RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 ARL17AQ8IVW1 177 aa1.2□□□□□ -2.22
VBP1-202ENST00000460509 ATOH7Q8N100 152 aa1.2□□□□□ -2.22
VBP1-202ENST00000460509 ATP6V0E2Q8NHE4 81 aa1.2□□□□□ -2.22
VBP1-202ENST00000460509 ZNF431Q8TF32 576 aaPredicted RBP1.2□□□□□ -2.22
VBP1-202ENST00000460509 SMIM7Q9BQ49 75 aa1.2□□□□□ -2.22
VBP1-202ENST00000460509 KLK9Q9UKQ9 250 aa1.2□□□□□ -2.22
VBP1-202ENST00000460509 QRICH2Q9H0J4 1663 aa1.2□□□□□ -2.22
VBP1-202ENST00000460509 LOC110117498A0A087WWA1 95 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 FAM92AA1XBS5 289 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 MIF4GDA9UHW6 222 aaKnown RBP1.19□□□□□ -2.22
VBP1-202ENST00000460509 F8W1H4 67 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 CDC42EP2O14613 210 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 INE1O15225 51 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 NUPR1O60356 82 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 APOC1P02654 83 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 FAM74A1Q5RGS3 127 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 ATP11AUNQ6ZP68 121 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 CDC42SE1Q9NRR8 79 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 CCDC167Q9P0B6 97 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 C22orf24Q9Y442 160 aa1.19□□□□□ -2.22
VBP1-202ENST00000460509 PTPRMP28827 1452 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 BCORL1Q5H9F3 1711 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 A0A0G2JMM0 328 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 LOC100130705A0A1B0GUX0 176 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 A0A1W2PPB8 328 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 KIR3DP1A8MWS1 328 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 PYYP10082 97 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 GUCA1AP43080 201 aaPredicted RBP1.18□□□□□ -2.22
VBP1-202ENST00000460509 MPV17LQ2QL34 196 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 SPRNQ5BIV9 151 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 MIC13Q5XKP0 118 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 SCIMPQ6UWF3 145 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 SNX29P2Q8IUI4 249 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 TCTEX1D1Q8N7M0 179 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 C5orf17Q8NAS9 161 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 TMEM203Q969S6 136 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 DPH3Q96FX2 82 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 SAR1AQ9NR31 198 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 ZFP30Q9Y2G7 519 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 NOP16Q9Y3C1 178 aaKnown RBP1.18□□□□□ -2.22
VBP1-202ENST00000460509 DLG5Q8TDM6 1919 aa1.18□□□□□ -2.22
VBP1-202ENST00000460509 PHRF1Q9P1Y6 1649 aaKnown RBP1.18□□□□□ -2.22
VBP1-202ENST00000460509 SPEF2Q9C093 1822 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 MYH1P12882 1939 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 CUL7Q14999 1698 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 CTTNBP2Q8WZ74 1663 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 POLEQ07864 2286 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 FANCMQ8IYD8 2048 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 A0A0J9YY99 117 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 H3BRM9 83 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 J3QLW9 94 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 CCL25O15444 150 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 IFNGP01579 166 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 FGF7P21781 194 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 BTG2P78543 158 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 LINC00299Q6ZSB3 139 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 SLC25A26Q70HW3 274 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 LIMD2Q9BT23 127 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 SNRNP25Q9BV90 132 aaKnown RBP1.17□□□□□ -2.22
VBP1-202ENST00000460509 SIP14410 1827 aa1.17□□□□□ -2.22
VBP1-202ENST00000460509 TNRC6BQ9UPQ9 1833 aaKnown RBP1.17□□□□□ -2.22
VBP1-202ENST00000460509 TRAV12-2A0A075B6T6 113 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 TRAV2A0A0B4J234 112 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 SPAARA0A1B0GVQ0 90 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 BBIP1A8MTZ0 92 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 FAM25AB3EWG3 89 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 FAM25CB3EWG5 89 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 FAM25GB3EWG6 89 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 IGLV3-1P01715 115 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 OCIAD2Q56VL3 154 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 LINC01545Q5VT33 79 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 IDO2Q6ZQW0 420 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.16□□□□□ -2.22
VBP1-202ENST00000460509 VSTM2AQ8TAG5 236 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 TAS2R8Q9NYW2 309 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 CEP192Q8TEP8 1941 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 A2ML1A8K2U0 1454 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 CFTRP13569 1480 aa1.16□□□□□ -2.22
VBP1-202ENST00000460509 RP1P56715 2156 aa1.15□□□□□ -2.22
VBP1-202ENST00000460509 NAIPQ13075 1403 aa1.15□□□□□ -2.22
VBP1-202ENST00000460509 MED12LQ86YW9 2145 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 A0A1W2PRS3 328 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 JMJD7-PLA2G4BH0Y9G9 81 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 PPYP01298 95 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 S100A1P23297 94 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 WHAMMP3Q1A5X7 153 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 CSAG1Q6PB30 78 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 LINC00322Q6ZN03 302 aaPredicted RBP1.15□□□□□ -2.23
VBP1-202ENST00000460509 C3orf62Q6ZUJ4 267 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 DYNLRB2Q8TF09 96 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 MYOM2P54296 1465 aa1.15□□□□□ -2.23
VBP1-202ENST00000460509 ANK1P16157 1881 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 CASZ1Q86V15 1759 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 TRBV6-7A0A0A0MS04 114 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 CCDC179H3BU77 68 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 ZNF25P17030 456 aaPredicted RBP1.14□□□□□ -2.23
VBP1-202ENST00000460509 PDE6GP18545 87 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 MEIG1Q5JSS6 88 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 KCNRGQ8N5I3 272 aa1.14□□□□□ -2.23
VBP1-202ENST00000460509 PP6455Q8WZ26 134 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms