RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	ZNF492	Q9P255	531 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	HHLA3	Q9XRX5	114 aa		7.52	□□□□□ -1.21
PTPN7-204	ENST00000462815	LRCOL1	A6NCL2	159 aa		7.51	□□□□□ -1.21
PTPN7-204	ENST00000462815	C17orf112	F2Z3M2	114 aa		7.51	□□□□□ -1.21
PTPN7-204	ENST00000462815	HAMP	P81172	84 aa		7.51	□□□□□ -1.21
PTPN7-204	ENST00000462815	SERF2	P84101	59 aa		7.51	□□□□□ -1.21
PTPN7-204	ENST00000462815	MRPL23	Q16540	153 aa	Known RBP	7.51	□□□□□ -1.21
PTPN7-204	ENST00000462815	TMED6	Q8WW62	240 aa		7.51	□□□□□ -1.21
PTPN7-204	ENST00000462815	MRPL32	Q9BYC8	188 aa	Known RBP	7.51	□□□□□ -1.21
PTPN7-204	ENST00000462815	MSRB1	Q9NZV6	116 aa		7.51	□□□□□ -1.21
PTPN7-204	ENST00000462815	LY96	Q9Y6Y9	160 aa		7.51	□□□□□ -1.21
PTPN7-204	ENST00000462815	TRBV7-9	A0A0J9YWB2	115 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815		K7EP13	123 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	GPX1	P07203	203 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	GCSH	P23434	173 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	SLA	Q13239	276 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	FFAR4	Q5NUL3	377 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	TEX261	Q6UWH6	196 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	NEGR1	Q7Z3B1	354 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	OR10G4	Q8NGN3	311 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815		Q8TAT8	98 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	PHYHIPL	Q96FC7	376 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	ZNF479	Q96JC4	524 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	KCNIP2	Q9NS61	270 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	UBR4	Q5T4S7	5183 aa		7.5	□□□□□ -1.21
PTPN7-204	ENST00000462815	SFTA3	P0C7M3	94 aa		7.49	□□□□□ -1.21
PTPN7-204	ENST00000462815	RAB2A	P61019	212 aa		7.49	□□□□□ -1.21
PTPN7-204	ENST00000462815	FAM122C	Q6P4D5	195 aa		7.49	□□□□□ -1.21
PTPN7-204	ENST00000462815	ALKAL2	Q6UX46	152 aa		7.49	□□□□□ -1.21
PTPN7-204	ENST00000462815	BLNK	Q8WV28	456 aa		7.49	□□□□□ -1.21
PTPN7-204	ENST00000462815	RASL10A	Q92737	203 aa		7.49	□□□□□ -1.21
PTPN7-204	ENST00000462815	FXYD5	Q96DB9	178 aa		7.49	□□□□□ -1.21
PTPN7-204	ENST00000462815	RGS13	O14921	159 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	MB	P02144	154 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	SULT1A2	P50226	295 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	ZNF138	P52744	262 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	ZNF415	Q09FC8	603 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	ACOT6	Q3I5F7	207 aa	Predicted RBP	7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	TMEM78	Q5T7P6	136 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	EIF5AL1	Q6IS14	154 aa	Known RBP	7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	MIR17HG	Q75NE6	70 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	OR10G9	Q8NGN4	311 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	OR10G7	Q8NGN6	311 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	TMEM70	Q9BUB7	260 aa		7.48	□□□□□ -1.21
PTPN7-204	ENST00000462815	PKHD1L1	Q86WI1	4243 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	TRAV9-2	A0A087WT02	112 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	UMAD1	C9J7I0	102 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	FAM229A	H3BQW9	127 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815		J3QL48	77 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	GYPE	P15421	78 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	SRI	P30626	198 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	FHIT	P49789	147 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	ZNF726P1	Q15940	193 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	FAM74A1	Q5RGS3	127 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	AKR1C8P	Q5T2L2	129 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815		Q6AWC8	147 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	FAM30A	Q9NZY2	134 aa		7.47	□□□□□ -1.21
PTPN7-204	ENST00000462815	TRGV4	A0A0C4DH28	118 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	LOC100131303	A0A0U1RQF7	123 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	EIF3G	O75821	320 aa	Known RBP eCLIP	7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	IFNA7	P01567	189 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	NBEAP1	P0C6P0	100 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	EVI2A	P22794	236 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	RAB5C	P51148	216 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	TIRAP	P58753	221 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	TDRG1	Q3Y452	100 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	MUC21	Q5SSG8	566 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	DPPA3	Q6W0C5	159 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815		Q6ZSN1	163 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	MBD3L1	Q8WWY6	194 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	AAMDC	Q9H7C9	122 aa		7.46	□□□□□ -1.22
PTPN7-204	ENST00000462815	RBAKDN	A6NC62	111 aa		7.45	□□□□□ -1.22
PTPN7-204	ENST00000462815	ORM1	P02763	201 aa		7.45	□□□□□ -1.22
PTPN7-204	ENST00000462815	CRYGD	P07320	174 aa		7.45	□□□□□ -1.22
PTPN7-204	ENST00000462815	OR10J4	P0C629	311 aa		7.45	□□□□□ -1.22
PTPN7-204	ENST00000462815	NTN5	Q8WTR8	489 aa	Predicted RBP	7.45	□□□□□ -1.22
PTPN7-204	ENST00000462815	RAB24	Q969Q5	203 aa		7.45	□□□□□ -1.22
PTPN7-204	ENST00000462815	ACTR3C	Q9C0K3	210 aa	Predicted RBP	7.45	□□□□□ -1.22
PTPN7-204	ENST00000462815	OR51M1	Q9H341	326 aa		7.45	□□□□□ -1.22
PTPN7-204	ENST00000462815	IGLV5-52	A0A0A0MRZ9	124 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	TRAV4	A0A0B4J268	109 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	CTXND1	A0A1B0GTU2	59 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	STAG3L2	P0CL84	134 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	STAG3L3	P0CL85	134 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	CDC34	P49427	236 aa	Predicted RBP	7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	TMEM183B	Q1AE95	376 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	LINC01556	Q5JQF7	62 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815		Q6ZSA8	131 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	TMEM183A	Q8IXX5	376 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	C10orf126	Q8N4M7	172 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815		Q8N814	137 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	FAM213B	Q8TBF2	198 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	SPX	Q9BT56	116 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	PAXX	Q9BUH6	204 aa		7.44	□□□□□ -1.22
PTPN7-204	ENST00000462815	IGHV3-16	A0A0C4DH30	117 aa		7.43	□□□□□ -1.22
PTPN7-204	ENST00000462815		A0A1W2PPV4	95 aa		7.43	□□□□□ -1.22
PTPN7-204	ENST00000462815	IBA57-AS1	B1ANH7	110 aa		7.43	□□□□□ -1.22
PTPN7-204	ENST00000462815	HMGB3	O15347	200 aa	Known RBP	7.43	□□□□□ -1.22
PTPN7-204	ENST00000462815	GATA1	P15976	413 aa	Predicted RBP	7.43	□□□□□ -1.22
PTPN7-204	ENST00000462815	WFDC2	Q14508	124 aa		7.43	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms