RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 A0A1B0GW15 77 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 IGHV4-59P01825 116 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 C11orf44Q8N8P7 122 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 OR5A1Q8NGJ0 315 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 CHCHD1Q96BP2 118 aaKnown RBP8.83□□□□□ -1
CLDN4-202ENST00000431918 CCDC140Q96MF4 163 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 PRSS22Q9GZN4 317 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 F6UB75 175 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 HAX1O00165 279 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 MRAP2Q96G30 205 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 SMG1Q96Q15 3661 aaKnown RBP8.83□□□□□ -1
CLDN4-202ENST00000431918 AGPAT4-IT1Q9H0P7 198 aa8.83□□□□□ -1
CLDN4-202ENST00000431918 SEC11AP67812 179 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 CD300EQ496F6 205 aaPredicted RBP8.82□□□□□ -1
CLDN4-202ENST00000431918 Q8N6K4 173 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 NACAE9PAV3 2078 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 IGLV2-11P01706 119 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 ZNF688P0C7X2 276 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 FCER1GP30273 86 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 ID1P41134 155 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 BEX4Q9NWD9 120 aaPredicted RBP8.82□□□□□ -1
CLDN4-202ENST00000431918 FAM223BA6NKX1 122 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 SYS1-DBNDD2H3BUS1 97 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 EBI3Q14213 229 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 FAM223AQ8IWN6 122 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 CRIP1P50238 77 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 FAM74A4Q5TZK3 123 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 CITED1Q99966 193 aa8.82□□□□□ -1
CLDN4-202ENST00000431918 K7EP34 96 aa8.81□□□□□ -1
CLDN4-202ENST00000431918 ZNF80P51504 273 aaPredicted RBP8.81□□□□□ -1
CLDN4-202ENST00000431918 CACNG7P62955 275 aa8.81□□□□□ -1
CLDN4-202ENST00000431918 FOXE3Q13461 319 aa8.81□□□□□ -1
CLDN4-202ENST00000431918 DEFB112Q30KQ8 113 aa8.81□□□□□ -1
CLDN4-202ENST00000431918 UNQ9165/PRO28630Q6UXU0 137 aa8.81□□□□□ -1
CLDN4-202ENST00000431918 Q8N976 141 aa8.81□□□□□ -1
CLDN4-202ENST00000431918 MRPL51Q4U2R6 128 aaKnown RBP8.81□□□□□ -1
CLDN4-202ENST00000431918 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
CLDN4-202ENST00000431918 A0A1B0GXF2 115 aa8.81□□□□□ -1
CLDN4-202ENST00000431918 F8W735 103 aaPredicted RBP8.8□□□□□ -1
CLDN4-202ENST00000431918 LEPP41159 167 aa8.8□□□□□ -1
CLDN4-202ENST00000431918 HERV-K104P63124 156 aa8.8□□□□□ -1
CLDN4-202ENST00000431918 C9orf139Q6ZV77 190 aa8.8□□□□□ -1
CLDN4-202ENST00000431918 LINC01356Q8N9X3 169 aa8.8□□□□□ -1
CLDN4-202ENST00000431918 C9orf118A6NHY6 69 aa8.8□□□□□ -1
CLDN4-202ENST00000431918 FAM159AQ6UWV7 190 aa8.8□□□□□ -1
CLDN4-202ENST00000431918 ADAMTSL5Q6ZMM2 481 aa8.8□□□□□ -1
CLDN4-202ENST00000431918 SMAD5-AS1Q9Y6J3 95 aa8.8□□□□□ -1
CLDN4-202ENST00000431918 FLNCQ14315 2725 aa8.8□□□□□ -1
CLDN4-202ENST00000431918 KIR3DS1Q14943 382 aa8.79□□□□□ -1
CLDN4-202ENST00000431918 PSMG4Q5JS54 123 aa8.79□□□□□ -1
CLDN4-202ENST00000431918 USMG5Q96IX5 58 aa8.79□□□□□ -1
CLDN4-202ENST00000431918 NPYP01303 97 aa8.79□□□□□ -1
CLDN4-202ENST00000431918 ASIPP42127 132 aa8.79□□□□□ -1
CLDN4-202ENST00000431918 ANAPC13Q9BS18 74 aa8.79□□□□□ -1
CLDN4-202ENST00000431918 TRAV26-2A0A0B4J265 109 aa8.79□□□□□ -1
CLDN4-202ENST00000431918 GATA1P15976 413 aaPredicted RBP8.79□□□□□ -1
CLDN4-202ENST00000431918 Q6ZS46 218 aa8.79□□□□□ -1
CLDN4-202ENST00000431918 MYOZ3Q8TDC0 251 aa8.79□□□□□ -1
CLDN4-202ENST00000431918 HBDP02042 147 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 GCSHP23434 173 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 SYNJ2BPP57105 145 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 KLF5Q13887 457 aaPredicted RBP8.78□□□□□ -1
CLDN4-202ENST00000431918 SIGLEC8Q9NYZ4 499 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 TMEM8BA6NDV4 472 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 SHISA2Q6UWI4 295 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 DAZ1Q9NQZ3 744 aaKnown RBP8.78□□□□□ -1
CLDN4-202ENST00000431918 TRAV21A0A0B4J279 112 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 SLC25A16P16260 332 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 DSCR9P59020 149 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 ASH1LQ9NR48 2969 aaKnown RBP8.78□□□□□ -1
CLDN4-202ENST00000431918 IFI27L1Q96BM0 104 aa8.78□□□□□ -1
CLDN4-202ENST00000431918 A0A1W2PRX2 142 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 CD7P09564 240 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 SAMD5Q5TGI4 173 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 SMIM20Q8N5G0 67 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 C14orf178Q8N769 122 aaPredicted RBP8.77□□□□□ -1.01
CLDN4-202ENST00000431918 DYNLRB2Q8TF09 96 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 FOXC2Q99958 501 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 SNRPD3P62318 126 aaKnown RBP8.77□□□□□ -1.01
CLDN4-202ENST00000431918 BOD1L2Q8IYS8 172 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 TMEM160Q9NX00 188 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 TRAV12-3A0A0B4J271 114 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 NDUFA4O00483 81 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 AJUBAQ96IF1 538 aa8.77□□□□□ -1.01
CLDN4-202ENST00000431918 H3BRM9 83 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 SPINK8P0C7L1 97 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 B5MCH6 92 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 OVOL1O14753 267 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 MRPS12O15235 138 aaKnown RBP8.76□□□□□ -1.01
CLDN4-202ENST00000431918 AVPP01185 164 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 SMIM13P0DJ93 91 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 ETDBQ3ZM63 59 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 MRPL16Q9NX20 251 aaKnown RBP8.76□□□□□ -1.01
CLDN4-202ENST00000431918 HIVEP2P31629 2446 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 TNFRSF6BO95407 300 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 SMPXQ9UHP9 88 aa8.76□□□□□ -1.01
CLDN4-202ENST00000431918 C10orf99Q6UWK7 81 aa8.75□□□□□ -1.01
CLDN4-202ENST00000431918 FASNP49327 2511 aaKnown RBP8.75□□□□□ -1.01
CLDN4-202ENST00000431918 NPIPB6E9PJ23 425 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 222 ms