RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 RNASE13Q5GAN3 156 aaKnown RBP10.07□□□□□ -0.8
PTCH1-207ENST00000429896 UTF1Q5T230 341 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 NEGR1Q7Z3B1 354 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 POLR3KQ9Y2Y1 108 aaPredicted RBP10.07□□□□□ -0.8
PTCH1-207ENST00000429896 TRAV25A0A0B4J276 109 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 CRYGCP07315 174 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 PIEZO2Q9H5I5 2752 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 MTURNQ8N3F0 131 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 GNB1LQ9BYB4 327 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 HILS1P60008 231 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 GAGE6Q13070 117 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 PRIMA1Q86XR5 153 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 RASL10AQ92737 203 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 LEPROTO15243 131 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 C2orf82Q6UX34 121 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 CFHR4Q92496 578 aa10.06□□□□□ -0.8
PTCH1-207ENST00000429896 HAPLN4Q86UW8 402 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 HIST3H2BBQ8N257 126 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 CEP295Q9C0D2 2601 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 K7EIM0 57 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 ZNF491Q8N8L2 437 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 ZNF561-AS1K7EIQ3 104 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 PCNTO95613 3336 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 CHD9Q3L8U1 2897 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 FAM90A2PQ658T7 463 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 TMEM256Q8N2U0 113 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 ZMAT4Q9H898 229 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 TMEM14CQ9P0S9 112 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 CPAMD8Q8IZJ3 1885 aa10.05□□□□□ -0.8
PTCH1-207ENST00000429896 TRBV19A0A075B6N1 114 aa10.04□□□□□ -0.8
PTCH1-207ENST00000429896 TMEM238C9JI98 176 aa10.04□□□□□ -0.8
PTCH1-207ENST00000429896 GP9P14770 177 aa10.04□□□□□ -0.8
PTCH1-207ENST00000429896 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
PTCH1-207ENST00000429896 Q6ZSV7 163 aa10.04□□□□□ -0.8
PTCH1-207ENST00000429896 CHCHD1Q96BP2 118 aaKnown RBP10.04□□□□□ -0.8
PTCH1-207ENST00000429896 CHD7Q9P2D1 2997 aa10.04□□□□□ -0.8
PTCH1-207ENST00000429896 PCSK5Q92824 1860 aa10.04□□□□□ -0.8
PTCH1-207ENST00000429896 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
PTCH1-207ENST00000429896 TIMM21Q9BVV7 248 aa10.04□□□□□ -0.8
PTCH1-207ENST00000429896 EBI3Q14213 229 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 LYPD6BQ8NI32 183 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 A0A0J9YY99 117 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 Q6ZPA2 131 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 TMEM126AQ9H061 195 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 AZU1P20160 251 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 ATP6V0BQ99437 205 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 KIAA1549Q9HCM3 1950 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 PMVKQ15126 192 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 IGHG4P01861 327 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 STPG4Q8N801 248 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 DEFB105AQ8NG35 78 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 HIST1H2BLQ99880 126 aa10.03□□□□□ -0.8
PTCH1-207ENST00000429896 VCYO14598 125 aa10.02□□□□□ -0.8
PTCH1-207ENST00000429896 IGF1P05019 195 aa10.02□□□□□ -0.8
PTCH1-207ENST00000429896 CTSGP08311 255 aa10.02□□□□□ -0.8
PTCH1-207ENST00000429896 LINC01551Q86U37 167 aa10.02□□□□□ -0.8
PTCH1-207ENST00000429896 SIGMAR1Q99720 223 aa10.02□□□□□ -0.8
PTCH1-207ENST00000429896 PPBPP02775 128 aa10.02□□□□□ -0.81
PTCH1-207ENST00000429896 DSCAMO60469 2012 aa10.02□□□□□ -0.81
PTCH1-207ENST00000429896 CRLF1O75462 422 aa10.02□□□□□ -0.81
PTCH1-207ENST00000429896 GHRHP01286 108 aa10.02□□□□□ -0.81
PTCH1-207ENST00000429896 TRAV12-1A0A0B4J245 112 aa10.02□□□□□ -0.81
PTCH1-207ENST00000429896 PRB2P02812 416 aaPredicted RBP10.02□□□□□ -0.81
PTCH1-207ENST00000429896 RASL11AQ6T310 242 aa10.02□□□□□ -0.81
PTCH1-207ENST00000429896 IGF2BP2-AS1Q96M15 143 aa10.02□□□□□ -0.81
PTCH1-207ENST00000429896 SNHG12Q9BXW3 62 aa10.02□□□□□ -0.81
PTCH1-207ENST00000429896 ARMS2P0C7Q2 107 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 EXPH5Q8NEV8 1989 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 LY96Q9Y6Y9 160 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 IGHV4-4A0A075B6R2 117 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 LINC01548A6NM66 108 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 AVPP01185 164 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 C1orf229Q6ZS94 237 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-207ENST00000429896 NKAPP1Q8N9T2 125 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 GPHB5Q86YW7 130 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 ATRXP46100 2492 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 NDUFS5O43920 106 aa10.01□□□□□ -0.81
PTCH1-207ENST00000429896 SRSF2Q01130 221 aaKnown RBP10□□□□□ -0.81
PTCH1-207ENST00000429896 HSD52Q0P140 79 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 FOXI2Q6ZQN5 318 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 Q9HAA7 133 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 DLX4Q92988 240 aaPredicted RBP10□□□□□ -0.81
PTCH1-207ENST00000429896 TMEM75Q8N9X5 138 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 C2orf70A6NJV1 201 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 INSL3P51460 131 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 SPTBN4Q9H254 2564 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 C9JAW5 83 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 PLEKHB2Q96CS7 222 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 TP53TG1Q9Y2A0 90 aa10□□□□□ -0.81
PTCH1-207ENST00000429896 E7EUB6 86 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 SPRY2O43597 315 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 Q86TA4 180 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 K7EMT4 169 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 RS1O15537 224 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 GTSF1LQ9H1H1 148 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 PROP1O75360 226 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 ZNRF2Q8NHG8 242 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 ZNF702PQ9H963 129 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 ZNF726P1Q15940 193 aa9.99□□□□□ -0.81
PTCH1-207ENST00000429896 KLF12Q9Y4X4 402 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms