RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
HSPG2-207ENST00000453796 FGF8P55075 233 aaPredicted RBP10.07□□□□□ -0.8
HSPG2-207ENST00000453796 IQCF2Q8IXL9 164 aa10.07□□□□□ -0.8
HSPG2-207ENST00000453796 NDFIP1Q9BT67 221 aa10.07□□□□□ -0.8
HSPG2-207ENST00000453796 UPK3BQ9BT76 320 aa10.07□□□□□ -0.8
HSPG2-207ENST00000453796 NAGKQ9UJ70 344 aa10.07□□□□□ -0.8
HSPG2-207ENST00000453796 FBLL1A6NHQ2 334 aaKnown RBP10.06□□□□□ -0.8
HSPG2-207ENST00000453796 PRSS29PA6NIE9 313 aa10.06□□□□□ -0.8
HSPG2-207ENST00000453796 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
HSPG2-207ENST00000453796 CRYBA4P53673 196 aa10.06□□□□□ -0.8
HSPG2-207ENST00000453796 KCNS1Q96KK3 526 aa10.06□□□□□ -0.8
HSPG2-207ENST00000453796 LINC00479Q96M42 142 aa10.06□□□□□ -0.8
HSPG2-207ENST00000453796 PRO0255Q9UI72 69 aa10.06□□□□□ -0.8
HSPG2-207ENST00000453796 MRPS16Q9Y3D3 137 aaKnown RBP10.06□□□□□ -0.8
HSPG2-207ENST00000453796 A0A0D9SG52 128 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 MAP1LC3B2A6NCE7 125 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 PAX4O43316 350 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 GCGP01275 180 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 SFTA3P0C7M3 94 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 SEC11BP0C7V7 166 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 FHITP49789 147 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 UBE2G2P60604 165 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 SLAQ13239 276 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 C1orf134Q5TEV5 83 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 PRNTQ86SH4 94 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 ZNF479Q96JC4 524 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 MAP1LC3BQ9GZQ8 125 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 Q9H8V8 135 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 SDF2L1Q9HCN8 221 aa10.05□□□□□ -0.8
HSPG2-207ENST00000453796 TRAV34A0A0B4J273 112 aa10.04□□□□□ -0.8
HSPG2-207ENST00000453796 M0R2P5 195 aa10.04□□□□□ -0.8
HSPG2-207ENST00000453796 PEX7O00628 323 aa10.04□□□□□ -0.8
HSPG2-207ENST00000453796 PFN1P07737 140 aaKnown RBP10.04□□□□□ -0.8
HSPG2-207ENST00000453796 SMUG1Q53HV7 270 aa10.04□□□□□ -0.8
HSPG2-207ENST00000453796 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
HSPG2-207ENST00000453796 HHLA3Q9XRX5 114 aa10.04□□□□□ -0.8
HSPG2-207ENST00000453796 ICOSQ9Y6W8 199 aa10.04□□□□□ -0.8
HSPG2-207ENST00000453796 ARL2-SNX15V9GYD0 113 aa10.04□□□□□ -0.8
HSPG2-207ENST00000453796 TRAV4A0A0B4J268 109 aa10.03□□□□□ -0.8
HSPG2-207ENST00000453796 BCL2L11O43521 198 aa10.03□□□□□ -0.8
HSPG2-207ENST00000453796 SAPCD1Q5SSQ6 148 aa10.03□□□□□ -0.8
HSPG2-207ENST00000453796 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
HSPG2-207ENST00000453796 KRTAP1-5Q9BYS1 174 aa10.03□□□□□ -0.8
HSPG2-207ENST00000453796 IFNA7P01567 189 aa10.02□□□□□ -0.81
HSPG2-207ENST00000453796 ZFP69Q49AA0 526 aa10.02□□□□□ -0.81
HSPG2-207ENST00000453796 SOHLH1Q5JUK2 328 aa10.02□□□□□ -0.81
HSPG2-207ENST00000453796 Q86TA4 180 aa10.02□□□□□ -0.81
HSPG2-207ENST00000453796 MBD3L1Q8WWY6 194 aa10.02□□□□□ -0.81
HSPG2-207ENST00000453796 C9orf85Q96MD7 179 aa10.02□□□□□ -0.81
HSPG2-207ENST00000453796 ZNF471Q9BX82 626 aaPredicted RBP10.02□□□□□ -0.81
HSPG2-207ENST00000453796 DYNC1H1Q14204 4646 aaKnown RBP10.02□□□□□ -0.81
HSPG2-207ENST00000453796 TRGV4A0A0C4DH28 118 aa10.01□□□□□ -0.81
HSPG2-207ENST00000453796 KANTRA0A1W2PQU2 76 aa10.01□□□□□ -0.81
HSPG2-207ENST00000453796 UMAD1C9J7I0 102 aa10.01□□□□□ -0.81
HSPG2-207ENST00000453796 RNASE3P12724 160 aaKnown RBP10.01□□□□□ -0.81
HSPG2-207ENST00000453796 COX8CQ7Z4L0 72 aa10.01□□□□□ -0.81
HSPG2-207ENST00000453796 C6orf223Q8N319 242 aa10.01□□□□□ -0.81
HSPG2-207ENST00000453796 IGKV3D-20A0A0C4DH25 116 aa10□□□□□ -0.81
HSPG2-207ENST00000453796 PPT1P50897 306 aa10□□□□□ -0.81
HSPG2-207ENST00000453796 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
HSPG2-207ENST00000453796 DPPA3Q6W0C5 159 aa10□□□□□ -0.81
HSPG2-207ENST00000453796 TMUB2Q71RG4 321 aa10□□□□□ -0.81
HSPG2-207ENST00000453796 OR4C5Q8NGB2 326 aa10□□□□□ -0.81
HSPG2-207ENST00000453796 STOML3Q8TAV4 291 aa10□□□□□ -0.81
HSPG2-207ENST00000453796 DNAH11Q96DT5 4516 aa10□□□□□ -0.81
HSPG2-207ENST00000453796 TRBV6-1A0A0K0K1D8 114 aa9.99□□□□□ -0.81
HSPG2-207ENST00000453796 A0A1W2PPQ1 181 aa9.99□□□□□ -0.81
HSPG2-207ENST00000453796 FABP5P3A8MUU1 101 aa9.99□□□□□ -0.81
HSPG2-207ENST00000453796 K7EQD1 137 aa9.99□□□□□ -0.81
HSPG2-207ENST00000453796 CRIP1P50238 77 aa9.99□□□□□ -0.81
HSPG2-207ENST00000453796 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
HSPG2-207ENST00000453796 FAM213BQ8TBF2 198 aa9.99□□□□□ -0.81
HSPG2-207ENST00000453796 PTH2Q96A98 100 aa9.99□□□□□ -0.81
HSPG2-207ENST00000453796 TCEAL7Q9BRU2 100 aa9.99□□□□□ -0.81
HSPG2-207ENST00000453796 PGPEP1LA6NFU8 196 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 RS1O15537 224 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 PAGE4O60829 102 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 GATA1P15976 413 aaPredicted RBP9.98□□□□□ -0.81
HSPG2-207ENST00000453796 TNP2Q05952 138 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 ZNF876PQ49A33 203 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 LYPD5Q6UWN5 251 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 TCTE3Q8IZS6 198 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 SFT2D1Q8WV19 159 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 ZC2HC1AQ96GY0 325 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 FMC1Q96HJ9 113 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 ZFP30Q9Y2G7 519 aa9.98□□□□□ -0.81
HSPG2-207ENST00000453796 C9JCJ5 164 aa9.97□□□□□ -0.81
HSPG2-207ENST00000453796 ORM1P02763 201 aa9.97□□□□□ -0.81
HSPG2-207ENST00000453796 TPT1P13693 172 aaKnown RBP9.97□□□□□ -0.81
HSPG2-207ENST00000453796 GYPEP15421 78 aa9.97□□□□□ -0.81
HSPG2-207ENST00000453796 EIF5AP63241 154 aaKnown RBP9.97□□□□□ -0.81
HSPG2-207ENST00000453796 LGALSLQ3ZCW2 172 aaPredicted RBP9.97□□□□□ -0.81
HSPG2-207ENST00000453796 ZNF506Q5JVG8 444 aa9.97□□□□□ -0.81
HSPG2-207ENST00000453796 CFAP126Q5VTH2 177 aa9.97□□□□□ -0.81
HSPG2-207ENST00000453796 CST9LP1Q5W188 147 aa9.97□□□□□ -0.81
HSPG2-207ENST00000453796 Q6ZNX1 250 aa9.97□□□□□ -0.81
HSPG2-207ENST00000453796 ZNF575Q86XF7 245 aa9.97□□□□□ -0.81
HSPG2-207ENST00000453796 LOC100131303A0A0U1RQF7 123 aa9.96□□□□□ -0.82
HSPG2-207ENST00000453796 SIVA1O15304 175 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms