RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 C2orf70A6NJV1 201 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 A8MWP6 167 aa10.79□□□□□ -0.68
RPL28-202ENST00000426763 NHP2Q9NX24 153 aaKnown RBP10.79□□□□□ -0.68
RPL28-202ENST00000426763 MRPL51Q4U2R6 128 aaKnown RBP10.78□□□□□ -0.68
RPL28-202ENST00000426763 RNF152Q8N8N0 203 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 MEGF9Q9H1U4 602 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 SYS1-DBNDD2H3BUS1 97 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 WIPF2Q8TF74 440 aaPredicted RBP10.78□□□□□ -0.68
RPL28-202ENST00000426763 TMEM141Q96I45 108 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 NCOA6Q14686 2063 aaPredicted RBP10.78□□□□□ -0.68
RPL28-202ENST00000426763 TRAV25A0A0B4J276 109 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 WI2-2373I1.2A0A1W2PRP0 233 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 Q0VG73 95 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 C2orf66Q6UXQ4 117 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 TIMM21Q9BVV7 248 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 GSN-AS1Q9NRJ2 163 aa10.78□□□□□ -0.68
RPL28-202ENST00000426763 PAX4O43316 350 aa10.77□□□□□ -0.68
RPL28-202ENST00000426763 C3orf79P0CE67 100 aa10.77□□□□□ -0.69
RPL28-202ENST00000426763 NOP10Q9NPE3 64 aaKnown RBP10.77□□□□□ -0.69
RPL28-202ENST00000426763 MED12LQ86YW9 2145 aa10.77□□□□□ -0.69
RPL28-202ENST00000426763 MYMXA0A1B0GTQ4 84 aa10.77□□□□□ -0.69
RPL28-202ENST00000426763 CITED2Q99967 270 aaPredicted RBP10.77□□□□□ -0.69
RPL28-202ENST00000426763 PATE2Q6UY27 113 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 IGF2BP2-AS1Q96M15 143 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 HSD52Q0P140 79 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 RHOHQ15669 191 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 Q6YL49 198 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 TRAV26-2A0A0B4J265 109 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 C18orf32Q8TCD1 76 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 U3KQE9 123 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 LRP4O75096 1905 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 PIFOQ8TCI5 191 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 JPT2Q9H910 190 aa10.76□□□□□ -0.69
RPL28-202ENST00000426763 EML6Q6ZMW3 1958 aa10.75□□□□□ -0.69
RPL28-202ENST00000426763 E7EUB6 86 aa10.75□□□□□ -0.69
RPL28-202ENST00000426763 IGHV3-38A0A0C4DH36 116 aa10.75□□□□□ -0.69
RPL28-202ENST00000426763 TEX48A0A1B0GUV7 120 aa10.75□□□□□ -0.69
RPL28-202ENST00000426763 GNRH2O43555 120 aa10.75□□□□□ -0.69
RPL28-202ENST00000426763 SCGB1A1P11684 91 aa10.75□□□□□ -0.69
RPL28-202ENST00000426763 ZC2HC1BQ5TFG8 222 aa10.75□□□□□ -0.69
RPL28-202ENST00000426763 ORAOV1Q8WV07 137 aa10.75□□□□□ -0.69
RPL28-202ENST00000426763 PRIMA1Q86XR5 153 aa10.75□□□□□ -0.69
RPL28-202ENST00000426763 ZNF48Q96MX3 618 aaPredicted RBP10.75□□□□□ -0.69
RPL28-202ENST00000426763 LOC105371267A0A1B0GV96 52 aa10.74□□□□□ -0.69
RPL28-202ENST00000426763 GAGE6Q13070 117 aa10.74□□□□□ -0.69
RPL28-202ENST00000426763 CFHR4Q92496 578 aa10.74□□□□□ -0.69
RPL28-202ENST00000426763 TNRC6AQ8NDV7 1962 aaKnown RBP10.74□□□□□ -0.69
RPL28-202ENST00000426763 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.74□□□□□ -0.69
RPL28-202ENST00000426763 TYMSP04818 313 aa10.74□□□□□ -0.69
RPL28-202ENST00000426763 EGR2P11161 476 aaPredicted RBP10.74□□□□□ -0.69
RPL28-202ENST00000426763 PAX2Q02962 417 aa10.74□□□□□ -0.69
RPL28-202ENST00000426763 RMI2Q96E14 147 aa10.74□□□□□ -0.69
RPL28-202ENST00000426763 SPCS1Q9Y6A9 102 aa10.74□□□□□ -0.69
RPL28-202ENST00000426763 HIST2H2BCQ6DN03 193 aa10.74□□□□□ -0.69
RPL28-202ENST00000426763 ZNF493Q6ZR52 646 aa10.74□□□□□ -0.69
RPL28-202ENST00000426763 COL5A1P20908 1838 aaPredicted RBP10.74□□□□□ -0.69
RPL28-202ENST00000426763 ZNF561-AS1K7EIQ3 104 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 C16orf74Q96GX8 76 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 CST9LQ9H4G1 147 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 IGF2RP11717 2491 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 PLA2G2AP14555 144 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 FANCD2OSQ96PS1 177 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 NDUFAF3Q9BU61 184 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 INSL3P51460 131 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 SMIM2Q9BVW6 85 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 PCNX3Q9H6A9 2034 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 C20orf78Q9BR46 151 aa10.73□□□□□ -0.69
RPL28-202ENST00000426763 PMVKQ15126 192 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 LYPD6BQ8NI32 183 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 hDV102S1A0JD36 115 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 H3BUT2 72 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 NPC2P61916 151 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 MORN5Q5VZ52 161 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 CHAC1Q9BUX1 264 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 PTPN13Q12923 2485 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 HLA-DRB4P13762 266 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 HLA-DRB4X5D2U9 266 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 KMT2EQ8IZD2 1858 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 A0A1B0GWB2 263 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 IGHG4P01861 327 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 CRIP3Q6Q6R5 217 aa10.72□□□□□ -0.69
RPL28-202ENST00000426763 K7EN84 100 aa10.71□□□□□ -0.69
RPL28-202ENST00000426763 ERG28Q9UKR5 140 aa10.71□□□□□ -0.69
RPL28-202ENST00000426763 A0A096LPF7 62 aa10.71□□□□□ -0.69
RPL28-202ENST00000426763 IGHV1-24A0A0C4DH33 117 aa10.71□□□□□ -0.69
RPL28-202ENST00000426763 INAFM1C9JVW0 142 aa10.71□□□□□ -0.69
RPL28-202ENST00000426763 C10orf91Q5T1B1 145 aa10.71□□□□□ -0.69
RPL28-202ENST00000426763 SPART-AS1P0CW21 52 aa10.71□□□□□ -0.7
RPL28-202ENST00000426763 NPYP01303 97 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 SFTA2Q6UW10 78 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 NDUFA11Q86Y39 141 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 MRPL36Q9P0J6 103 aaKnown RBP10.7□□□□□ -0.7
RPL28-202ENST00000426763 IGF1P05019 195 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 ASPHD1Q5U4P2 390 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 A0A0J9YY99 117 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 FAM167A-AS1Q96KT0 104 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 LEPROTO15243 131 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 PROP1O75360 226 aa10.7□□□□□ -0.7
RPL28-202ENST00000426763 PGPEP1Q9NXJ5 209 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms