RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 C10orf99Q6UWK7 81 aa14.18□□□□□ -0.14
TSPAN4-210ENST00000464987 SRD5A1P18405 259 aa14.17□□□□□ -0.14
TSPAN4-210ENST00000464987 MAP1LC3AQ9H492 121 aa14.17□□□□□ -0.14
TSPAN4-210ENST00000464987 H3BVH4 76 aa14.17□□□□□ -0.14
TSPAN4-210ENST00000464987 SNAI2O43623 268 aa14.17□□□□□ -0.14
TSPAN4-210ENST00000464987 BRI3O95415 125 aa14.17□□□□□ -0.14
TSPAN4-210ENST00000464987 IGHV4-59P01825 116 aa14.17□□□□□ -0.14
TSPAN4-210ENST00000464987 CFHR3Q02985 330 aa14.17□□□□□ -0.14
TSPAN4-210ENST00000464987 ZFAND2AQ8N6M9 145 aa14.17□□□□□ -0.14
TSPAN4-210ENST00000464987 C18orf15Q96N68 181 aa14.17□□□□□ -0.14
TSPAN4-210ENST00000464987 DEFB112Q30KQ8 113 aa14.16□□□□□ -0.14
TSPAN4-210ENST00000464987 RHPN1-AS1Q9BWJ2 59 aa14.16□□□□□ -0.14
TSPAN4-210ENST00000464987 UFC1Q9Y3C8 167 aa14.16□□□□□ -0.14
TSPAN4-210ENST00000464987 ZNF462Q96JM2 2506 aa14.16□□□□□ -0.14
TSPAN4-210ENST00000464987 IFI27L1Q96BM0 104 aa14.15□□□□□ -0.14
TSPAN4-210ENST00000464987 MS4A6AQ9H2W1 248 aa14.15□□□□□ -0.14
TSPAN4-210ENST00000464987 ZNF469Q96JG9 3925 aaPredicted RBP14.15□□□□□ -0.14
TSPAN4-210ENST00000464987 NUDT3O95989 172 aa14.14□□□□□ -0.15
TSPAN4-210ENST00000464987 LEPP41159 167 aa14.14□□□□□ -0.15
TSPAN4-210ENST00000464987 SPANXN1Q5VSR9 72 aa14.14□□□□□ -0.15
TSPAN4-210ENST00000464987 SMIM15Q7Z3B0 74 aa14.14□□□□□ -0.15
TSPAN4-210ENST00000464987 CHTOPQ9Y3Y2 248 aaKnown RBP14.14□□□□□ -0.15
TSPAN4-210ENST00000464987 LGALS9BQ3B8N2 356 aa14.13□□□□□ -0.15
TSPAN4-210ENST00000464987 LGALS9CQ6DKI2 356 aa14.13□□□□□ -0.15
TSPAN4-210ENST00000464987 OR10J6PQ8NGY7 276 aa14.13□□□□□ -0.15
TSPAN4-210ENST00000464987 LINC00477Q96M19 166 aa14.13□□□□□ -0.15
TSPAN4-210ENST00000464987 A0A096LNT2 108 aa14.13□□□□□ -0.15
TSPAN4-210ENST00000464987 DKK2Q9UBU2 259 aa14.13□□□□□ -0.15
TSPAN4-210ENST00000464987 IGLV2-18A0A075B6J9 118 aa14.12□□□□□ -0.15
TSPAN4-210ENST00000464987 A0A0G2JLM5 398 aa14.12□□□□□ -0.15
TSPAN4-210ENST00000464987 LINC01546A6NGU7 62 aa14.12□□□□□ -0.15
TSPAN4-210ENST00000464987 COX8AP10176 69 aa14.12□□□□□ -0.15
TSPAN4-210ENST00000464987 LENEPQ9Y5L5 61 aa14.12□□□□□ -0.15
TSPAN4-210ENST00000464987 MXRA5Q9NR99 2828 aa14.12□□□□□ -0.15
TSPAN4-210ENST00000464987 LRRK2Q5S007 2527 aa14.12□□□□□ -0.15
TSPAN4-210ENST00000464987 NRACQ8N912 160 aa14.11□□□□□ -0.15
TSPAN4-210ENST00000464987 OR2K2Q8NGT1 345 aa14.11□□□□□ -0.15
TSPAN4-210ENST00000464987 DAZ1Q9NQZ3 744 aaKnown RBP14.11□□□□□ -0.15
TSPAN4-210ENST00000464987 COX11Q9Y6N1 276 aa14.11□□□□□ -0.15
TSPAN4-210ENST00000464987 MUC4Q99102 2169 aa14.11□□□□□ -0.15
TSPAN4-210ENST00000464987 CR1P17927 2039 aa14.11□□□□□ -0.15
TSPAN4-210ENST00000464987 A1L4Q6 167 aa14.11□□□□□ -0.15
TSPAN4-210ENST00000464987 OVOL1O14753 267 aa14.11□□□□□ -0.15
TSPAN4-210ENST00000464987 C2orf91Q6ZV80 131 aa14.11□□□□□ -0.15
TSPAN4-210ENST00000464987 IGHV4-4A0A075B6R2 117 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 BVES-AS1Q5T3Y7 98 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 LINC01356Q8N9X3 169 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 FAM19A4Q96LR4 140 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 NXT2Q9NPJ8 142 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 PEF1Q9UBV8 284 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 AGRNO00468 2067 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 TGFAP01135 160 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 PSMB8P28062 276 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 FCER1GP30273 86 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 RNASE4P34096 147 aaKnown RBP14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 SRSF1Q07955 248 aaKnown RBP eCLIP14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 ANXA2RQ3ZCQ2 193 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 SVIPQ8NHG7 77 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 TMEM158Q8WZ71 300 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 SMPXQ9UHP9 88 aa14.1□□□□□ -0.15
TSPAN4-210ENST00000464987 NBPF19A0A087WUL8 3843 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 M0R381 172 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 FGF6P10767 208 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 WFDC12Q8WWY7 111 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 TRAV21A0A0B4J279 112 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 SLC25A16P16260 332 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 GATA3P23771 443 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 DSCR9P59020 149 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 ERASQ7Z444 233 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 ZNF843Q8N446 348 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 Q8N8P6 123 aa14.09□□□□□ -0.15
TSPAN4-210ENST00000464987 SORL1Q92673 2214 aa14.08□□□□□ -0.15
TSPAN4-210ENST00000464987 PTPN13Q12923 2485 aa14.08□□□□□ -0.16
TSPAN4-210ENST00000464987 GNRH2O43555 120 aa14.08□□□□□ -0.16
TSPAN4-210ENST00000464987 RNF151Q2KHN1 245 aa14.08□□□□□ -0.16
TSPAN4-210ENST00000464987 KRTAP10-9P60411 292 aa14.06□□□□□ -0.16
TSPAN4-210ENST00000464987 CD5LO43866 347 aa14.06□□□□□ -0.16
TSPAN4-210ENST00000464987 S100A4P26447 101 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-210ENST00000464987 DCANP1Q8TF63 244 aa14.06□□□□□ -0.16
TSPAN4-210ENST00000464987 ABCA12Q86UK0 2595 aa14.06□□□□□ -0.16
TSPAN4-210ENST00000464987 RNF223E7ERA6 249 aa14.05□□□□□ -0.16
TSPAN4-210ENST00000464987 UBR5O95071 2799 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-210ENST00000464987 TEX15Q9BXT5 2789 aa14.05□□□□□ -0.16
TSPAN4-210ENST00000464987 CIDEAO60543 219 aa14.05□□□□□ -0.16
TSPAN4-210ENST00000464987 ODF1Q14990 250 aa14.05□□□□□ -0.16
TSPAN4-210ENST00000464987 C14orf178Q8N769 122 aaPredicted RBP14.05□□□□□ -0.16
TSPAN4-210ENST00000464987 OR4C5Q8NGB2 326 aa14.05□□□□□ -0.16
TSPAN4-210ENST00000464987 RNASE3P12724 160 aaKnown RBP14.04□□□□□ -0.16
TSPAN4-210ENST00000464987 ASIPP42127 132 aa14.04□□□□□ -0.16
TSPAN4-210ENST00000464987 PCP2Q8IVA1 136 aa14.04□□□□□ -0.16
TSPAN4-210ENST00000464987 APRG1Q8IVJ8 170 aa14.04□□□□□ -0.16
TSPAN4-210ENST00000464987 DPF1Q92782 380 aa14.04□□□□□ -0.16
TSPAN4-210ENST00000464987 TAX1BP3O14907 124 aa14.03□□□□□ -0.16
TSPAN4-210ENST00000464987 CSTL1Q9H114 145 aa14.03□□□□□ -0.16
TSPAN4-210ENST00000464987 PHLDA3Q9Y5J5 127 aa14.03□□□□□ -0.16
TSPAN4-210ENST00000464987 CBY3A6NI87 242 aa14.03□□□□□ -0.16
TSPAN4-210ENST00000464987 PRSS47A8MTI9 375 aa14.03□□□□□ -0.16
TSPAN4-210ENST00000464987 K7EMT4 169 aa14.03□□□□□ -0.16
TSPAN4-210ENST00000464987 PRSS1P07477 247 aa14.03□□□□□ -0.16
TSPAN4-210ENST00000464987 SMIM17P0DL12 118 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms