RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 GPN1Q9HCN4 374 aaPredicted RBP3.84□□□□□ -1.79
HDAC3-206ENST00000471968 MGAT4CQ9UBM8 478 aa3.84□□□□□ -1.79
HDAC3-206ENST00000471968 CARHSP1Q9Y2V2 147 aaKnown RBP3.84□□□□□ -1.79
HDAC3-206ENST00000471968 hDV102S1A0JD36 115 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 DISC1C4P0D8 188 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 PMP2P02689 132 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 SLPIP03973 132 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 KRTAP2-3P0C7H8 128 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 F2RP25116 425 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 Q0VG73 95 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 KLF9Q13886 244 aaPredicted RBP3.83□□□□□ -1.8
HDAC3-206ENST00000471968 MSMO1Q15800 293 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 SCGB2B2Q4G0G5 96 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 DNLZQ5SXM8 178 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 C10orf91Q5T1B1 145 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 STEAP1BQ6NZ63 245 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 TEPPQ6URK8 271 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 ALKAL2Q6UX46 152 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 ZNF818PQ6ZRF7 136 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 TMUB2Q71RG4 321 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 SMIM4Q8WVI0 70 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 RPUSD4Q96CM3 377 aaKnown RBP3.83□□□□□ -1.8
HDAC3-206ENST00000471968 C9orf85Q96MD7 179 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 KRTAP2-4Q9BYR9 128 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 PPDPFQ9H3Y8 114 aa3.83□□□□□ -1.8
HDAC3-206ENST00000471968 TMEM218A2RU14 115 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 C5orf52A6NGY3 159 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 H0Y9J4 135 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 GPR31O00270 319 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 MT-ND6P03923 174 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 RLN1P04808 185 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 SLC25A4P12235 298 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 PTHLHP12272 177 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 FAUP35544 74 aaKnown RBP3.82□□□□□ -1.8
HDAC3-206ENST00000471968 AKR1C2P52895 323 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 MRPS10P82664 201 aaKnown RBP3.82□□□□□ -1.8
HDAC3-206ENST00000471968 ZNF345Q14585 488 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 PHLDA2Q53GA4 152 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 C1orf137Q5JT78 98 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 LINC00337Q8N6G1 96 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 C15orf54Q8N8G6 183 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 BPIFCQ8NFQ6 507 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 OR4C5Q8NGB2 326 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 OR52I2Q8NH67 350 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 PRSS3P2Q8NHM4 247 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 ARL6Q9H0F7 186 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 ENY2Q9NPA8 101 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 NIT2Q9NQR4 276 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 AP5S1Q9NUS5 200 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 C14orf166Q9Y224 244 aaKnown RBP3.82□□□□□ -1.8
HDAC3-206ENST00000471968 TMEM56-RWDD3S4R434 201 aa3.82□□□□□ -1.8
HDAC3-206ENST00000471968 CRYM-AS1A6NIL9 109 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 C1orf196B1AJZ1 125 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 ARPC5O15511 151 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 NDUFS6O75380 124 aaKnown RBP3.81□□□□□ -1.8
HDAC3-206ENST00000471968 RAB3DO95716 219 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 CFC1P0CG37 223 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 TBPP20226 339 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 RAB4AP20338 218 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 LEPP41159 167 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 TAS2R19P59542 299 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 SPCS3P61009 180 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 ZNF90Q03938 601 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 SMCO1Q147U7 214 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 SS18Q15532 418 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 H2BFWTQ7Z2G1 175 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 SLC25A29Q8N8R3 303 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 OR10G9Q8NGN4 311 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 THAP6Q8TBB0 222 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 LINC00477Q96M19 166 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 SCGB3A2Q96PL1 93 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 SEC11CQ9BY50 192 aa3.81□□□□□ -1.8
HDAC3-206ENST00000471968 A0A087WX48 190 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 TRAV4A0A0B4J268 109 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 PIGBOS1A0A0B4J2F0 54 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 C9orf170A2RU37 121 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 C7orf71A4D174 169 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 PGPA6NDG6 321 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 INS-IGF2F8WCM5 200 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 GABARAPH6UMI1 98 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 BCL2L11O43521 198 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 SIX6O95475 246 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 CRPP02741 224 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 CD3DP04234 171 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 RAB5CP51148 216 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 RAB2AP61019 212 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 PEA15Q15121 130 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 ELOBQ15370 118 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 IZUMO4Q1ZYL8 232 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 ANKRD39Q53RE8 183 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 FAM74A1Q5RGS3 127 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 ENHOQ6UWT2 76 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 LINC00173Q6ZV60 143 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 TBC1D26Q86UD7 250 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 GPX8Q8TED1 209 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 PRADC1Q9BSG0 188 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 SMCO4Q9NRQ5 59 aa3.8□□□□□ -1.8
HDAC3-206ENST00000471968 FXYD6-FXYD2A0A087WZ82 144 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 A0A096LNI7 61 aa3.79□□□□□ -1.8
HDAC3-206ENST00000471968 KANTRA0A1W2PQU2 76 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms