RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 IGHV3-66A0A0C4DH42 116 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 FAM240AA0A1B0GVK7 77 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 IZUMO1RA6ND01 250 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 PGPA6NDG6 321 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 ZNF705FA8MVS1 300 aaPredicted RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 ISLRO14498 428 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 HYPMO75409 117 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 CNIH1O95406 144 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 FSTL3O95633 263 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 IGLV2-8P01709 118 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 SLC25A5P05141 298 aaKnown RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 ZNF705DP0CH99 300 aaPredicted RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 ZNF705BP0CI00 300 aaPredicted RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 TPPP2P59282 170 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 RAB4BP61018 213 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 UBE2G1P62253 170 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 ARF6P62330 175 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 RANP62826 216 aaKnown RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 RBMY1FQ15415 496 aaKnown RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 IQCJQ1A5X6 159 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 FBXL19-AS1Q494R0 122 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 COX19Q49B96 90 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 IBA57Q5T440 356 aaKnown RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 MRPL54Q6P161 138 aaKnown RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 BAGE3Q86Y29 109 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 BAGE2Q86Y30 109 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 ZNF664Q8N3J9 261 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 ST6GALNAC3Q8NDV1 305 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 SRSF12Q8WXF0 261 aaKnown RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 CBLN4Q9NTU7 201 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 NAT8BQ9UHF3 227 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 TSSC4Q9Y5U2 329 aaPredicted RBP2.75□□□□□ -1.97
VPS29-202ENST00000447578 GPR179Q6PRD1 2367 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 GTF3C1Q12789 2109 aa2.75□□□□□ -1.97
VPS29-202ENST00000447578 TRAV8-4A0A0B4J246 113 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 SMIM27A0A1W2PRY6 76 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 F2Z2F3 143 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 LY6LH3BQJ8 138 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 I3L2K1 104 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 P01737 135 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 APCSP02743 223 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 RBP4P02753 201 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 MT-ND6P03923 174 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 NBEAP1P0C6P0 100 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 IGLC1P0CG04 106 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 CD24P25063 80 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 DDTP30046 118 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 Q0VG73 95 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 KLRD1Q13241 179 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 HES1Q14469 280 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 MMDQ15546 238 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 LDLRAD2Q5SZI1 272 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 CYB5R2Q6BCY4 276 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 TMEM136Q6ZRR5 245 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 LY6G5BQ8NDX9 201 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 C14orf144Q96I85 54 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 RNF5Q99942 180 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 HSPB9Q9BQS6 159 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 FAM103A1Q9BTL3 118 aaKnown RBP2.74□□□□□ -1.97
VPS29-202ENST00000447578 TMEM243Q9BU79 118 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 GNB1LQ9BYB4 327 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 SAMD10Q9BYL1 202 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 ZNF331Q9NQX6 463 aaPredicted RBP2.74□□□□□ -1.97
VPS29-202ENST00000447578 NAGKQ9UJ70 344 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 EPDR1Q9UM22 224 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 HIGD1AQ9Y241 93 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 HILPDAQ9Y5L2 63 aa2.74□□□□□ -1.97
VPS29-202ENST00000447578 EYSQ5T1H1 3165 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 DNAJC13O75165 2243 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 CHD3Q12873 2000 aaKnown RBP2.73□□□□□ -1.97
VPS29-202ENST00000447578 ZDBF2Q9HCK1 2354 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 IGLV1-50A0A075B6I6 118 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 K7EIM0 57 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 M0R1W7 72 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 ZNF861PO60384 105 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 HLA-DQA1P01909 254 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 TCRAP04437 139 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 HIST1H1EP10412 219 aaKnown RBP2.73□□□□□ -1.97
VPS29-202ENST00000447578 ESDP10768 282 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 SRIP30626 198 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 BRS3P32247 399 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 KRTDAPP60985 99 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 COTL1Q14019 142 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 Q56UQ5 140 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 OR10J3Q5JRS4 329 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 TOMM20LQ6UXN7 152 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 FAM231DQ6ZW35 169 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 TCF24Q7RTU0 167 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 PRNTQ86SH4 94 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 EXOC3-AS1Q8N2X6 119 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 SIGLECL1Q8N7X8 197 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 C5orf17Q8NAS9 161 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 NUP35Q8NFH5 326 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 OR11H6Q8NGC7 330 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 TSKUQ8WUA8 353 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 FMC1Q96HJ9 113 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 GPR82Q96P67 336 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 C20orf144Q9BQM9 153 aa2.73□□□□□ -1.97
VPS29-202ENST00000447578 SLC25A39Q9BZJ4 359 aaPredicted RBP2.73□□□□□ -1.97
VPS29-202ENST00000447578 RPP21Q9H633 154 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms