RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 CCL21O00585 134 aa15.64■□□□□ 0.09
SHOX2-203ENST00000441443 MT-ATP8P03928 68 aa15.64■□□□□ 0.09
SHOX2-203ENST00000441443 C21orf62Q9NYP8 219 aa15.64■□□□□ 0.09
SHOX2-203ENST00000441443 NBR2O15453 112 aa15.64■□□□□ 0.09
SHOX2-203ENST00000441443 PLNP26678 52 aa15.64■□□□□ 0.09
SHOX2-203ENST00000441443 FHL3Q13643 280 aa15.64■□□□□ 0.09
SHOX2-203ENST00000441443 Q6ZQT7 251 aa15.64■□□□□ 0.09
SHOX2-203ENST00000441443 SRSF8Q9BRL6 282 aaKnown RBP15.64■□□□□ 0.09
SHOX2-203ENST00000441443 HRNRQ86YZ3 2850 aaPredicted RBP15.63■□□□□ 0.09
SHOX2-203ENST00000441443 HES1Q14469 280 aa15.63■□□□□ 0.09
SHOX2-203ENST00000441443 ZNF418Q8TF45 676 aaPredicted RBP15.63■□□□□ 0.09
SHOX2-203ENST00000441443 C1QTNF4Q9BXJ3 329 aa15.63■□□□□ 0.09
SHOX2-203ENST00000441443 LOC107984156A0A0G2JMH3 177 aa15.63■□□□□ 0.09
SHOX2-203ENST00000441443 ARL17AQ8IVW1 177 aa15.63■□□□□ 0.09
SHOX2-203ENST00000441443 IGLV11-55A0A075B6I3 123 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 PSMB2P49721 201 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 CDSNQ15517 529 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 CFAP126Q5VTH2 177 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 LINC01549A6NIU2 74 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 IGHV3-66A0A0C4DH42 116 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 LINC01548A6NM66 108 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 ZFP2Q6ZN57 461 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 VKORC1Q9BQB6 163 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 ONECUT1Q9UBC0 465 aa15.62■□□□□ 0.09
SHOX2-203ENST00000441443 F8VRH5 84 aa15.61■□□□□ 0.09
SHOX2-203ENST00000441443 H7C1H1 209 aa15.61■□□□□ 0.09
SHOX2-203ENST00000441443 LGALS1P09382 135 aaKnown RBP15.61■□□□□ 0.09
SHOX2-203ENST00000441443 SRSF2Q01130 221 aaKnown RBP15.61■□□□□ 0.09
SHOX2-203ENST00000441443 IGHV3OR16-13A0A075B7E8 117 aa15.6■□□□□ 0.09
SHOX2-203ENST00000441443 IGHV3-74A0A0B4J1X5 117 aa15.6■□□□□ 0.09
SHOX2-203ENST00000441443 LY6LH3BQJ8 138 aa15.6■□□□□ 0.09
SHOX2-203ENST00000441443 XGP55808 180 aa15.6■□□□□ 0.09
SHOX2-203ENST00000441443 NDPQ00604 133 aa15.6■□□□□ 0.09
SHOX2-203ENST00000441443 DLX4Q92988 240 aaPredicted RBP15.6■□□□□ 0.09
SHOX2-203ENST00000441443 RNF5Q99942 180 aa15.6■□□□□ 0.09
SHOX2-203ENST00000441443 B9A039 149 aa15.59■□□□□ 0.09
SHOX2-203ENST00000441443 SPRY2O43597 315 aa15.59■□□□□ 0.09
SHOX2-203ENST00000441443 CTSGP08311 255 aa15.59■□□□□ 0.09
SHOX2-203ENST00000441443 TMEM78Q5T7P6 136 aa15.59■□□□□ 0.09
SHOX2-203ENST00000441443 KLRD1Q13241 179 aa15.58■□□□□ 0.09
SHOX2-203ENST00000441443 SPANXN1Q5VSR9 72 aa15.58■□□□□ 0.09
SHOX2-203ENST00000441443 SCGB3A1Q96QR1 104 aa15.58■□□□□ 0.08
SHOX2-203ENST00000441443 PLEKHB2Q96CS7 222 aa15.57■□□□□ 0.08
SHOX2-203ENST00000441443 IGHV7-4-1A0A0J9YVY3 117 aa15.57■□□□□ 0.08
SHOX2-203ENST00000441443 SCGB1D4Q6XE38 83 aa15.57■□□□□ 0.08
SHOX2-203ENST00000441443 PRADC1Q9BSG0 188 aa15.57■□□□□ 0.08
SHOX2-203ENST00000441443 TGFAP01135 160 aa15.57■□□□□ 0.08
SHOX2-203ENST00000441443 SRSF9Q13242 221 aaKnown RBP eCLIP15.57■□□□□ 0.08
SHOX2-203ENST00000441443 ZNF672Q499Z4 452 aaPredicted RBP15.57■□□□□ 0.08
SHOX2-203ENST00000441443 Q6ZUT4 128 aa15.57■□□□□ 0.08
SHOX2-203ENST00000441443 AGPAT4-IT1Q9H0P7 198 aa15.57■□□□□ 0.08
SHOX2-203ENST00000441443 ZNF815PA8K554 130 aa15.56■□□□□ 0.08
SHOX2-203ENST00000441443 GATA3P23771 443 aa15.56■□□□□ 0.08
SHOX2-203ENST00000441443 TSPAN13O95857 204 aa15.56■□□□□ 0.08
SHOX2-203ENST00000441443 C5orf64Q2M2E5 130 aa15.56■□□□□ 0.08
SHOX2-203ENST00000441443 TMEM238LA0A1B0GVL6 79 aa15.55■□□□□ 0.08
SHOX2-203ENST00000441443 KLHL30-AS1Q8NEE0 82 aa15.55■□□□□ 0.08
SHOX2-203ENST00000441443 IGHV3-49A0A0A0MS15 119 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 CARD19Q96LW7 228 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 SMIM2Q9BVW6 85 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 PIEZO1Q92508 2521 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 PRSS29PA6NIE9 313 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 TRAV12-1A0A0B4J245 112 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 H3BVH4 76 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 SLC25A16P16260 332 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 ATP6V0E2Q8NHE4 81 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 RNF183Q96D59 192 aa15.54■□□□□ 0.08
SHOX2-203ENST00000441443 ZNF48Q96MX3 618 aaPredicted RBP15.54■□□□□ 0.08
SHOX2-203ENST00000441443 DPM3Q9P2X0 92 aa15.53■□□□□ 0.08
SHOX2-203ENST00000441443 LINC01619G3V211 115 aa15.53■□□□□ 0.08
SHOX2-203ENST00000441443 NEXN-AS1Q8NBZ9 246 aa15.53■□□□□ 0.08
SHOX2-203ENST00000441443 J3KRW8 73 aa15.52■□□□□ 0.08
SHOX2-203ENST00000441443 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.52■□□□□ 0.07
SHOX2-203ENST00000441443 NPBQ8NG41 125 aa15.52■□□□□ 0.07
SHOX2-203ENST00000441443 DEFB104AQ8WTQ1 72 aa15.52■□□□□ 0.07
SHOX2-203ENST00000441443 A6NJY4 79 aa15.51■□□□□ 0.07
SHOX2-203ENST00000441443 RPL39LQ96EH5 51 aaKnown RBP15.51■□□□□ 0.07
SHOX2-203ENST00000441443 UBE2D1P51668 147 aa15.5■□□□□ 0.07
SHOX2-203ENST00000441443 EMP1P54849 157 aa15.5■□□□□ 0.07
SHOX2-203ENST00000441443 BAALCQ8WXS3 180 aa15.5■□□□□ 0.07
SHOX2-203ENST00000441443 KIR2DL4Q99706 377 aa15.5■□□□□ 0.07
SHOX2-203ENST00000441443 MSRB2Q9Y3D2 182 aa15.5■□□□□ 0.07
SHOX2-203ENST00000441443 TOMM6Q96B49 74 aa15.5■□□□□ 0.07
SHOX2-203ENST00000441443 M0R381 172 aa15.49■□□□□ 0.07
SHOX2-203ENST00000441443 RASL10AQ92737 203 aa15.49■□□□□ 0.07
SHOX2-203ENST00000441443 BUB3O43684 328 aa15.49■□□□□ 0.07
SHOX2-203ENST00000441443 TCL1BO95988 128 aa15.49■□□□□ 0.07
SHOX2-203ENST00000441443 PPDPFLQ8WWR9 84 aa15.49■□□□□ 0.07
SHOX2-203ENST00000441443 CACNA1AO00555 2505 aa15.49■□□□□ 0.07
SHOX2-203ENST00000441443 UBE2D3P61077 147 aa15.48■□□□□ 0.07
SHOX2-203ENST00000441443 SUMO2P61956 95 aaKnown RBP15.48■□□□□ 0.07
SHOX2-203ENST00000441443 UBE2D2P62837 147 aa15.48■□□□□ 0.07
SHOX2-203ENST00000441443 ORMDL2Q53FV1 153 aa15.48■□□□□ 0.07
SHOX2-203ENST00000441443 C2orf66Q6UXQ4 117 aa15.48■□□□□ 0.07
SHOX2-203ENST00000441443 TEN1Q86WV5 123 aa15.48■□□□□ 0.07
SHOX2-203ENST00000441443 ADORA2A-AS1P86434 159 aa15.47■□□□□ 0.07
SHOX2-203ENST00000441443 LY6DQ14210 128 aa15.47■□□□□ 0.07
SHOX2-203ENST00000441443 CD7P09564 240 aa15.47■□□□□ 0.07
SHOX2-203ENST00000441443 HIF1ANQ9NWT6 349 aa15.47■□□□□ 0.07
SHOX2-203ENST00000441443 ITPR1Q14643 2758 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms