RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 IGLV1-44P01699 117 aa14.33□□□□□ -0.12
PTPA-223ENST00000452489 TIMD4Q96H15 378 aa14.33□□□□□ -0.12
PTPA-223ENST00000452489 BEX4Q9NWD9 120 aaPredicted RBP14.33□□□□□ -0.12
PTPA-223ENST00000452489 IGKV3D-20A0A0C4DH25 116 aa14.32□□□□□ -0.12
PTPA-223ENST00000452489 C11orf21Q9P2W6 132 aa14.32□□□□□ -0.12
PTPA-223ENST00000452489 KLK5Q9Y337 293 aaPredicted RBP14.32□□□□□ -0.12
PTPA-223ENST00000452489 C11orf86A6NJI1 115 aa14.32□□□□□ -0.12
PTPA-223ENST00000452489 C14orf178Q8N769 122 aaPredicted RBP14.32□□□□□ -0.12
PTPA-223ENST00000452489 SLC25A29Q8N8R3 303 aa14.32□□□□□ -0.12
PTPA-223ENST00000452489 K7EIM0 57 aa14.31□□□□□ -0.12
PTPA-223ENST00000452489 SRSF2Q01130 221 aaKnown RBP14.31□□□□□ -0.12
PTPA-223ENST00000452489 TMEM200BQ69YZ2 307 aa14.31□□□□□ -0.12
PTPA-223ENST00000452489 SIGLEC9Q9Y336 463 aa14.31□□□□□ -0.12
PTPA-223ENST00000452489 FAM236AA0A1B0GUQ0 79 aa14.31□□□□□ -0.12
PTPA-223ENST00000452489 FAM236BA0A1B0GV22 79 aa14.31□□□□□ -0.12
PTPA-223ENST00000452489 ASPMQ8IZT6 3477 aa14.3□□□□□ -0.12
PTPA-223ENST00000452489 ATXN8Q156A1 80 aa14.3□□□□□ -0.12
PTPA-223ENST00000452489 CEMP1Q6PRD7 247 aaPredicted RBP14.3□□□□□ -0.12
PTPA-223ENST00000452489 C2orf66Q6UXQ4 117 aa14.3□□□□□ -0.12
PTPA-223ENST00000452489 FAM19A5Q7Z5A7 132 aaPredicted RBP14.3□□□□□ -0.12
PTPA-223ENST00000452489 ZNF672Q499Z4 452 aaPredicted RBP14.3□□□□□ -0.12
PTPA-223ENST00000452489 C9orf153Q5TBE3 101 aa14.3□□□□□ -0.12
PTPA-223ENST00000452489 TMEM263Q8WUH6 116 aaKnown RBP14.3□□□□□ -0.12
PTPA-223ENST00000452489 DUX3Q96PT4 197 aa14.3□□□□□ -0.12
PTPA-223ENST00000452489 NPFFO15130 113 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 Q1RN00 199 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 ORMDL2Q53FV1 153 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 DYNAPQ8N1N2 210 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 MED13Q9UHV7 2174 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 TRBV10-2A0A0K0K1G8 114 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 M0R2P5 195 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 NDUFA7O95182 113 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 CRYGBP07316 175 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 CRYGDP07320 174 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 P0DMU3 169 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 FAM231AP0DMU4 169 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 FAM231CP0DMU5 169 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 PRB3Q04118 309 aaPredicted RBP14.29□□□□□ -0.12
PTPA-223ENST00000452489 HES1Q14469 280 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 PMS2CLQ68D20 193 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 DKK4Q9UBT3 224 aa14.29□□□□□ -0.12
PTPA-223ENST00000452489 TRGV11A0A075B6L2 103 aa14.28□□□□□ -0.12
PTPA-223ENST00000452489 PRAC2D3DTV9 90 aa14.28□□□□□ -0.12
PTPA-223ENST00000452489 DLX1P56177 255 aa14.28□□□□□ -0.12
PTPA-223ENST00000452489 HERVK_113P63121 156 aa14.28□□□□□ -0.12
PTPA-223ENST00000452489 TNFAIP6P98066 277 aaPredicted RBP14.28□□□□□ -0.12
PTPA-223ENST00000452489 IGLV4-69A0A075B6H9 119 aa14.27□□□□□ -0.13
PTPA-223ENST00000452489 IGHV7-4-1A0A0J9YVY3 117 aa14.27□□□□□ -0.13
PTPA-223ENST00000452489 ZNF474Q6S9Z5 364 aaPredicted RBP14.27□□□□□ -0.13
PTPA-223ENST00000452489 TRBV7-7A0A0K0K1E9 115 aa14.26□□□□□ -0.13
PTPA-223ENST00000452489 C2orf82Q6UX34 121 aa14.26□□□□□ -0.13
PTPA-223ENST00000452489 RPL39LQ96EH5 51 aaKnown RBP14.26□□□□□ -0.13
PTPA-223ENST00000452489 CSMD1Q96PZ7 3565 aa14.26□□□□□ -0.13
PTPA-223ENST00000452489 NTN3O00634 580 aaPredicted RBP14.26□□□□□ -0.13
PTPA-223ENST00000452489 HERVK_113P61574 105 aa14.26□□□□□ -0.13
PTPA-223ENST00000452489 GATA4P43694 442 aa14.25□□□□□ -0.13
PTPA-223ENST00000452489 SPANXN1Q5VSR9 72 aa14.25□□□□□ -0.13
PTPA-223ENST00000452489 DEFB104AQ8WTQ1 72 aa14.25□□□□□ -0.13
PTPA-223ENST00000452489 SPRY2O43597 315 aa14.25□□□□□ -0.13
PTPA-223ENST00000452489 ZNF22P17026 224 aaPredicted RBP14.25□□□□□ -0.13
PTPA-223ENST00000452489 SUMO2P61956 95 aaKnown RBP14.25□□□□□ -0.13
PTPA-223ENST00000452489 IGF2-ASQ6U949 168 aa14.25□□□□□ -0.13
PTPA-223ENST00000452489 AMELXQ99217 191 aa14.25□□□□□ -0.13
PTPA-223ENST00000452489 UBTD1Q9HAC8 227 aa14.25□□□□□ -0.13
PTPA-223ENST00000452489 SMAD5-AS1Q9Y6J3 95 aa14.25□□□□□ -0.13
PTPA-223ENST00000452489 RBAKDNA6NC62 111 aa14.24□□□□□ -0.13
PTPA-223ENST00000452489 IGHV1-46P01743 117 aa14.24□□□□□ -0.13
PTPA-223ENST00000452489 CD3EP07766 207 aa14.24□□□□□ -0.13
PTPA-223ENST00000452489 LY6DQ14210 128 aa14.24□□□□□ -0.13
PTPA-223ENST00000452489 PMVKQ15126 192 aa14.24□□□□□ -0.13
PTPA-223ENST00000452489 POM121L12Q8N7R1 296 aa14.24□□□□□ -0.13
PTPA-223ENST00000452489 TRAV25A0A0B4J276 109 aa14.24□□□□□ -0.13
PTPA-223ENST00000452489 M0R1B8 84 aa14.24□□□□□ -0.13
PTPA-223ENST00000452489 EBI3Q14213 229 aa14.24□□□□□ -0.13
PTPA-223ENST00000452489 C3orf22Q8N5N4 141 aa14.23□□□□□ -0.13
PTPA-223ENST00000452489 C1orf162Q8NEQ5 155 aaPredicted RBP14.23□□□□□ -0.13
PTPA-223ENST00000452489 EDA2RQ9HAV5 297 aa14.23□□□□□ -0.13
PTPA-223ENST00000452489 IGHV3OR16-8A0A075B7F1 116 aa14.23□□□□□ -0.13
PTPA-223ENST00000452489 TRIAP1O43715 76 aa14.23□□□□□ -0.13
PTPA-223ENST00000452489 GFRALQ6UXV0 394 aa14.23□□□□□ -0.13
PTPA-223ENST00000452489 LINC01600Q96MT4 127 aa14.23□□□□□ -0.13
PTPA-223ENST00000452489 DMXL2Q8TDJ6 3036 aa14.23□□□□□ -0.13
PTPA-223ENST00000452489 H7C423 109 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 J3KT08 172 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 TMEM170BQ5T4T1 132 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 RNF182Q8N6D2 247 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 C9orf106Q8NAJ2 232 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 MDS2Q8NDY4 140 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 TMEM101Q96IK0 257 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 TSHBP01222 138 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 CFIP05156 583 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 LINC00311Q8N616 119 aa14.22□□□□□ -0.13
PTPA-223ENST00000452489 MUSTN1Q8IVN3 82 aa14.21□□□□□ -0.13
PTPA-223ENST00000452489 A0A0B4J2C4 111 aa14.2□□□□□ -0.14
PTPA-223ENST00000452489 RNF223E7ERA6 249 aa14.2□□□□□ -0.14
PTPA-223ENST00000452489 LRRC75A-AS1Q8N1F1 130 aa14.2□□□□□ -0.14
PTPA-223ENST00000452489 CCL8P80075 99 aa14.2□□□□□ -0.14
PTPA-223ENST00000452489 TEX36Q5VZQ5 186 aa14.2□□□□□ -0.14
PTPA-223ENST00000452489 SLC25A15Q9Y619 301 aa14.2□□□□□ -0.14
PTPA-223ENST00000452489 MALRD1Q5VYJ5 2156 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms