RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 RNF185Q96GF1 192 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 ATP6V0BQ99437 205 aa8.14□□□□□ -1.11
SCAF4-203ENST00000434667 IGHV3-11P01762 117 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 THBDP07204 575 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 MC5RP33032 325 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 IGFL2Q6UWQ7 119 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 OR9G4Q8NGQ1 327 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 BUB1B-PAK6H3BSN5 160 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 CRYGBP07316 175 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 KLHL30-AS1Q8NEE0 82 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 PRR25Q96S07 402 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 NCOR1P1Q9H4R4 102 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 MRPS12O15235 138 aaKnown RBP8.13□□□□□ -1.11
SCAF4-203ENST00000434667 TNFRSF6BO95407 300 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 CRYBA4P53673 196 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 CLEC19AQ6UXS0 136 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 C14orf178Q8N769 122 aaPredicted RBP8.13□□□□□ -1.11
SCAF4-203ENST00000434667 LINC00477Q96M19 166 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 DOPEY1Q5JWR5 2465 aa8.13□□□□□ -1.11
SCAF4-203ENST00000434667 IL17RELQ6ZVW7 336 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 DYNAPQ8N1N2 210 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 TEX29Q8N6K0 151 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 SPAG8Q99932 426 aaPredicted RBP8.12□□□□□ -1.11
SCAF4-203ENST00000434667 A0A0G2JNJ9 132 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 RS1O15537 224 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 SNCGO76070 127 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 MFAP4P55083 255 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 Q9UFV3 132 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 KHDC1LQ5JSQ8 128 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 C11orf21Q9P2W6 132 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 SMAD5-AS1Q9Y6J3 95 aa8.12□□□□□ -1.11
SCAF4-203ENST00000434667 ZNF462Q96JM2 2506 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 ADARB2-AS1A8MUL3 147 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 PHLDA1Q8WV24 401 aaPredicted RBP8.11□□□□□ -1.11
SCAF4-203ENST00000434667 CFHR4Q92496 578 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 TMEM14CQ9P0S9 112 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 NAV2Q8IVL1 2488 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 IGHG4P01861 327 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 CCDC144NLQ6NUI1 221 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 ZNF493Q6ZR52 646 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 RNASE6Q93091 150 aaKnown RBP8.11□□□□□ -1.11
SCAF4-203ENST00000434667 FABP5P3A8MUU1 101 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 PRR30Q53SZ7 412 aaPredicted RBP8.11□□□□□ -1.11
SCAF4-203ENST00000434667 C21orf62Q9NYP8 219 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 U3KQK5 164 aa8.11□□□□□ -1.11
SCAF4-203ENST00000434667 MTORP42345 2549 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 IGLL5B9A064 214 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 C9JAW5 83 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 IGLV1-47P01700 117 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 IGF1P05019 195 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 SLC25A16P16260 332 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 DTX2Q86UW9 622 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 TNFRSF14Q92956 283 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 IGKV3OR2-268A0A0C4DH90 116 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 E7EQL1 145 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 RPL13AP40429 203 aaKnown RBP8.1□□□□□ -1.11
SCAF4-203ENST00000434667 PRRC2AP48634 2157 aaKnown RBP8.1□□□□□ -1.11
SCAF4-203ENST00000434667 HERVK_113P61574 105 aa8.1□□□□□ -1.11
SCAF4-203ENST00000434667 SPANXB1Q9NS25 103 aaPredicted RBP8.1□□□□□ -1.11
SCAF4-203ENST00000434667 F8W735 103 aaPredicted RBP8.09□□□□□ -1.11
SCAF4-203ENST00000434667 LY6EQ16553 131 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 CEND1Q8N111 149 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 CHTOPQ9Y3Y2 248 aaKnown RBP8.09□□□□□ -1.11
SCAF4-203ENST00000434667 ZFYVE26Q68DK2 2539 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 ABCA12Q86UK0 2595 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 TMEM238LA0A1B0GVL6 79 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 A6NJY4 79 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 FANCD2OSQ96PS1 177 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 IGHV3-73A0A0B4J1V6 119 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 GRNP28799 593 aaKnown RBP8.09□□□□□ -1.11
SCAF4-203ENST00000434667 RNASE4P34096 147 aaKnown RBP8.09□□□□□ -1.11
SCAF4-203ENST00000434667 C12orf74Q32Q52 190 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 LINC00311Q8N616 119 aa8.09□□□□□ -1.11
SCAF4-203ENST00000434667 A0A087WWL8 130 aa8.08□□□□□ -1.12
SCAF4-203ENST00000434667 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
SCAF4-203ENST00000434667 LGALS3P17931 250 aaKnown RBP8.08□□□□□ -1.12
SCAF4-203ENST00000434667 SMIM20Q8N5G0 67 aa8.08□□□□□ -1.12
SCAF4-203ENST00000434667 TNFRSF13BO14836 293 aaPredicted RBP8.08□□□□□ -1.12
SCAF4-203ENST00000434667 GAGE2BQ13066 116 aa8.08□□□□□ -1.12
SCAF4-203ENST00000434667 GAGE2EQ4V326 116 aa8.08□□□□□ -1.12
SCAF4-203ENST00000434667 GAGE2DQ9UEU5 116 aa8.08□□□□□ -1.12
SCAF4-203ENST00000434667 ATP5LO75964 103 aa8.08□□□□□ -1.12
SCAF4-203ENST00000434667 IGF2-ASQ6U949 168 aa8.08□□□□□ -1.12
SCAF4-203ENST00000434667 TIMD4Q96H15 378 aa8.08□□□□□ -1.12
SCAF4-203ENST00000434667 KLRB1Q12918 225 aa8.07□□□□□ -1.12
SCAF4-203ENST00000434667 PVRIGQ6DKI7 326 aa8.07□□□□□ -1.12
SCAF4-203ENST00000434667 ZNF625Q96I27 306 aaPredicted RBP8.07□□□□□ -1.12
SCAF4-203ENST00000434667 A8MWV9 139 aa8.07□□□□□ -1.12
SCAF4-203ENST00000434667 RNASE1P07998 156 aaKnown RBP8.07□□□□□ -1.12
SCAF4-203ENST00000434667 ZNF56Q15929 161 aa8.07□□□□□ -1.12
SCAF4-203ENST00000434667 ZFP2Q6ZN57 461 aa8.07□□□□□ -1.12
SCAF4-203ENST00000434667 IGLC6P0CF74 106 aa8.07□□□□□ -1.12
SCAF4-203ENST00000434667 FOXI2Q6ZQN5 318 aa8.06□□□□□ -1.12
SCAF4-203ENST00000434667 MT-ATP8P03928 68 aa8.06□□□□□ -1.12
SCAF4-203ENST00000434667 RNASE13Q5GAN3 156 aaKnown RBP8.06□□□□□ -1.12
SCAF4-203ENST00000434667 ZFAND6Q6FIF0 208 aa8.06□□□□□ -1.12
SCAF4-203ENST00000434667 DGAT2L7PQ6IED9 249 aa8.06□□□□□ -1.12
SCAF4-203ENST00000434667 TMEM219Q86XT9 240 aa8.06□□□□□ -1.12
SCAF4-203ENST00000434667 IGHV3OR16-12A0A075B7B8 117 aa8.06□□□□□ -1.12
SCAF4-203ENST00000434667 TSPAN13O95857 204 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms