RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FXYD6Q9H0Q3 95 aa0.05□□□□□ -2.4
PFDN4-202ENST00000441080 TMEM14BQ9NUH8 114 aa0.05□□□□□ -2.4
PFDN4-202ENST00000441080 V9GYQ6 96 aa0.05□□□□□ -2.4
PFDN4-202ENST00000441080 A0A1B0GV72 72 aa0.04□□□□□ -2.4
PFDN4-202ENST00000441080 OTOSQ8NHW6 89 aa0.04□□□□□ -2.4
PFDN4-202ENST00000441080 NINQ8N4C6 2090 aa0.04□□□□□ -2.4
PFDN4-202ENST00000441080 FXYD6-FXYD2A0A087WZ82 144 aa0.03□□□□□ -2.4
PFDN4-202ENST00000441080 UQCRQO14949 82 aa0.03□□□□□ -2.4
PFDN4-202ENST00000441080 CCKP06307 115 aa0.03□□□□□ -2.4
PFDN4-202ENST00000441080 FABP1P07148 127 aa0.03□□□□□ -2.4
PFDN4-202ENST00000441080 UNQ5815/PRO19632Q6UWF5 114 aa0.03□□□□□ -2.4
PFDN4-202ENST00000441080 CENPHQ9H3R5 247 aa0.03□□□□□ -2.4
PFDN4-202ENST00000441080 SMPXQ9UHP9 88 aa0.03□□□□□ -2.4
PFDN4-202ENST00000441080 TRPM7Q96QT4 1865 aa0.03□□□□□ -2.41
PFDN4-202ENST00000441080 A0A096LNT2 108 aa0.02□□□□□ -2.41
PFDN4-202ENST00000441080 PGRMC1O00264 195 aaKnown RBP0.02□□□□□ -2.41
PFDN4-202ENST00000441080 IFNA21P01568 189 aa0.02□□□□□ -2.41
PFDN4-202ENST00000441080 KRTAP6-1Q3LI64 71 aa0.02□□□□□ -2.41
PFDN4-202ENST00000441080 TMEM128Q5BJH2 165 aa0.02□□□□□ -2.41
PFDN4-202ENST00000441080 SAMD13Q5VXD3 122 aa0.02□□□□□ -2.41
PFDN4-202ENST00000441080 TOMM20LQ6UXN7 152 aa0.02□□□□□ -2.41
PFDN4-202ENST00000441080 CCDC115Q96NT0 180 aa0.02□□□□□ -2.41
PFDN4-202ENST00000441080 ATG2AQ2TAZ0 1938 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 PTPRZ1P23471 2315 aaPredicted RBP0.01□□□□□ -2.41
PFDN4-202ENST00000441080 C10orf142B7Z368 130 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 PCBD1P61457 104 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 SPAG11BQ08648 103 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 KRTAP19-8Q3LI54 63 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 KRTAP20-2Q3LI61 65 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 KRTAP19-7Q3SYF9 63 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 Q5XG85 94 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 VMO1Q7Z5L0 202 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 OR4S1Q8NGB4 309 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 PROK2Q9HC23 129 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 CPDO75976 1380 aa0.01□□□□□ -2.41
PFDN4-202ENST00000441080 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.01□□□□□ -2.41
PFDN4-202ENST00000441080 FAM92AA1XBS5 289 aa0□□□□□ -2.41
PFDN4-202ENST00000441080 K7EQZ3 153 aa0□□□□□ -2.41
PFDN4-202ENST00000441080 SLC25A5P05141 298 aaKnown RBP0□□□□□ -2.41
PFDN4-202ENST00000441080 ADCYAP1P18509 176 aa0□□□□□ -2.41
PFDN4-202ENST00000441080 POLR2JP52435 117 aaKnown RBP0□□□□□ -2.41
PFDN4-202ENST00000441080 ALX1Q15699 326 aa0□□□□□ -2.41
PFDN4-202ENST00000441080 KLK9Q2XQG4 91 aa0□□□□□ -2.41
PFDN4-202ENST00000441080 ZCCHC6Q5VYS8 1495 aaKnown RBP0□□□□□ -2.41
PFDN4-202ENST00000441080 SPAG11AQ6PDA7 123 aa0□□□□□ -2.41
PFDN4-202ENST00000441080 TMEM35BQ8NCS4 154 aa0□□□□□ -2.41
PFDN4-202ENST00000441080 U3KQA8 63 aa0□□□□□ -2.41
PFDN4-202ENST00000441080 ZFYVE26Q68DK2 2539 aa-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 RBBP6Q7Z6E9 1792 aaKnown RBP-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 CDK12Q9NYV4 1490 aaPredicted RBP-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 PNMA8CA0A1B0GUJ8 204 aa-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 MPC1LP0DKB6 136 aa-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 SDC4P31431 198 aa-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 TFAMQ00059 246 aaKnown RBP-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 COX6A2Q02221 97 aa-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 DEFB109BQ30KR1 87 aa-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 Q5BKY6 102 aa-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 DSTQ03001 7570 aaKnown RBP-0.01□□□□□ -2.41
PFDN4-202ENST00000441080 TRAV22A0A0B4J277 110 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 TRBV10-1A0A0K0K1A3 114 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 H0YGG7 62 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 APOC4-APOC2K7ER74 178 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 M0R3E3 92 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 NPFFO15130 113 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 AKR1D1P51857 326 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 DEFA5Q01523 94 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 DPH3Q96FX2 82 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 NPVFQ9HCQ7 196 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 SPAG17Q6Q759 2223 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 KDM6BO15054 1643 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 ESPL1Q14674 2120 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 NEBP20929 6669 aa-0.02□□□□□ -2.41
PFDN4-202ENST00000441080 TTC28Q96AY4 2481 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 MED23Q9ULK4 1368 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 ANKRD17O75179 2603 aaKnown RBP-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 F2Z2F3 143 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 TCRAP04437 139 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 S100GP29377 79 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 PSPHP78330 225 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 Q8IZM0 81 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 DSCR8Q96T75 97 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 PRO0255Q9UI72 69 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 PIEZO1Q92508 2521 aa-0.03□□□□□ -2.41
PFDN4-202ENST00000441080 PTPRGP23470 1445 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 BLMP54132 1417 aaPredicted RBP-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 CACNA1HO95180 2353 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 H3BNG1 76 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 SYS1-DBNDD2H3BUS1 97 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 HIST1H1BP16401 226 aaKnown RBP-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 MT4P47944 62 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 RBM3P98179 157 aaKnown RBP-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 AKAP14Q86UN6 197 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 PRR15LQ9BU68 103 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 AGPAT4-IT1Q9H0P7 198 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 METTL1Q9UBP6 276 aaKnown RBP-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 AFDNP55196 1824 aaKnown RBP-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 ABCA12Q86UK0 2595 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 ARHGAP31Q2M1Z3 1444 aa-0.04□□□□□ -2.42
PFDN4-202ENST00000441080 FER1L6Q2WGJ9 1857 aa-0.05□□□□□ -2.42
PFDN4-202ENST00000441080 TRAV17A0A0B4J275 112 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 609.2 ms