RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 DPH3P1Q9H4G8 78 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 CUL9Q8IWT3 2517 aa5.57□□□□□ -1.52
USP48-206ENST00000464577 IGHV1-69DA0A0B4J2H0 117 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 PRSS29PA6NIE9 313 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 CD7P09564 240 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 RPL32P62910 135 aaKnown RBP5.56□□□□□ -1.52
USP48-206ENST00000464577 PAPPA-AS1Q5QFB9 102 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 C2orf66Q6UXQ4 117 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 DEFB123Q8N688 67 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 Q8N9W7 124 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 CCDC140Q96MF4 163 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 METTL26Q96S19 204 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 GEMIN7Q9H840 131 aaKnown RBP5.56□□□□□ -1.52
USP48-206ENST00000464577 SH3BGRL2Q9UJC5 107 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 NCOR1O75376 2440 aa5.56□□□□□ -1.52
USP48-206ENST00000464577 TRBV20-1A0A075B6N2 111 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 IGHV3-35A0A0C4DH35 117 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 CLEC3BP05452 202 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 HERVK_113P61574 105 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 SCGB1D4Q6XE38 83 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 C9orf139Q6ZV77 190 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 NFE4Q86UQ8 179 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 TEN1Q86WV5 123 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 POM121L12Q8N7R1 296 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 ITLN2Q8WWU7 325 aaPredicted RBP5.55□□□□□ -1.52
USP48-206ENST00000464577 EEF1AKMT3Q96AZ1 226 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 PLEKHB2Q96CS7 222 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 CLUHP3Q96NS8 147 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 COL6A3P12111 3177 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 PRRC2CQ9Y520 2896 aaKnown RBP5.55□□□□□ -1.52
USP48-206ENST00000464577 TRBV7-1A0A0A6YYK4 115 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 M0QXV9 152 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 SPINK8P0C7L1 97 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 PSMB2P49721 201 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 SRSF9Q13242 221 aaKnown RBP eCLIP5.55□□□□□ -1.52
USP48-206ENST00000464577 PRR9Q5T870 116 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 Q6ZUT4 128 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 KLK15Q9H2R5 256 aa5.55□□□□□ -1.52
USP48-206ENST00000464577 TRAV26-1A0A087WT03 109 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 TRAV21A0A0B4J279 112 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 IGHV3-66A0A0C4DH42 116 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 A0A0J9YY99 117 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 AVPP01185 164 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 ASIPP42127 132 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 NDUFA11Q86Y39 141 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 Q8NA96 180 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 RPL39LQ96EH5 51 aaKnown RBP5.54□□□□□ -1.52
USP48-206ENST00000464577 LINC00477Q96M19 166 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 VKORC1Q9BQB6 163 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 AGRNO00468 2067 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 IGLV4-69A0A075B6H9 119 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 LOC107984156A0A0G2JMH3 177 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 ATP6V0E1O15342 81 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 NXPH4O95158 308 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 MT-ATP8P03928 68 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 XGP55808 180 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 FHL3Q13643 280 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 ECSCRQ19T08 205 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 CLEC19AQ6UXS0 136 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 Q6ZQT7 251 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 ARL17AQ8IVW1 177 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 ZFAND2AQ8N6M9 145 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 GLMPQ8WWB7 406 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 CARD19Q96LW7 228 aa5.54□□□□□ -1.52
USP48-206ENST00000464577 A8MWV9 139 aa5.53□□□□□ -1.52
USP48-206ENST00000464577 OVOL1O14753 267 aa5.53□□□□□ -1.52
USP48-206ENST00000464577 CRYGDP07320 174 aa5.53□□□□□ -1.52
USP48-206ENST00000464577 FBXL19-AS1Q494R0 122 aa5.53□□□□□ -1.52
USP48-206ENST00000464577 ZFP2Q6ZN57 461 aa5.53□□□□□ -1.52
USP48-206ENST00000464577 APRG1Q8IVJ8 170 aa5.53□□□□□ -1.52
USP48-206ENST00000464577 TMEM141Q96I45 108 aa5.53□□□□□ -1.52
USP48-206ENST00000464577 C16orf92Q96LL3 132 aa5.53□□□□□ -1.52
USP48-206ENST00000464577 IGHV4OR15-8A0A075B7B6 117 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 A0A087WW49 117 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 TRBV7-9A0A0J9YWB2 115 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 C11orf86A6NJI1 115 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 TMEM262E9PQX1 116 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 TCL1BO95988 128 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 IGHV3-30P01768 117 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 ZNF688P0C7X2 276 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 IGHV3-30-5P0DP03 117 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 S100A4P26447 101 aaKnown RBP5.52□□□□□ -1.53
USP48-206ENST00000464577 PMVKQ15126 192 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 GPHB5Q86YW7 130 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 C10orf126Q8N4M7 172 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 C14orf178Q8N769 122 aaPredicted RBP5.52□□□□□ -1.53
USP48-206ENST00000464577 C20orf173Q96LM9 149 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 FAM19A4Q96LR4 140 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 TIMM17AQ99595 171 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 ERG28Q9UKR5 140 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 PHLDA3Q9Y5J5 127 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 TNRC18O15417 2968 aaPredicted RBP5.52□□□□□ -1.53
USP48-206ENST00000464577 IGHV3OR16-13A0A075B7E8 117 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 IGHV3-74A0A0B4J1X5 117 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 IGIPA6NJ69 53 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 DUSP14O95147 198 aaKnown RBP5.52□□□□□ -1.53
USP48-206ENST00000464577 TSHBP01222 138 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 MGPP08493 103 aa5.52□□□□□ -1.53
USP48-206ENST00000464577 CFAP161Q6P656 301 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms