RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 SPATA3Q8NHX4 192 aa11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 BTF3L4Q96K17 158 aa11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 CITED1Q99966 193 aa11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 C11orf21Q9P2W6 132 aa11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 CHTOPQ9Y3Y2 248 aaKnown RBP11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 TRAV9-1A0A075B6T8 112 aa11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 TMSB15BA0A087X1C1 80 aa11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 TRAV2A0A0B4J234 112 aa11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 HIGD1CA8MV81 97 aa11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 A8MWL6 223 aa11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 ZNF256Q9Y2P7 627 aaPredicted RBP11.17□□□□□ -0.62
RPRD1B-203ENST00000462548 SAP30O75446 220 aa11.16□□□□□ -0.62
RPRD1B-203ENST00000462548 DEFB131AP59861 70 aa11.16□□□□□ -0.62
RPRD1B-203ENST00000462548 LINC00482Q8N8I6 264 aa11.16□□□□□ -0.62
RPRD1B-203ENST00000462548 LENEPQ9Y5L5 61 aa11.16□□□□□ -0.62
RPRD1B-203ENST00000462548 FABP5P3A8MUU1 101 aa11.16□□□□□ -0.62
RPRD1B-203ENST00000462548 MRPL54Q6P161 138 aaKnown RBP11.16□□□□□ -0.62
RPRD1B-203ENST00000462548 NAT8BQ9UHF3 227 aa11.16□□□□□ -0.62
RPRD1B-203ENST00000462548 KIR2DL5BA0A0G2JN68 375 aa11.15□□□□□ -0.62
RPRD1B-203ENST00000462548 KIR2DL5BA0A0G2JPC4 375 aa11.15□□□□□ -0.62
RPRD1B-203ENST00000462548 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.62
RPRD1B-203ENST00000462548 KIR2DL5AQ8N109 375 aa11.15□□□□□ -0.62
RPRD1B-203ENST00000462548 TRAV25A0A0B4J276 109 aa11.15□□□□□ -0.63
RPRD1B-203ENST00000462548 TMEM189A5PLL7 270 aa11.15□□□□□ -0.63
RPRD1B-203ENST00000462548 KNCNA6PVL3 124 aa11.15□□□□□ -0.63
RPRD1B-203ENST00000462548 IGKV3-20P01619 116 aa11.15□□□□□ -0.63
RPRD1B-203ENST00000462548 PF4P02776 101 aa11.15□□□□□ -0.63
RPRD1B-203ENST00000462548 ZNF705AQ6ZN79 300 aaPredicted RBP11.15□□□□□ -0.63
RPRD1B-203ENST00000462548 PGLYRP4Q96LB8 373 aa11.15□□□□□ -0.63
RPRD1B-203ENST00000462548 SPAG8Q99932 426 aaPredicted RBP11.15□□□□□ -0.63
RPRD1B-203ENST00000462548 MAP6D1Q9H9H5 199 aa11.15□□□□□ -0.63
RPRD1B-203ENST00000462548 CRISP2P16562 243 aa11.14□□□□□ -0.63
RPRD1B-203ENST00000462548 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
RPRD1B-203ENST00000462548 IGKV3D-20A0A0C4DH25 116 aa11.14□□□□□ -0.63
RPRD1B-203ENST00000462548 IGLV1-51P01701 117 aa11.14□□□□□ -0.63
RPRD1B-203ENST00000462548 FOXI2Q6ZQN5 318 aa11.14□□□□□ -0.63
RPRD1B-203ENST00000462548 APRG1Q8IVJ8 170 aa11.14□□□□□ -0.63
RPRD1B-203ENST00000462548 VWFP04275 2813 aa11.13□□□□□ -0.63
RPRD1B-203ENST00000462548 ORM1P02763 201 aa11.13□□□□□ -0.63
RPRD1B-203ENST00000462548 EBLN2Q6P2I7 272 aa11.13□□□□□ -0.63
RPRD1B-203ENST00000462548 OR4C46A6NHA9 309 aa11.13□□□□□ -0.63
RPRD1B-203ENST00000462548 FOXA3P55318 350 aaPredicted RBP11.13□□□□□ -0.63
RPRD1B-203ENST00000462548 ODF3L2Q3SX64 289 aa11.13□□□□□ -0.63
RPRD1B-203ENST00000462548 LINC01559Q495D7 138 aa11.13□□□□□ -0.63
RPRD1B-203ENST00000462548 ACTL10Q5JWF8 245 aa11.13□□□□□ -0.63
RPRD1B-203ENST00000462548 TRBV7-9A0A0J9YWB2 115 aa11.12□□□□□ -0.63
RPRD1B-203ENST00000462548 GRIFINA4D1Z8 144 aa11.12□□□□□ -0.63
RPRD1B-203ENST00000462548 FAM231BA6NCW3 169 aa11.12□□□□□ -0.63
RPRD1B-203ENST00000462548 GPX1P07203 203 aa11.12□□□□□ -0.63
RPRD1B-203ENST00000462548 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
RPRD1B-203ENST00000462548 BATFQ16520 125 aa11.12□□□□□ -0.63
RPRD1B-203ENST00000462548 IQCJQ1A5X6 159 aa11.12□□□□□ -0.63
RPRD1B-203ENST00000462548 KLLNB2CW77 178 aa11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 PRR31Q5SQ13 230 aa11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 FBN1P35555 2871 aaKnown RBP11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 A0A1B0GXF2 115 aa11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 TMEM136Q6ZRR5 245 aa11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 MRPL52Q86TS9 123 aaKnown RBP11.11□□□□□ -0.63
RPRD1B-203ENST00000462548 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 M0R2Z0 102 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 RNF151Q2KHN1 245 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 TRAPPC1Q9Y5R8 145 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 H3BMM0 161 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 DUSP14O95147 198 aaKnown RBP11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 ARMS2P0C7Q2 107 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 HLA-DRB4P13762 266 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 Q6AWC8 147 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 ODF3Q96PU9 254 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 TPPP3Q9BW30 176 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 HLA-DRB4X5D2U9 266 aa11.1□□□□□ -0.63
RPRD1B-203ENST00000462548 TRAV12-2A0A075B6T6 113 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 IGLC6P0CF74 106 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 LYZL1Q6UWQ5 148 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 MUC21A0A0G2JKD1 596 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 MUC21A0A140T8X8 626 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 A8MTW9 85 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 CCL25O15444 150 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 CAMPP49913 170 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 MUC21Q5SSG8 566 aa11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 MRPL18Q9H0U6 180 aaKnown RBP11.09□□□□□ -0.63
RPRD1B-203ENST00000462548 TRAV21A0A0B4J279 112 aa11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 CIDEAO60543 219 aa11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 PTTG1IPP53801 180 aa11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 FXYD7P58549 80 aa11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 RPS20P60866 119 aaKnown RBP11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 COA6Q5JTJ3 125 aaKnown RBP11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 GNB1LQ9BYB4 327 aa11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 NAGKQ9UJ70 344 aa11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 SCGB1D1O95968 90 aa11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 LEPP41159 167 aa11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 ATP5L2Q7Z4Y8 100 aa11.08□□□□□ -0.64
RPRD1B-203ENST00000462548 TRAV12-3A0A0B4J271 114 aa11.07□□□□□ -0.64
RPRD1B-203ENST00000462548 C20orf202A1L168 122 aa11.07□□□□□ -0.64
RPRD1B-203ENST00000462548 K7EP13 123 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms