RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 NCOR1O75376 2440 aa-0.72□□□□□ -2.52
SMC4-207ENST00000467263 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.72□□□□□ -2.52
SMC4-207ENST00000467263 AP3S1Q92572 193 aa-0.72□□□□□ -2.52
SMC4-207ENST00000467263 SMIM7Q9BQ49 75 aa-0.72□□□□□ -2.52
SMC4-207ENST00000467263 ATG5Q9H1Y0 275 aa-0.72□□□□□ -2.52
SMC4-207ENST00000467263 STOML2Q9UJZ1 356 aa-0.72□□□□□ -2.52
SMC4-207ENST00000467263 BLMP54132 1417 aaPredicted RBP-0.72□□□□□ -2.53
SMC4-207ENST00000467263 BLCAPP62952 87 aa-0.73□□□□□ -2.53
SMC4-207ENST00000467263 IDO2Q6ZQW0 420 aa-0.73□□□□□ -2.53
SMC4-207ENST00000467263 MORN4Q8NDC4 146 aa-0.73□□□□□ -2.53
SMC4-207ENST00000467263 OR51A4Q8NGJ6 313 aa-0.73□□□□□ -2.53
SMC4-207ENST00000467263 FAM135BQ49AJ0 1406 aa-0.73□□□□□ -2.53
SMC4-207ENST00000467263 MYH1P12882 1939 aa-0.74□□□□□ -2.53
SMC4-207ENST00000467263 TNS1Q9HBL0 1735 aaKnown RBP-0.74□□□□□ -2.53
SMC4-207ENST00000467263 TRAV13-1A0A0B4J241 112 aa-0.74□□□□□ -2.53
SMC4-207ENST00000467263 IFITM1P13164 125 aa-0.74□□□□□ -2.53
SMC4-207ENST00000467263 OR5A2Q8NGI9 324 aa-0.74□□□□□ -2.53
SMC4-207ENST00000467263 SOGA1O94964 1423 aa-0.74□□□□□ -2.53
SMC4-207ENST00000467263 C9JAW5 83 aa-0.75□□□□□ -2.53
SMC4-207ENST00000467263 H3BMG7 143 aa-0.75□□□□□ -2.53
SMC4-207ENST00000467263 E2F6O75461 281 aa-0.75□□□□□ -2.53
SMC4-207ENST00000467263 DCUN1D2Q6PH85 259 aa-0.75□□□□□ -2.53
SMC4-207ENST00000467263 HOPXQ9BPY8 73 aaPredicted RBP-0.75□□□□□ -2.53
SMC4-207ENST00000467263 LAMTOR2Q9Y2Q5 125 aa-0.75□□□□□ -2.53
SMC4-207ENST00000467263 F2Z2F3 143 aa-0.76□□□□□ -2.53
SMC4-207ENST00000467263 CRYGSP22914 178 aa-0.76□□□□□ -2.53
SMC4-207ENST00000467263 SERPINB1P30740 379 aa-0.76□□□□□ -2.53
SMC4-207ENST00000467263 UNQ5815/PRO19632Q6UWF5 114 aa-0.76□□□□□ -2.53
SMC4-207ENST00000467263 EIF3AQ14152 1382 aaKnown RBP-0.76□□□□□ -2.53
SMC4-207ENST00000467263 YTHDC2Q9H6S0 1430 aaKnown RBP-0.76□□□□□ -2.53
SMC4-207ENST00000467263 UNC13BO14795 1591 aa-0.76□□□□□ -2.53
SMC4-207ENST00000467263 MAP1LC3B2A6NCE7 125 aa-0.77□□□□□ -2.53
SMC4-207ENST00000467263 C10orf142B7Z368 130 aa-0.77□□□□□ -2.53
SMC4-207ENST00000467263 MCRIP1C9JLW8 97 aa-0.77□□□□□ -2.53
SMC4-207ENST00000467263 CKS2P33552 79 aa-0.78□□□□□ -2.53
SMC4-207ENST00000467263 C3orf33Q6P1S2 294 aa-0.78□□□□□ -2.53
SMC4-207ENST00000467263 HRCT1Q6UXD1 115 aa-0.78□□□□□ -2.53
SMC4-207ENST00000467263 TMEM141Q96I45 108 aa-0.78□□□□□ -2.53
SMC4-207ENST00000467263 LXNQ9BS40 222 aa-0.78□□□□□ -2.53
SMC4-207ENST00000467263 LAMC3Q9Y6N6 1575 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 FER1L6Q2WGJ9 1857 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 IGHV1-24A0A0C4DH33 117 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 M0QZK8 103 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 PYYP10082 97 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 SDC4P31431 198 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 SRP9P49458 86 aaKnown RBP-0.79□□□□□ -2.54
SMC4-207ENST00000467263 CRYBA4P53673 196 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 MRPS15P82914 257 aaKnown RBP-0.79□□□□□ -2.54
SMC4-207ENST00000467263 OTOSQ8NHW6 89 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 COA4Q9NYJ1 87 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 LRP5O75197 1615 aa-0.79□□□□□ -2.54
SMC4-207ENST00000467263 TRBV10-1A0A0K0K1A3 114 aa-0.8□□□□□ -2.54
SMC4-207ENST00000467263 POLR2JP52435 117 aaKnown RBP-0.8□□□□□ -2.54
SMC4-207ENST00000467263 STX12Q86Y82 276 aa-0.8□□□□□ -2.54
SMC4-207ENST00000467263 CCDC32Q9BV29 185 aa-0.8□□□□□ -2.54
SMC4-207ENST00000467263 GID8Q9NWU2 228 aa-0.8□□□□□ -2.54
SMC4-207ENST00000467263 FLNAP21333 2647 aaKnown RBP-0.8□□□□□ -2.54
SMC4-207ENST00000467263 ZNF292O60281 2723 aa-0.8□□□□□ -2.54
SMC4-207ENST00000467263 HSPG2P98160 4391 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 KMT2AQ03164 3969 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 SYNMO15061 1565 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 TRBV7-6A0A0J9YX20 115 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 PPP5D1E7EU14 171 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 HBDP02042 147 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 TFF1P04155 84 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 NMBP08949 121 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 ADCYAP1P18509 176 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 EMX2Q04743 252 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 BPESC1Q9GZL8 116 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 CBLN4Q9NTU7 201 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 MED31Q9Y3C7 131 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 FAM208BQ5VWN6 2430 aa-0.81□□□□□ -2.54
SMC4-207ENST00000467263 TEX49A0A1B0GTD5 131 aa-0.82□□□□□ -2.54
SMC4-207ENST00000467263 LSM3P62310 102 aaKnown RBP-0.82□□□□□ -2.54
SMC4-207ENST00000467263 BRK1Q8WUW1 75 aa-0.82□□□□□ -2.54
SMC4-207ENST00000467263 NAT14Q8WUY8 206 aa-0.82□□□□□ -2.54
SMC4-207ENST00000467263 BOLA2Q9H3K6 86 aa-0.82□□□□□ -2.54
SMC4-207ENST00000467263 TRAPPC2LQ9UL33 140 aa-0.82□□□□□ -2.54
SMC4-207ENST00000467263 PTPRGP23470 1445 aa-0.82□□□□□ -2.54
SMC4-207ENST00000467263 KIDINS220Q9ULH0 1771 aa-0.83□□□□□ -2.54
SMC4-207ENST00000467263 CDK13Q14004 1512 aaKnown RBP-0.83□□□□□ -2.54
SMC4-207ENST00000467263 TRAV17A0A0B4J275 112 aa-0.83□□□□□ -2.54
SMC4-207ENST00000467263 LOC107984640A0A0U1RRK4 108 aa-0.83□□□□□ -2.54
SMC4-207ENST00000467263 ELOF1P60002 83 aaKnown RBP-0.83□□□□□ -2.54
SMC4-207ENST00000467263 TMEM78Q5T7P6 136 aa-0.83□□□□□ -2.54
SMC4-207ENST00000467263 OR4S1Q8NGB4 309 aa-0.83□□□□□ -2.54
SMC4-207ENST00000467263 PPP1R1CQ8WVI7 109 aa-0.83□□□□□ -2.54
SMC4-207ENST00000467263 BET1LQ9NYM9 111 aa-0.83□□□□□ -2.54
SMC4-207ENST00000467263 CSMD3Q7Z407 3707 aa-0.83□□□□□ -2.54
SMC4-207ENST00000467263 PTPN13Q12923 2485 aa-0.83□□□□□ -2.54
SMC4-207ENST00000467263 STAB1Q9NY15 2570 aa-0.84□□□□□ -2.54
SMC4-207ENST00000467263 VIRMAQ69YN4 1812 aaKnown RBP-0.84□□□□□ -2.54
SMC4-207ENST00000467263 PKD1L1Q8TDX9 2849 aa-0.84□□□□□ -2.54
SMC4-207ENST00000467263 TRAV12-2A0A075B6T6 113 aa-0.84□□□□□ -2.54
SMC4-207ENST00000467263 OR2H2O95918 312 aa-0.84□□□□□ -2.54
SMC4-207ENST00000467263 APOC1P02654 83 aa-0.84□□□□□ -2.54
SMC4-207ENST00000467263 HELZP42694 1942 aaKnown RBP-0.84□□□□□ -2.54
SMC4-207ENST00000467263 GVQW2A0A096LPI5 108 aaPredicted RBP-0.85□□□□□ -2.55
SMC4-207ENST00000467263 A0A1W2PRE2 83 aa-0.85□□□□□ -2.55
SMC4-207ENST00000467263 TMEM238C9JI98 176 aa-0.85□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms