0 113 aa8.01□□□□□ -1.13
CPNE1-222ENST00000473373 ORM1P02763 201 aa8□□□□□ -1.13
CPNE1-222ENST00000473373 SEC11BP0C7V7 166 aa8□□□□□ -1.13
CPNE1-222ENST00000473373 GYPEP15421 78 aa8□□□□□ -1.13
CPNE1-222ENST00000473373 CRYBA4P53673 196 aa8□□□□□ -1.13
CPNE1-222ENST00000473373 ZNF876PQ49A33 203 aa8□□□□□ -1.13
CPNE1-222ENST00000473373 Q6ZR54 194 aa8□□□□□ -1.13
CPNE1-222ENST00000473373 C6orf223Q8N319 242 aa8□□□□□ -1.13
CPNE1-222ENST00000473373 NHLRC2Q8NBF2 726 aa8□□□□□ -1.13
CPNE1-222ENST00000473373 LINC00479Q96M42 142 aa8□□□□□ -1.13
CPNE1-222ENST00000473373 MRPS16Q9Y3D3 137 aaKnown RBP8□□□□□ -1.13
CPNE1-222ENST00000473373 FABP5P3A8MUU1 101 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 TEX46H3BTG2 121 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 RTL8CO15255 209 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 FHITP49789 147 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 ZNF80P51504 273 aaPredicted RBP7.99□□□□□ -1.13
CPNE1-222ENST00000473373 FHL2Q14192 279 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 TMUB2Q71RG4 321 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 NEGR1Q7Z3B1 354 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 Q86TA4 180 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 OR11H4Q8NGC9 324 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 RASL10AQ92737 203 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 FMC1Q96HJ9 113 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 TXNDC17Q9BRA2 123 aa7.99□□□□□ -1.13
CPNE1-222ENST00000473373 B4DEV8 164 aa7.98□□□□□ -1.13
CPNE1-222ENST00000473373 M0R036 132 aa7.98□□□□□ -1.13
CPNE1-222ENST00000473373 SIVA1O15304 175 aa7.98□□□□□ -1.13
CPNE1-222ENST00000473373 PAGE4O60829 102 aa7.98□□□□□ -1.13
CPNE1-222ENST00000473373 IGLV2-11P01706 119 aa7.98□□□□□ -1.13
CPNE1-222ENST00000473373 H2AFB1P0C5Y9 115 aa7.98□□□□□ -1.13
CPNE1-222ENST00000473373 ASIPP42127 132 aa7.98□□□□□ -1.13
CPNE1-222ENST00000473373 LGALSLQ3ZCW2 172 aaPredicted RBP7.98□□□□□ -1.13
CPNE1-222ENST00000473373 EIF5AL1Q6IS14 154 aaKnown RBP7.98□□□□□ -1.13
CPNE1-222ENST00000473373 PGPEP1Q9NXJ5 209 aa7.98□□□□□ -1.13
CPNE1-222ENST00000473373 hCG_2014768A0A024R1R8 64 aa7.97□□□□□ -1.13
CPNE1-222ENST00000473373 IGHV3-73A0A0B4J1V6 119 aa7.97□□□□□ -1.13
CPNE1-222ENST00000473373 NXPH4O95158 308 aa7.97□□□□□ -1.13
CPNE1-222ENST00000473373 DPPA3Q6W0C5 159 aa7.97□□□□□ -1.13
CPNE1-222ENST00000473373 TCEAL7Q9BRU2 100 aa7.97□□□□□ -1.13
CPNE1-222ENST00000473373 PRADC1Q9BSG0 188 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms