RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 SIVA1O15304 175 aa8.15□□□□□ -1.1
PDGFB-203ENST00000440375 ATP6V0CP27449 155 aa8.15□□□□□ -1.1
PDGFB-203ENST00000440375 TDRG1Q3Y452 100 aa8.15□□□□□ -1.1
PDGFB-203ENST00000440375 FAM74A1Q5RGS3 127 aa8.15□□□□□ -1.1
PDGFB-203ENST00000440375 LYPD5Q6UWN5 251 aa8.15□□□□□ -1.1
PDGFB-203ENST00000440375 OR2G3Q8NGZ4 309 aa8.15□□□□□ -1.1
PDGFB-203ENST00000440375 RAB24Q969Q5 203 aa8.15□□□□□ -1.1
PDGFB-203ENST00000440375 TNFRSF18Q9Y5U5 241 aa8.15□□□□□ -1.1
PDGFB-203ENST00000440375 LOC100131303A0A0U1RQF7 123 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 K7EQD1 137 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 CDK2AP2O75956 126 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 TYMSP04818 313 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 STAG3L2P0CL84 134 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 STAG3L3P0CL85 134 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 GYPEP15421 78 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 GCHFRP30047 84 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 SLAQ13239 276 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 MRPL23Q16540 153 aaKnown RBP8.14□□□□□ -1.11
PDGFB-203ENST00000440375 RPL7L1Q6DKI1 246 aaKnown RBP8.14□□□□□ -1.11
PDGFB-203ENST00000440375 SPXQ9BT56 116 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 TREM1Q9NP99 234 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 C11orf21Q9P2W6 132 aa8.14□□□□□ -1.11
PDGFB-203ENST00000440375 TRAV4A0A0B4J268 109 aa8.13□□□□□ -1.11
PDGFB-203ENST00000440375 TRAV21A0A0B4J279 112 aa8.13□□□□□ -1.11
PDGFB-203ENST00000440375 GGTLC3B5MD39 225 aa8.13□□□□□ -1.11
PDGFB-203ENST00000440375 BTF3P20290 206 aaKnown RBP8.13□□□□□ -1.11
PDGFB-203ENST00000440375 FUSP35637 526 aaKnown RBP eCLIP8.13□□□□□ -1.11
PDGFB-203ENST00000440375 ZNF80P51504 273 aaPredicted RBP8.13□□□□□ -1.11
PDGFB-203ENST00000440375 NEGR1Q7Z3B1 354 aa8.13□□□□□ -1.11
PDGFB-203ENST00000440375 WFDC10BQ8IUB3 73 aa8.13□□□□□ -1.11
PDGFB-203ENST00000440375 IQCF2Q8IXL9 164 aa8.13□□□□□ -1.11
PDGFB-203ENST00000440375 ARL6IP6Q8N6S5 226 aa8.13□□□□□ -1.11
PDGFB-203ENST00000440375 PSMG3Q9BT73 122 aaPredicted RBP8.13□□□□□ -1.11
PDGFB-203ENST00000440375 BORCS7-ASMTA0A0B4J1R7 106 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 HMSDA8MTL9 139 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 M0R2P5 195 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 IGLV2-11P01706 119 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 TCRAP04437 139 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 SRIP30626 198 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 AKAP14Q86UN6 197 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 TCTE3Q8IZS6 198 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 TMEM75Q8N9X5 138 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 C5orf17Q8NAS9 161 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 SUN5Q8TC36 379 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 SDF2L1Q9HCN8 221 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 CYTL1Q9NRR1 136 aa8.12□□□□□ -1.11
PDGFB-203ENST00000440375 ZNF345Q14585 488 aa8.11□□□□□ -1.11
PDGFB-203ENST00000440375 DPPA3Q6W0C5 159 aa8.11□□□□□ -1.11
PDGFB-203ENST00000440375 KCNRGQ8N5I3 272 aa8.11□□□□□ -1.11
PDGFB-203ENST00000440375 MAPKAPK5-AS1Q8N8E1 139 aa8.11□□□□□ -1.11
PDGFB-203ENST00000440375 OR4C5Q8NGB2 326 aa8.11□□□□□ -1.11
PDGFB-203ENST00000440375 PCNPQ8WW12 178 aaKnown RBP8.11□□□□□ -1.11
PDGFB-203ENST00000440375 TAAR5O14804 337 aa8.1□□□□□ -1.11
PDGFB-203ENST00000440375 GCGP01275 180 aa8.1□□□□□ -1.11
PDGFB-203ENST00000440375 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
PDGFB-203ENST00000440375 GATA1P15976 413 aaPredicted RBP8.1□□□□□ -1.11
PDGFB-203ENST00000440375 SUMO1P63165 101 aaKnown RBP8.1□□□□□ -1.11
PDGFB-203ENST00000440375 ZNF726P1Q15940 193 aa8.1□□□□□ -1.11
PDGFB-203ENST00000440375 NDFIP1Q9BT67 221 aa8.1□□□□□ -1.11
PDGFB-203ENST00000440375 PSG8Q9UQ74 426 aa8.1□□□□□ -1.11
PDGFB-203ENST00000440375 A0A0D9SG52 128 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 SERTM2A0A1B0GWG4 89 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 C9JCJ5 164 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 CXorf1O96002 111 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 MBP02144 154 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 ORM1P02763 201 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 SERF2P84101 59 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 FLI1Q01543 452 aaPredicted RBP8.09□□□□□ -1.11
PDGFB-203ENST00000440375 TMUB2Q71RG4 321 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 PRNTQ86SH4 94 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 CYB561D1Q8N8Q1 229 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 KCNS1Q96KK3 526 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 LINC00479Q96M42 142 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 EPDR1Q9UM22 224 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 LY96Q9Y6Y9 160 aa8.09□□□□□ -1.11
PDGFB-203ENST00000440375 TRAV34A0A0B4J273 112 aa8.08□□□□□ -1.12
PDGFB-203ENST00000440375 KANTRA0A1W2PQU2 76 aa8.08□□□□□ -1.12
PDGFB-203ENST00000440375 BCL2L11O43521 198 aa8.08□□□□□ -1.12
PDGFB-203ENST00000440375 C1QBP02746 253 aa8.08□□□□□ -1.12
PDGFB-203ENST00000440375 PFN1P07737 140 aaKnown RBP8.08□□□□□ -1.12
PDGFB-203ENST00000440375 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
PDGFB-203ENST00000440375 CFAP126Q5VTH2 177 aa8.08□□□□□ -1.12
PDGFB-203ENST00000440375 C9orf85Q96MD7 179 aa8.08□□□□□ -1.12
PDGFB-203ENST00000440375 TXNDC17Q9BRA2 123 aa8.08□□□□□ -1.12
PDGFB-203ENST00000440375 ZNF471Q9BX82 626 aaPredicted RBP8.08□□□□□ -1.12
PDGFB-203ENST00000440375 ACTR3CQ9C0K3 210 aaPredicted RBP8.08□□□□□ -1.12
PDGFB-203ENST00000440375 TMEM167BQ9NRX6 74 aa8.08□□□□□ -1.12
PDGFB-203ENST00000440375 IGHV3-73A0A0B4J1V6 119 aa8.07□□□□□ -1.12
PDGFB-203ENST00000440375 FBLL1A6NHQ2 334 aaKnown RBP8.07□□□□□ -1.12
PDGFB-203ENST00000440375 K7EQM0 130 aa8.07□□□□□ -1.12
PDGFB-203ENST00000440375 PFDN1O60925 122 aa8.07□□□□□ -1.12
PDGFB-203ENST00000440375 RNASE3P12724 160 aaKnown RBP8.07□□□□□ -1.12
PDGFB-203ENST00000440375 UBE2G2P60604 165 aa8.07□□□□□ -1.12
PDGFB-203ENST00000440375 SMUG1Q53HV7 270 aa8.07□□□□□ -1.12
PDGFB-203ENST00000440375 ZNF506Q5JVG8 444 aa8.07□□□□□ -1.12
PDGFB-203ENST00000440375 SLC25A29Q8N8R3 303 aa8.07□□□□□ -1.12
PDGFB-203ENST00000440375 NHLRC2Q8NBF2 726 aa8.07□□□□□ -1.12
PDGFB-203ENST00000440375 MSRB1Q9NZV6 116 aa8.07□□□□□ -1.12
PDGFB-203ENST00000440375 A0A087WTM6 91 aa8.06□□□□□ -1.12
PDGFB-203ENST00000440375 PGPEP1LA6NFU8 196 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms