RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PGPA6NDG6 321 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 C9JCJ5 164 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 DIRC3C9JPN6 131 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 EVI2AP22794 236 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 CRYBA4P53673 196 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 ERVFC1-1P60608 527 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 GCSAMLQ5JQS6 135 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 Q6AWC8 147 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 OR10G4Q8NGN3 311 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 VSIG2Q96IQ7 327 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 SPATA12Q7Z6I5 190 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 C10orf126Q8N4M7 172 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 ASB13Q8WXK3 278 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 RASL10AQ92737 203 aa5.37□□□□□ -1.55
CD44-211ENST00000442151 TRAV4A0A0B4J268 109 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 H0YIZ8 118 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 M0R2P5 195 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 NXPH4O95158 308 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 PFN1P07737 140 aaKnown RBP5.36□□□□□ -1.55
CD44-211ENST00000442151 PRB4P10163 310 aaPredicted RBP5.36□□□□□ -1.55
CD44-211ENST00000442151 TDRG1Q3Y452 100 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 CDPF1Q6NVV7 123 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 LYPD5Q6UWN5 251 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 ZNF575Q86XF7 245 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 OR4C5Q8NGB2 326 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 OR10G9Q8NGN4 311 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 OR10G7Q8NGN6 311 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 PHYHIPLQ96FC7 376 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 SDF2L1Q9HCN8 221 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 LY96Q9Y6Y9 160 aa5.36□□□□□ -1.55
CD44-211ENST00000442151 MUC4Q99102 2169 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 TAAR5O14804 337 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 SERF2P84101 59 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 FHL2Q14192 279 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 TMEM183BQ1AE95 376 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 ZFP69Q49AA0 526 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 TMEM183AQ8IXX5 376 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 HYLS1Q96M11 299 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 C8orf49Q96NF6 230 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 PRADC1Q9BSG0 188 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 TREM1Q9NP99 234 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 TMEM167BQ9NRX6 74 aa5.35□□□□□ -1.55
CD44-211ENST00000442151 MRPL16Q9NX20 251 aaKnown RBP5.35□□□□□ -1.55
CD44-211ENST00000442151 IGHV3-53P01767 116 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 PPT1P50897 306 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 H2BFSP57053 126 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 TIRAPP58753 221 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 MUC21Q5SSG8 566 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 SAPCD1Q5SSQ6 148 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 SMIM3Q9BZL3 60 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 NAGKQ9UJ70 344 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 DNAH17Q9UFH2 4485 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 PKHD1P08F94 4074 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 BORCS7-ASMTA0A0B4J1R7 106 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 TRAV8-6A0A0B4J262 113 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 CDC34P49427 236 aaPredicted RBP5.34□□□□□ -1.55
CD44-211ENST00000442151 MAPKAPK5-AS1Q8N8E1 139 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 C5orf17Q8NAS9 161 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.55
CD44-211ENST00000442151 PSMG3Q9BT73 122 aaPredicted RBP5.34□□□□□ -1.55
CD44-211ENST00000442151 NKX6-2Q9C056 277 aaPredicted RBP5.34□□□□□ -1.55
CD44-211ENST00000442151 ACTR3CQ9C0K3 210 aaPredicted RBP5.34□□□□□ -1.55
CD44-211ENST00000442151 RPH3ALQ9UNE2 315 aa5.34□□□□□ -1.55
CD44-211ENST00000442151 CXorf1O96002 111 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 GYPEP15421 78 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 LINC00315P59091 139 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 SMUG1Q53HV7 270 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 GOLT1AQ6ZVE7 132 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 OR2G3Q8NGZ4 309 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 Q8TAT8 98 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 PTH2Q96A98 100 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 MED28Q9H204 178 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 MDFICQ9P1T7 246 aa5.33□□□□□ -1.56
CD44-211ENST00000442151 K7EQD1 137 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 PRR9Q5T870 116 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 NHLRC2Q8NBF2 726 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 MSRB1Q9NZV6 116 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 TNFSF18Q9UNG2 199 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 IGHV3-16A0A0C4DH30 117 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 F6UZH7 168 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 SEC11BP0C7V7 166 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 STAG3L2P0CL84 134 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 STAG3L3P0CL85 134 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 DNAH10OSP0CZ25 163 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 PIK3CD-AS1Q5SR53 167 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 Q8N1X5 172 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 ZNF479Q96JC4 524 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 AQP10Q96PS8 301 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 TM2D2Q9BX73 214 aa5.32□□□□□ -1.56
CD44-211ENST00000442151 TRBV6-4A0A1B0GX49 114 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 A0A1W2PRE2 83 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 GNRH2O43555 120 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 PSCAO43653 123 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 PTTG1O95997 202 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 IFITM3Q01628 133 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 RHOHQ15669 191 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 ZNF876PQ49A33 203 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 RAB24Q969Q5 203 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 EPDR1Q9UM22 224 aa5.31□□□□□ -1.56
CD44-211ENST00000442151 PSG8Q9UQ74 426 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms