RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 Q5BKY6 102 aa13.55□□□□□ -0.24
VCP-203ENST00000448530 NEGR1Q7Z3B1 354 aa13.55□□□□□ -0.24
VCP-203ENST00000448530 IQCF2Q8IXL9 164 aa13.55□□□□□ -0.24
VCP-203ENST00000448530 TVP23CQ96ET8 276 aa13.55□□□□□ -0.24
VCP-203ENST00000448530 SGK494Q96LW2 274 aa13.55□□□□□ -0.24
VCP-203ENST00000448530 M0R2P5 195 aa13.54□□□□□ -0.24
VCP-203ENST00000448530 TCRAP04437 139 aa13.54□□□□□ -0.24
VCP-203ENST00000448530 OR4C5Q8NGB2 326 aa13.54□□□□□ -0.24
VCP-203ENST00000448530 ZNF479Q96JC4 524 aa13.54□□□□□ -0.24
VCP-203ENST00000448530 TRAV4A0A0B4J268 109 aa13.53□□□□□ -0.24
VCP-203ENST00000448530 IGHV3-16A0A0C4DH30 117 aa13.53□□□□□ -0.24
VCP-203ENST00000448530 ORM1P02763 201 aa13.53□□□□□ -0.24
VCP-203ENST00000448530 SRIP30626 198 aa13.53□□□□□ -0.24
VCP-203ENST00000448530 SUMO1P63165 101 aaKnown RBP13.53□□□□□ -0.24
VCP-203ENST00000448530 ZFP69Q49AA0 526 aa13.53□□□□□ -0.24
VCP-203ENST00000448530 RPL7L1Q6DKI1 246 aaKnown RBP13.53□□□□□ -0.24
VCP-203ENST00000448530 LYPD5Q6UWN5 251 aa13.53□□□□□ -0.24
VCP-203ENST00000448530 OR2T35Q8NGX2 323 aa13.53□□□□□ -0.24
VCP-203ENST00000448530 SUN5Q8TC36 379 aa13.53□□□□□ -0.24
VCP-203ENST00000448530 TYMSP04818 313 aa13.52□□□□□ -0.25
VCP-203ENST00000448530 PSG8Q9UQ74 426 aa13.52□□□□□ -0.25
VCP-203ENST00000448530 C9JCJ5 164 aa13.51□□□□□ -0.25
VCP-203ENST00000448530 GYPEP15421 78 aa13.51□□□□□ -0.25
VCP-203ENST00000448530 RGS21Q2M5E4 152 aa13.51□□□□□ -0.25
VCP-203ENST00000448530 CYB561D1Q8N8Q1 229 aa13.51□□□□□ -0.25
VCP-203ENST00000448530 KRTAP17-1Q9BYP8 105 aa13.51□□□□□ -0.25
VCP-203ENST00000448530 EPDR1Q9UM22 224 aa13.51□□□□□ -0.25
VCP-203ENST00000448530 DNAH11Q96DT5 4516 aa13.51□□□□□ -0.25
VCP-203ENST00000448530 RNF222A6NCQ9 220 aa13.5□□□□□ -0.25
VCP-203ENST00000448530 FBLL1A6NHQ2 334 aaKnown RBP13.5□□□□□ -0.25
VCP-203ENST00000448530 GGTLC3B5MD39 225 aa13.5□□□□□ -0.25
VCP-203ENST00000448530 K7EQD1 137 aa13.5□□□□□ -0.25
VCP-203ENST00000448530 TAAR5O14804 337 aa13.5□□□□□ -0.25
VCP-203ENST00000448530 GCGP01275 180 aa13.5□□□□□ -0.25
VCP-203ENST00000448530 LINC00315P59091 139 aa13.5□□□□□ -0.25
VCP-203ENST00000448530 FLI1Q01543 452 aaPredicted RBP13.5□□□□□ -0.25
VCP-203ENST00000448530 SMUG1Q53HV7 270 aa13.5□□□□□ -0.25
VCP-203ENST00000448530 PRNTQ86SH4 94 aa13.5□□□□□ -0.25
VCP-203ENST00000448530 TXNDC17Q9BRA2 123 aa13.5□□□□□ -0.25
VCP-203ENST00000448530 TRAV9-2A0A087WT02 112 aa13.49□□□□□ -0.25
VCP-203ENST00000448530 SPATA12Q7Z6I5 190 aa13.49□□□□□ -0.25
VCP-203ENST00000448530 DYNC1H1Q14204 4646 aaKnown RBP13.48□□□□□ -0.25
VCP-203ENST00000448530 CTXND1A0A1B0GTU2 59 aa13.48□□□□□ -0.25
VCP-203ENST00000448530 A0A1W2PRE2 83 aa13.48□□□□□ -0.25
VCP-203ENST00000448530 IFNA7P01567 189 aa13.48□□□□□ -0.25
VCP-203ENST00000448530 PFN1P07737 140 aaKnown RBP13.48□□□□□ -0.25
VCP-203ENST00000448530 SAPCD1Q5SSQ6 148 aa13.48□□□□□ -0.25
VCP-203ENST00000448530 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
VCP-203ENST00000448530 TMEM75Q8N9X5 138 aa13.48□□□□□ -0.25
VCP-203ENST00000448530 PPT1P50897 306 aa13.47□□□□□ -0.25
VCP-203ENST00000448530 ZNF80P51504 273 aaPredicted RBP13.47□□□□□ -0.25
VCP-203ENST00000448530 ZNF876PQ49A33 203 aa13.47□□□□□ -0.25
VCP-203ENST00000448530 SH2D6Q7Z4S9 175 aa13.47□□□□□ -0.25
VCP-203ENST00000448530 LY96Q9Y6Y9 160 aa13.47□□□□□ -0.25
VCP-203ENST00000448530 IGLV2-11P01706 119 aa13.46□□□□□ -0.25
VCP-203ENST00000448530 NHLRC2Q8NBF2 726 aa13.46□□□□□ -0.25
VCP-203ENST00000448530 ARPC5O15511 151 aa13.45□□□□□ -0.26
VCP-203ENST00000448530 UBE2G2P60604 165 aa13.45□□□□□ -0.26
VCP-203ENST00000448530 NFE4Q86UQ8 179 aa13.45□□□□□ -0.26
VCP-203ENST00000448530 C11orf21Q9P2W6 132 aa13.45□□□□□ -0.26
VCP-203ENST00000448530 PCLOQ9Y6V0 5065 aa13.44□□□□□ -0.26
VCP-203ENST00000448530 EREGO14944 169 aa13.44□□□□□ -0.26
VCP-203ENST00000448530 CIDEAO60543 219 aa13.44□□□□□ -0.26
VCP-203ENST00000448530 EVI2AP22794 236 aa13.44□□□□□ -0.26
VCP-203ENST00000448530 ZNF726P1Q15940 193 aa13.44□□□□□ -0.26
VCP-203ENST00000448530 NKX6-2Q9C056 277 aaPredicted RBP13.44□□□□□ -0.26
VCP-203ENST00000448530 TRAV34A0A0B4J273 112 aa13.43□□□□□ -0.26
VCP-203ENST00000448530 K7EP13 123 aa13.43□□□□□ -0.26
VCP-203ENST00000448530 CDK2AP2O75956 126 aa13.43□□□□□ -0.26
VCP-203ENST00000448530 GATA1P15976 413 aaPredicted RBP13.43□□□□□ -0.26
VCP-203ENST00000448530 PRADC1Q9BSG0 188 aa13.43□□□□□ -0.26
VCP-203ENST00000448530 LOC100131303A0A0U1RQF7 123 aa13.42□□□□□ -0.26
VCP-203ENST00000448530 PEX7O00628 323 aa13.42□□□□□ -0.26
VCP-203ENST00000448530 S100A4P26447 101 aaKnown RBP13.42□□□□□ -0.26
VCP-203ENST00000448530 FGF8P55075 233 aaPredicted RBP13.42□□□□□ -0.26
VCP-203ENST00000448530 WFDC10BQ8IUB3 73 aa13.42□□□□□ -0.26
VCP-203ENST00000448530 LINC00479Q96M42 142 aa13.42□□□□□ -0.26
VCP-203ENST00000448530 RS1O15537 224 aa13.41□□□□□ -0.26
VCP-203ENST00000448530 ERVFC1-1P60608 527 aa13.41□□□□□ -0.26
VCP-203ENST00000448530 CFAP126Q5VTH2 177 aa13.41□□□□□ -0.26
VCP-203ENST00000448530 Q6ZRN7 208 aaPredicted RBP13.41□□□□□ -0.26
VCP-203ENST00000448530 STOML3Q8TAV4 291 aa13.41□□□□□ -0.26
VCP-203ENST00000448530 HIST1H2BAQ96A08 127 aa13.41□□□□□ -0.26
VCP-203ENST00000448530 C9orf85Q96MD7 179 aa13.41□□□□□ -0.26
VCP-203ENST00000448530 ARL2-SNX15V9GYD0 113 aa13.41□□□□□ -0.26
VCP-203ENST00000448530 MAP1LC3B2A6NCE7 125 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 FAM74A7A6NL05 159 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 FABP5P3A8MUU1 101 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 G3V3Q6 166 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 KRTAP10-2P60368 255 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 RHOHQ15669 191 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 SLC25A29Q8N8R3 303 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 PTH2Q96A98 100 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 MAP1LC3BQ9GZQ8 125 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 MSRB1Q9NZV6 116 aa13.4□□□□□ -0.26
VCP-203ENST00000448530 IGHV3-73A0A0B4J1V6 119 aa13.39□□□□□ -0.27
VCP-203ENST00000448530 TRBV6-4A0A1B0GX49 114 aa13.39□□□□□ -0.27
VCP-203ENST00000448530 PGPEP1LA6NFU8 196 aa13.39□□□□□ -0.27
VCP-203ENST00000448530 DNAH10OSP0CZ25 163 aa13.39□□□□□ -0.27
VCP-203ENST00000448530 ZNF506Q5JVG8 444 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms