RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 ZNF688P0C7X2 276 aa13.05□□□□□ -0.32
HSPG2-208ENST00000471322 EBLN2Q6P2I7 272 aa13.05□□□□□ -0.32
HSPG2-208ENST00000471322 APRG1Q8IVJ8 170 aa13.05□□□□□ -0.32
HSPG2-208ENST00000471322 ZFAND2AQ8N6M9 145 aa13.05□□□□□ -0.32
HSPG2-208ENST00000471322 F2Z2F3 143 aa13.04□□□□□ -0.32
HSPG2-208ENST00000471322 F6UB75 175 aa13.04□□□□□ -0.32
HSPG2-208ENST00000471322 DUSP14O95147 198 aaKnown RBP13.04□□□□□ -0.32
HSPG2-208ENST00000471322 CTRLP40313 264 aa13.04□□□□□ -0.32
HSPG2-208ENST00000471322 LYZL1Q6UWQ5 148 aa13.04□□□□□ -0.32
HSPG2-208ENST00000471322 GATD1Q8NB37 220 aa13.04□□□□□ -0.32
HSPG2-208ENST00000471322 TPPP3Q9BW30 176 aa13.04□□□□□ -0.32
HSPG2-208ENST00000471322 SIGLEC8Q9NYZ4 499 aa13.04□□□□□ -0.32
HSPG2-208ENST00000471322 TRAV25A0A0B4J276 109 aa13.03□□□□□ -0.32
HSPG2-208ENST00000471322 PRB2P02812 416 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-208ENST00000471322 GPX1P07203 203 aa13.03□□□□□ -0.32
HSPG2-208ENST00000471322 ARMS2P0C7Q2 107 aa13.03□□□□□ -0.32
HSPG2-208ENST00000471322 IGLC6P0CF74 106 aa13.03□□□□□ -0.32
HSPG2-208ENST00000471322 SLAQ13239 276 aa13.03□□□□□ -0.32
HSPG2-208ENST00000471322 OR10J3Q5JRS4 329 aa13.03□□□□□ -0.32
HSPG2-208ENST00000471322 GFI1BQ5VTD9 330 aa13.03□□□□□ -0.32
HSPG2-208ENST00000471322 A0A0J9YX75 114 aa13.02□□□□□ -0.32
HSPG2-208ENST00000471322 DEFB114Q30KQ6 69 aa13.02□□□□□ -0.32
HSPG2-208ENST00000471322 SAMD5Q5TGI4 173 aa13.02□□□□□ -0.32
HSPG2-208ENST00000471322 FOXI2Q6ZQN5 318 aa13.02□□□□□ -0.32
HSPG2-208ENST00000471322 LEPP41159 167 aa13.02□□□□□ -0.33
HSPG2-208ENST00000471322 DEFB1P60022 68 aa13.02□□□□□ -0.33
HSPG2-208ENST00000471322 DEFA6Q01524 100 aa13.02□□□□□ -0.33
HSPG2-208ENST00000471322 KIAA1644Q3SXP7 199 aa13.02□□□□□ -0.33
HSPG2-208ENST00000471322 IGKV3D-20A0A0C4DH25 116 aa13.01□□□□□ -0.33
HSPG2-208ENST00000471322 SRIP30626 198 aa13.01□□□□□ -0.33
HSPG2-208ENST00000471322 ZNF493Q6ZR52 646 aa13.01□□□□□ -0.33
HSPG2-208ENST00000471322 ZNF575Q86XF7 245 aa13.01□□□□□ -0.33
HSPG2-208ENST00000471322 BAGE3Q86Y29 109 aa13.01□□□□□ -0.33
HSPG2-208ENST00000471322 SSBP4Q9BWG4 385 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-208ENST00000471322 CNFNQ9BYD5 112 aa13.01□□□□□ -0.33
HSPG2-208ENST00000471322 DNAH3Q8TD57 4116 aa13□□□□□ -0.33
HSPG2-208ENST00000471322 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
HSPG2-208ENST00000471322 IFITM10A6NMD0 228 aa13□□□□□ -0.33
HSPG2-208ENST00000471322 KLLNB2CW77 178 aa13□□□□□ -0.33
HSPG2-208ENST00000471322 TSPOP30536 169 aa13□□□□□ -0.33
HSPG2-208ENST00000471322 RNASE4P34096 147 aaKnown RBP13□□□□□ -0.33
HSPG2-208ENST00000471322 TMEM61Q8N0U2 210 aa13□□□□□ -0.33
HSPG2-208ENST00000471322 SPAG8Q99932 426 aaPredicted RBP13□□□□□ -0.33
HSPG2-208ENST00000471322 C11orf21Q9P2W6 132 aa13□□□□□ -0.33
HSPG2-208ENST00000471322 PRKDCP78527 4128 aaKnown RBP12.99□□□□□ -0.33
HSPG2-208ENST00000471322 OR4C46A6NHA9 309 aa12.99□□□□□ -0.33
HSPG2-208ENST00000471322 PDZD11Q5EBL8 140 aa12.99□□□□□ -0.33
HSPG2-208ENST00000471322 PRR9Q5T870 116 aa12.99□□□□□ -0.33
HSPG2-208ENST00000471322 ESDP10768 282 aa12.99□□□□□ -0.33
HSPG2-208ENST00000471322 BEAN1Q3B7T3 259 aa12.99□□□□□ -0.33
HSPG2-208ENST00000471322 TMEM18Q96B42 140 aa12.99□□□□□ -0.33
HSPG2-208ENST00000471322 HIST1H2BLQ99880 126 aa12.99□□□□□ -0.33
HSPG2-208ENST00000471322 ALKBH7Q9BT30 221 aaPredicted RBP12.99□□□□□ -0.33
HSPG2-208ENST00000471322 LOC102724200A0A096LPH7 203 aaPredicted RBP12.98□□□□□ -0.33
HSPG2-208ENST00000471322 FABP4P15090 132 aa12.98□□□□□ -0.33
HSPG2-208ENST00000471322 TWIST1Q15672 202 aa12.98□□□□□ -0.33
HSPG2-208ENST00000471322 LINC00518Q8N0U6 118 aa12.98□□□□□ -0.33
HSPG2-208ENST00000471322 J3KRW8 73 aa12.97□□□□□ -0.33
HSPG2-208ENST00000471322 OR5AL1P0C617 328 aa12.97□□□□□ -0.33
HSPG2-208ENST00000471322 SMIM6P0DI80 62 aa12.97□□□□□ -0.33
HSPG2-208ENST00000471322 CD300EQ496F6 205 aaPredicted RBP12.97□□□□□ -0.33
HSPG2-208ENST00000471322 TMEM256Q8N2U0 113 aa12.97□□□□□ -0.33
HSPG2-208ENST00000471322 NTF3P20783 257 aa12.96□□□□□ -0.33
HSPG2-208ENST00000471322 CACNG7P62955 275 aa12.96□□□□□ -0.33
HSPG2-208ENST00000471322 AMBPP02760 352 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 MED14OSP0DP75 135 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 DEFB131AP59861 70 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 KRTAP10-11P60412 298 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 OR10D4PQ8NGN7 298 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 KCNS1Q96KK3 526 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 PACRGQ96M98 296 aaPredicted RBP12.95□□□□□ -0.34
HSPG2-208ENST00000471322 MCRIP2Q9BUT9 160 aaKnown RBP12.95□□□□□ -0.34
HSPG2-208ENST00000471322 NAGKQ9UJ70 344 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 TP53TG3Q9ULZ0 132 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 C7orf71A4D174 169 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 SNAI2O43623 268 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 SAP30O75446 220 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 SERF1AO75920 110 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 ASIPP42127 132 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 CDKN1BP46527 198 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 DNLZQ5SXM8 178 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 C18orf32Q8TCD1 76 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 TMEM191AQ9H0A3 160 aa12.95□□□□□ -0.34
HSPG2-208ENST00000471322 IGHV4-4A0A075B6R2 117 aa12.94□□□□□ -0.34
HSPG2-208ENST00000471322 HLA-DRB4P13762 266 aa12.94□□□□□ -0.34
HSPG2-208ENST00000471322 CMC4P56277 68 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-208ENST00000471322 FAM104BQ5XKR9 115 aa12.94□□□□□ -0.34
HSPG2-208ENST00000471322 HLA-DRB4X5D2U9 266 aa12.94□□□□□ -0.34
HSPG2-208ENST00000471322 A8MTW9 85 aa12.93□□□□□ -0.34
HSPG2-208ENST00000471322 S100A4P26447 101 aaKnown RBP12.93□□□□□ -0.34
HSPG2-208ENST00000471322 ANXA2RQ3ZCQ2 193 aa12.93□□□□□ -0.34
HSPG2-208ENST00000471322 KPRPQ5T749 579 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-208ENST00000471322 C9orf66Q5T8R8 295 aa12.93□□□□□ -0.34
HSPG2-208ENST00000471322 DMRTA1Q5VZB9 504 aa12.93□□□□□ -0.34
HSPG2-208ENST00000471322 FAM159AQ6UWV7 190 aa12.93□□□□□ -0.34
HSPG2-208ENST00000471322 SMIM15Q7Z3B0 74 aa12.93□□□□□ -0.34
HSPG2-208ENST00000471322 Q6ZQT7 251 aa12.92□□□□□ -0.34
HSPG2-208ENST00000471322 OR2K2Q8NGT1 345 aa12.92□□□□□ -0.34
HSPG2-208ENST00000471322 MAP6D1Q9H9H5 199 aa12.92□□□□□ -0.34
HSPG2-208ENST00000471322 ZNF256Q9Y2P7 627 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms