RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 BTN1A1Q13410 526 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 DEFB121Q5J5C9 76 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 GFI1BQ5VTD9 330 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 ATRAIDQ6UW56 229 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 FAM231DQ6ZW35 169 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 ISOC2Q96AB3 205 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 OSTCQ9NRP0 149 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 NBEAL1Q6ZS30 2694 aa4.32□□□□□ -1.72
USP39-213ENST00000467885 TRAV21A0A0B4J279 112 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 C7orf77A4D0Y5 90 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 B4DEV8 164 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 UBE2CO00762 179 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 APOC3P02656 99 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 PFN1P07737 140 aaKnown RBP4.31□□□□□ -1.72
USP39-213ENST00000467885 FRMD6-AS1P0C7T7 363 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 MGST1P10620 155 aaKnown RBP4.31□□□□□ -1.72
USP39-213ENST00000467885 FOXA3P55318 350 aaPredicted RBP4.31□□□□□ -1.72
USP39-213ENST00000467885 PNRC1Q12796 327 aaPredicted RBP4.31□□□□□ -1.72
USP39-213ENST00000467885 TDRG1Q3Y452 100 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 ANXA2RQ3ZCQ2 193 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 FAM162BQ5T6X4 162 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 ZNF705AQ6ZN79 300 aaPredicted RBP4.31□□□□□ -1.72
USP39-213ENST00000467885 SBSPONQ8IVN8 264 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 C20orf144Q9BQM9 153 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 LINC00467Q9BRT7 94 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 NIPSNAP3BQ9BS92 247 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 NDFIP1Q9BT67 221 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 RNASE7Q9H1E1 156 aaKnown RBP4.31□□□□□ -1.72
USP39-213ENST00000467885 TP53TG3Q9ULZ0 132 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 V9GYV3 84 aa4.31□□□□□ -1.72
USP39-213ENST00000467885 AGRNO00468 2067 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 SPRY2O43597 315 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 ORM1P02763 201 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 S100A1P23297 94 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 ERVFC1-1P60608 527 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 ADIRFQ15847 76 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 RNF212Q495C1 297 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 DNLZQ5SXM8 178 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 PRR27Q6MZM9 219 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 Q6ZWC4 215 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 OR10G8Q8NGN5 311 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 RNF183Q96D59 192 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 DAZAP1Q96EP5 407 aaKnown RBP4.3□□□□□ -1.72
USP39-213ENST00000467885 SFRP2Q96HF1 295 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 LINC01587Q99440 93 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 C1QTNF4Q9BXJ3 329 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 BIN3Q9NQY0 253 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 TMEM242Q9NWH2 141 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 MDFICQ9P1T7 246 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 X6R8D5 127 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 NOTCH1P46531 2555 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 NBEAL2Q6ZNJ1 2754 aa4.3□□□□□ -1.72
USP39-213ENST00000467885 IGHV1OR15-1A0A075B7D0 117 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 A0A087WWC5 75 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 SMIM27A0A1W2PRY6 76 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 GRIFINA4D1Z8 144 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 TMEM189A5PLL7 270 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 ZNF705GA8MUZ8 300 aaPredicted RBP4.29□□□□□ -1.72
USP39-213ENST00000467885 H7BYZ3 331 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 GATCO43716 136 aaKnown RBP4.29□□□□□ -1.72
USP39-213ENST00000467885 ATP6V1G1O75348 118 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 CA1P00915 261 aaPredicted RBP4.29□□□□□ -1.72
USP39-213ENST00000467885 MT-ND4LP03901 98 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 GZMBP10144 247 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 APOC4P55056 127 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 RPL19P84098 196 aaKnown RBP4.29□□□□□ -1.72
USP39-213ENST00000467885 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 MUC21Q5SSG8 566 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 IBA57Q5T440 356 aaKnown RBP4.29□□□□□ -1.72
USP39-213ENST00000467885 LCE5AQ5TCM9 118 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 OR2D3Q8NGH3 330 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 GTSF1Q8WW33 167 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 NEU1Q99519 415 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 OVOL2Q9BRP0 275 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 PYGO2Q9BRQ0 406 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 CTDSP1Q9GZU7 261 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 SCRT2Q9NQ03 307 aa4.29□□□□□ -1.72
USP39-213ENST00000467885 IGHV3-16A0A0C4DH30 117 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 FAM231BA6NCW3 169 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 SMIM9A6NGZ8 99 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 A8MWL6 223 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 M0R036 132 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 PPP1R2P9O14990 202 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 SNAPINO95295 136 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 P01737 135 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 ARMS2P0C7Q2 107 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 IGLC6P0CF74 106 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 RNASE3P12724 160 aaKnown RBP4.28□□□□□ -1.72
USP39-213ENST00000467885 FAM3BP58499 235 aaPredicted RBP4.28□□□□□ -1.72
USP39-213ENST00000467885 DEFA6Q01524 100 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 ANKRD39Q53RE8 183 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 CT83Q5H943 113 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 FAM159AQ6UWV7 190 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 TMEM256Q8N2U0 113 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 SVBPQ8N300 66 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 C15orf54Q8N8G6 183 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 KCNS1Q96KK3 526 aa4.28□□□□□ -1.72
USP39-213ENST00000467885 RPP21Q9H633 154 aaKnown RBP4.28□□□□□ -1.72
USP39-213ENST00000467885 RPS10P5Q9NQ39 176 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 211.2 ms