RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 LY96Q9Y6Y9 160 aa9.42□□□□□ -0.9
NEK1-201ENST00000439128 TMEM89A2RUT3 159 aa9.42□□□□□ -0.9
NEK1-201ENST00000439128 RNASE13Q5GAN3 156 aaKnown RBP9.42□□□□□ -0.9
NEK1-201ENST00000439128 ADAMTSL5Q6ZMM2 481 aa9.42□□□□□ -0.9
NEK1-201ENST00000439128 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
NEK1-201ENST00000439128 TM2D2Q9BX73 214 aa9.41□□□□□ -0.9
NEK1-201ENST00000439128 HILS1P60008 231 aa9.41□□□□□ -0.9
NEK1-201ENST00000439128 IGLV10-54A0A075B6I4 117 aa9.41□□□□□ -0.9
NEK1-201ENST00000439128 CHAC1Q9BUX1 264 aa9.41□□□□□ -0.9
NEK1-201ENST00000439128 LAMTOR2Q9Y2Q5 125 aa9.41□□□□□ -0.9
NEK1-201ENST00000439128 IGLV11-55A0A075B6I3 123 aa9.41□□□□□ -0.9
NEK1-201ENST00000439128 MSMPQ1L6U9 139 aa9.41□□□□□ -0.9
NEK1-201ENST00000439128 KLF12Q9Y4X4 402 aa9.41□□□□□ -0.9
NEK1-201ENST00000439128 POU2AF1Q16633 256 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 TTC32Q5I0X7 151 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 C2orf66Q6UXQ4 117 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 FNDC4Q9H6D8 234 aaPredicted RBP9.4□□□□□ -0.9
NEK1-201ENST00000439128 ZNF492Q9P255 531 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 TIRAPP58753 221 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 ATXN8Q156A1 80 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 BUB3O43684 328 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 TAL2Q16559 108 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 SMR3AQ99954 134 aa9.4□□□□□ -0.9
NEK1-201ENST00000439128 RNF152Q8N8N0 203 aa9.4□□□□□ -0.91
NEK1-201ENST00000439128 TMEM141Q96I45 108 aa9.4□□□□□ -0.91
NEK1-201ENST00000439128 AGPAT4-IT1Q9H0P7 198 aa9.4□□□□□ -0.91
NEK1-201ENST00000439128 IFITM2Q01629 132 aa9.39□□□□□ -0.91
NEK1-201ENST00000439128 ZNF503Q96F45 646 aa9.39□□□□□ -0.91
NEK1-201ENST00000439128 FAM110AQ9BQ89 295 aa9.39□□□□□ -0.91
NEK1-201ENST00000439128 K7EQD1 137 aa9.39□□□□□ -0.91
NEK1-201ENST00000439128 KRTAP27-1Q3LI81 207 aa9.39□□□□□ -0.91
NEK1-201ENST00000439128 HHLA3Q9XRX5 114 aa9.39□□□□□ -0.91
NEK1-201ENST00000439128 K7ERU9 68 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 GPHB5Q86YW7 130 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 CTSGP08311 255 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 C16orf54Q6UWD8 224 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 HEATR5AQ86XA9 2040 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 MED13LQ71F56 2210 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 ZC2HC1AQ96GY0 325 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 I3L2K1 104 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 CFPP27918 469 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.38□□□□□ -0.91
NEK1-201ENST00000439128 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.38□□□□□ -0.91
NEK1-201ENST00000439128 IGKV2-29A2NJV5 120 aaPredicted RBP9.38□□□□□ -0.91
NEK1-201ENST00000439128 K7EIM0 57 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 TMEM61Q8N0U2 210 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 FXYD5Q96DB9 178 aa9.38□□□□□ -0.91
NEK1-201ENST00000439128 SPCS1Q9Y6A9 102 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 PROP1O75360 226 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 TRBV12-3P01733 135 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 AMTNQ6UX39 209 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 Q6ZSV7 163 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 TMEM131Q92545 1883 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 DENND4CQ5VZ89 1909 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 GAGE2EQ4V326 116 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 HIST2H2BDQ6DRA6 164 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 Q6ZWC4 215 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 ZNF48Q96MX3 618 aaPredicted RBP9.37□□□□□ -0.91
NEK1-201ENST00000439128 NDUFAF3Q9BU61 184 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 GAGE2DQ9UEU5 116 aa9.37□□□□□ -0.91
NEK1-201ENST00000439128 H3BUT2 72 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 K7EMT4 169 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 FAM104BQ5XKR9 115 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 FANCD2OSQ96PS1 177 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 NOTCH3Q9UM47 2321 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 IGLV1-47P01700 117 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 C22orf34Q6ZV56 151 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 Q8N8P6 123 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 DDTP30046 118 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 CYYR1Q96J86 154 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 ACACBO00763 2458 aa9.36□□□□□ -0.91
NEK1-201ENST00000439128 GAGE2BQ13066 116 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 TRAV8-2A0A0B4J237 113 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 PRB2P02812 416 aaPredicted RBP9.35□□□□□ -0.91
NEK1-201ENST00000439128 UBE2CO00762 179 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 HERVK_113P63121 156 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 ZFAND6Q6FIF0 208 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 SCRT2Q9NQ03 307 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 PTPN13Q12923 2485 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 SPINK8P0C7L1 97 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 ESDP10768 282 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 MRPL51Q4U2R6 128 aaKnown RBP9.35□□□□□ -0.91
NEK1-201ENST00000439128 ZC2HC1BQ5TFG8 222 aa9.35□□□□□ -0.91
NEK1-201ENST00000439128 ASPHD1Q5U4P2 390 aa9.34□□□□□ -0.91
NEK1-201ENST00000439128 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
NEK1-201ENST00000439128 hDV102S1A0JD36 115 aa9.34□□□□□ -0.91
NEK1-201ENST00000439128 C5orf38Q86SI9 138 aa9.34□□□□□ -0.91
NEK1-201ENST00000439128 RBAKDNA6NC62 111 aa9.34□□□□□ -0.91
NEK1-201ENST00000439128 C5orf30Q96GV9 206 aa9.34□□□□□ -0.91
NEK1-201ENST00000439128 LINC00482Q8N8I6 264 aa9.33□□□□□ -0.92
NEK1-201ENST00000439128 MEGF9Q9H1U4 602 aa9.33□□□□□ -0.92
NEK1-201ENST00000439128 MAP6D1Q9H9H5 199 aa9.33□□□□□ -0.92
NEK1-201ENST00000439128 LYL1P12980 280 aa9.33□□□□□ -0.92
NEK1-201ENST00000439128 OVOL2Q9BRP0 275 aa9.33□□□□□ -0.92
NEK1-201ENST00000439128 CXCL1P09341 107 aa9.33□□□□□ -0.92
NEK1-201ENST00000439128 SMIM2Q9BVW6 85 aa9.33□□□□□ -0.92
NEK1-201ENST00000439128 GUSBP1Q15486 140 aa9.33□□□□□ -0.92
NEK1-201ENST00000439128 LY6G6CO95867 125 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms