RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ATP5G1P05496 136 aa12.95□□□□□ -0.34
HLA-F-220ENST00000434407 CCL20P78556 96 aa12.95□□□□□ -0.34
HLA-F-220ENST00000434407 SMUG1Q53HV7 270 aa12.95□□□□□ -0.34
HLA-F-220ENST00000434407 FAM159AQ6UWV7 190 aa12.95□□□□□ -0.34
HLA-F-220ENST00000434407 COX8CQ7Z4L0 72 aa12.95□□□□□ -0.34
HLA-F-220ENST00000434407 PCNPQ8WW12 178 aaKnown RBP12.95□□□□□ -0.34
HLA-F-220ENST00000434407 C18orf15Q96N68 181 aa12.95□□□□□ -0.34
HLA-F-220ENST00000434407 HTN3P15516 51 aa12.94□□□□□ -0.34
HLA-F-220ENST00000434407 Q6ZTI0 123 aa12.94□□□□□ -0.34
HLA-F-220ENST00000434407 Q86TA4 180 aa12.94□□□□□ -0.34
HLA-F-220ENST00000434407 FMC1Q96HJ9 113 aa12.94□□□□□ -0.34
HLA-F-220ENST00000434407 NDUFAF3Q9BU61 184 aa12.94□□□□□ -0.34
HLA-F-220ENST00000434407 TRGV11A0A075B6L2 103 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 GCGP01275 180 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 PFN1P07737 140 aaKnown RBP12.93□□□□□ -0.34
HLA-F-220ENST00000434407 BLOC1S1P78537 153 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 ZNF415Q09FC8 603 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 TMEM183BQ1AE95 376 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 LGALS9BQ3B8N2 356 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 TMEM183AQ8IXX5 376 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 MANBALQ9NQG1 85 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 MDFICQ9P1T7 246 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 C11orf21Q9P2W6 132 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 ZFP30Q9Y2G7 519 aa12.93□□□□□ -0.34
HLA-F-220ENST00000434407 GAGE12BA1L429 117 aa12.92□□□□□ -0.34
HLA-F-220ENST00000434407 GAGE7O76087 117 aa12.92□□□□□ -0.34
HLA-F-220ENST00000434407 LY6G6CO95867 125 aa12.92□□□□□ -0.34
HLA-F-220ENST00000434407 GAGE12FP0CL80 117 aa12.92□□□□□ -0.34
HLA-F-220ENST00000434407 GAGE12GP0CL81 117 aa12.92□□□□□ -0.34
HLA-F-220ENST00000434407 GAGE12IP0CL82 117 aa12.92□□□□□ -0.34
HLA-F-220ENST00000434407 IGHV3-16A0A0C4DH30 117 aa12.91□□□□□ -0.34
HLA-F-220ENST00000434407 TEX46H3BTG2 121 aa12.91□□□□□ -0.34
HLA-F-220ENST00000434407 LTAP01374 205 aa12.91□□□□□ -0.34
HLA-F-220ENST00000434407 TMEM88Q6PEY1 159 aa12.91□□□□□ -0.34
HLA-F-220ENST00000434407 KCNS1Q96KK3 526 aa12.91□□□□□ -0.34
HLA-F-220ENST00000434407 SPXQ9BT56 116 aa12.91□□□□□ -0.34
HLA-F-220ENST00000434407 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
HLA-F-220ENST00000434407 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 SCO2A0A1W2PP80 73 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 LINC00862A6NCI5 91 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 F5H768 121 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 GNRH2O43555 120 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 TYMSP04818 313 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 AKR1C3P42330 323 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 TXNDC17Q9BRA2 123 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 SDF2L1Q9HCN8 221 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 GNG13Q9P2W3 67 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 NACAE9PAV3 2078 aa12.9□□□□□ -0.34
HLA-F-220ENST00000434407 S100A9P06702 114 aaKnown RBP12.89□□□□□ -0.35
HLA-F-220ENST00000434407 UBE2G1P62253 170 aa12.89□□□□□ -0.35
HLA-F-220ENST00000434407 C15orf53Q8NAA6 179 aa12.89□□□□□ -0.35
HLA-F-220ENST00000434407 RASL10AQ92737 203 aa12.89□□□□□ -0.35
HLA-F-220ENST00000434407 FABP5P3A8MUU1 101 aa12.88□□□□□ -0.35
HLA-F-220ENST00000434407 HOXA5P20719 270 aa12.88□□□□□ -0.35
HLA-F-220ENST00000434407 CRIP1P50238 77 aa12.88□□□□□ -0.35
HLA-F-220ENST00000434407 SLC7A5P1Q8MH63 180 aa12.88□□□□□ -0.35
HLA-F-220ENST00000434407 C11orf52Q96A22 123 aa12.88□□□□□ -0.35
HLA-F-220ENST00000434407 ZC2HC1AQ96GY0 325 aa12.88□□□□□ -0.35
HLA-F-220ENST00000434407 TRGV2A0A075B6R0 118 aa12.87□□□□□ -0.35
HLA-F-220ENST00000434407 LYPD6BQ8NI32 183 aa12.87□□□□□ -0.35
HLA-F-220ENST00000434407 MED9Q9NWA0 146 aa12.87□□□□□ -0.35
HLA-F-220ENST00000434407 MRPL16Q9NX20 251 aaKnown RBP12.87□□□□□ -0.35
HLA-F-220ENST00000434407 IGKV3D-20A0A0C4DH25 116 aa12.86□□□□□ -0.35
HLA-F-220ENST00000434407 ZNF674Q2M3X9 581 aa12.86□□□□□ -0.35
HLA-F-220ENST00000434407 MLST8Q9BVC4 326 aa12.86□□□□□ -0.35
HLA-F-220ENST00000434407 M0R2P5 195 aa12.85□□□□□ -0.35
HLA-F-220ENST00000434407 P0DMU3 169 aa12.85□□□□□ -0.35
HLA-F-220ENST00000434407 FAM231AP0DMU4 169 aa12.85□□□□□ -0.35
HLA-F-220ENST00000434407 FAM231CP0DMU5 169 aa12.85□□□□□ -0.35
HLA-F-220ENST00000434407 C9orf85Q96MD7 179 aa12.85□□□□□ -0.35
HLA-F-220ENST00000434407 H3BNG1 76 aa12.84□□□□□ -0.35
HLA-F-220ENST00000434407 IFNA1P01562 189 aa12.84□□□□□ -0.35
HLA-F-220ENST00000434407 BCL2P10415 239 aa12.84□□□□□ -0.35
HLA-F-220ENST00000434407 MEF2BQ02080 365 aaPredicted RBP12.84□□□□□ -0.35
HLA-F-220ENST00000434407 FAM162BQ5T6X4 162 aa12.84□□□□□ -0.35
HLA-F-220ENST00000434407 COMMD7Q86VX2 200 aa12.84□□□□□ -0.35
HLA-F-220ENST00000434407 ZNF575Q86XF7 245 aa12.84□□□□□ -0.35
HLA-F-220ENST00000434407 TRAV26-1A0A087WT03 109 aa12.83□□□□□ -0.36
HLA-F-220ENST00000434407 SH2D1AO60880 128 aa12.83□□□□□ -0.36
HLA-F-220ENST00000434407 RNASE3P12724 160 aaKnown RBP12.83□□□□□ -0.36
HLA-F-220ENST00000434407 TAGLN2P37802 199 aaKnown RBP12.83□□□□□ -0.36
HLA-F-220ENST00000434407 OR5I1Q13606 314 aa12.83□□□□□ -0.36
HLA-F-220ENST00000434407 DNLZQ5SXM8 178 aa12.83□□□□□ -0.36
HLA-F-220ENST00000434407 POM121L12Q8N7R1 296 aa12.83□□□□□ -0.36
HLA-F-220ENST00000434407 PTH2Q96A98 100 aa12.83□□□□□ -0.36
HLA-F-220ENST00000434407 VAX2Q9UIW0 290 aa12.83□□□□□ -0.36
HLA-F-220ENST00000434407 PDE6DO43924 150 aa12.82□□□□□ -0.36
HLA-F-220ENST00000434407 RPL35P42766 123 aaKnown RBP12.82□□□□□ -0.36
HLA-F-220ENST00000434407 BAGE2Q86Y30 109 aa12.82□□□□□ -0.36
HLA-F-220ENST00000434407 DERL1Q9BUN8 251 aa12.82□□□□□ -0.36
HLA-F-220ENST00000434407 KRBOX1C9JBD0 128 aa12.81□□□□□ -0.36
HLA-F-220ENST00000434407 LINC01559Q495D7 138 aa12.81□□□□□ -0.36
HLA-F-220ENST00000434407 VSIG2Q96IQ7 327 aa12.81□□□□□ -0.36
HLA-F-220ENST00000434407 TRAV4A0A0B4J268 109 aa12.8□□□□□ -0.36
HLA-F-220ENST00000434407 B4DEV8 164 aa12.8□□□□□ -0.36
HLA-F-220ENST00000434407 ORM1P02763 201 aa12.8□□□□□ -0.36
HLA-F-220ENST00000434407 FHL2Q14192 279 aa12.8□□□□□ -0.36
HLA-F-220ENST00000434407 RNF212Q495C1 297 aa12.8□□□□□ -0.36
HLA-F-220ENST00000434407 NHLRC2Q8NBF2 726 aa12.8□□□□□ -0.36
HLA-F-220ENST00000434407 A0A0J9YY99 117 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms