RNA–Protein interactions for RNA: ENST00000426635.6

LINC00472-203, long intergenic non-protein coding RNA 472, humanhuman

TSL 2 BASIC

Gene LINC00472, Length 2,958 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-203ENST00000426635 C1orf162Q8NEQ5 155 aaPredicted RBP13.07□□□□□ -0.32
LINC00472-203ENST00000426635 GATA4P43694 442 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 CCL8P80075 99 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 C2orf66Q6UXQ4 117 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 IL17RELQ6ZVW7 336 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 DYNAPQ8N1N2 210 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 TMEM105Q8N8V8 129 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 C11orf21Q9P2W6 132 aa13.07□□□□□ -0.32
LINC00472-203ENST00000426635 TIMM23O14925 209 aa13.06□□□□□ -0.32
LINC00472-203ENST00000426635 LINC01620Q4KN68 170 aa13.06□□□□□ -0.32
LINC00472-203ENST00000426635 ORMDL2Q53FV1 153 aa13.06□□□□□ -0.32
LINC00472-203ENST00000426635 SPANXN1Q5VSR9 72 aa13.06□□□□□ -0.32
LINC00472-203ENST00000426635 IGHV3OR16-8A0A075B7F1 116 aa13.06□□□□□ -0.32
LINC00472-203ENST00000426635 A4D1N5 150 aa13.06□□□□□ -0.32
LINC00472-203ENST00000426635 CRYGBP07316 175 aa13.06□□□□□ -0.32
LINC00472-203ENST00000426635 DEFB104AQ8WTQ1 72 aa13.06□□□□□ -0.32
LINC00472-203ENST00000426635 NRGNQ92686 78 aa13.06□□□□□ -0.32
LINC00472-203ENST00000426635 C11orf86A6NJI1 115 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 PRAC2D3DTV9 90 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 IGHG4P01861 327 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 SRSF2Q01130 221 aaKnown RBP13.05□□□□□ -0.32
LINC00472-203ENST00000426635 TIMD4Q96H15 378 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 WNK2Q9Y3S1 2297 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 H3BMM0 161 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 UBE2WQ96B02 151 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 MUC3AQ02505 3323 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 IGHV3-33P01772 117 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 TSPEAR-AS2P59090 65 aa13.05□□□□□ -0.32
LINC00472-203ENST00000426635 SPRY2O43597 315 aa13.04□□□□□ -0.32
LINC00472-203ENST00000426635 EIF4EBP3O60516 100 aaPredicted RBP13.04□□□□□ -0.32
LINC00472-203ENST00000426635 GLRXP35754 106 aa13.04□□□□□ -0.32
LINC00472-203ENST00000426635 CXCL12P48061 93 aa13.04□□□□□ -0.32
LINC00472-203ENST00000426635 SLC25A29Q8N8R3 303 aa13.04□□□□□ -0.32
LINC00472-203ENST00000426635 SPENQ96T58 3664 aaKnown RBP13.04□□□□□ -0.32
LINC00472-203ENST00000426635 SLC25A15Q9Y619 301 aa13.04□□□□□ -0.32
LINC00472-203ENST00000426635 PATE3B3GLJ2 98 aa13.04□□□□□ -0.32
LINC00472-203ENST00000426635 LGALS9O00182 355 aa13.04□□□□□ -0.32
LINC00472-203ENST00000426635 ATXN8Q156A1 80 aa13.03□□□□□ -0.32
LINC00472-203ENST00000426635 GFRALQ6UXV0 394 aa13.03□□□□□ -0.32
LINC00472-203ENST00000426635 LINC00311Q8N616 119 aa13.03□□□□□ -0.32
LINC00472-203ENST00000426635 RPL39LQ96EH5 51 aaKnown RBP13.03□□□□□ -0.32
LINC00472-203ENST00000426635 CEP250Q9BV73 2442 aa13.03□□□□□ -0.32
LINC00472-203ENST00000426635 DUSP14O95147 198 aaKnown RBP13.03□□□□□ -0.32
LINC00472-203ENST00000426635 HERVK_113P61574 105 aa13.03□□□□□ -0.32
LINC00472-203ENST00000426635 ZNF672Q499Z4 452 aaPredicted RBP13.03□□□□□ -0.32
LINC00472-203ENST00000426635 PMS2CLQ68D20 193 aa13.03□□□□□ -0.32
LINC00472-203ENST00000426635 C14orf178Q8N769 122 aaPredicted RBP13.03□□□□□ -0.32
LINC00472-203ENST00000426635 IGHV3-23P01764 117 aa13.02□□□□□ -0.32
LINC00472-203ENST00000426635 SUMO2P61956 95 aaKnown RBP13.02□□□□□ -0.32
LINC00472-203ENST00000426635 MRPL23Q16540 153 aaKnown RBP13.02□□□□□ -0.32
LINC00472-203ENST00000426635 C5orf47Q569G3 176 aa13.02□□□□□ -0.32
LINC00472-203ENST00000426635 CSMD1Q96PZ7 3565 aa13.02□□□□□ -0.32
LINC00472-203ENST00000426635 RPL13AP40429 203 aaKnown RBP13.02□□□□□ -0.33
LINC00472-203ENST00000426635 RNF182Q8N6D2 247 aa13.02□□□□□ -0.33
LINC00472-203ENST00000426635 SMAD5-AS1Q9Y6J3 95 aa13.02□□□□□ -0.33
LINC00472-203ENST00000426635 IGHV7-4-1A0A0J9YVY3 117 aa13.02□□□□□ -0.33
LINC00472-203ENST00000426635 OOSP1A8MZH6 123 aa13.02□□□□□ -0.33
LINC00472-203ENST00000426635 TEX36Q5VZQ5 186 aa13.02□□□□□ -0.33
LINC00472-203ENST00000426635 LYPD2Q6UXB3 125 aa13.02□□□□□ -0.33
LINC00472-203ENST00000426635 DUX3Q96PT4 197 aa13.02□□□□□ -0.33
LINC00472-203ENST00000426635 LOC400499M0QZD8 3231 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 TMEM170BQ5T4T1 132 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 DMXL2Q8TDJ6 3036 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 CACNA1GO43497 2377 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 ARHGAP32A7KAX9 2087 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 PKDREJQ9NTG1 2253 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 RP1L1Q8IWN7 2480 aaPredicted RBP13.01□□□□□ -0.33
LINC00472-203ENST00000426635 IGLV3-9A0A075B6K5 115 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 IGHV3-35A0A0C4DH35 117 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 CRYGDP07320 174 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 C2orf82Q6UX34 121 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 DNAJC30Q96LL9 226 aa13.01□□□□□ -0.33
LINC00472-203ENST00000426635 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
LINC00472-203ENST00000426635 TRBV10-2A0A0K0K1G8 114 aa13□□□□□ -0.33
LINC00472-203ENST00000426635 PRSS33Q8NF86 280 aa13□□□□□ -0.33
LINC00472-203ENST00000426635 FAM236AA0A1B0GUQ0 79 aa12.99□□□□□ -0.33
LINC00472-203ENST00000426635 FAM236BA0A1B0GV22 79 aa12.99□□□□□ -0.33
LINC00472-203ENST00000426635 C9orf153Q5TBE3 101 aa12.99□□□□□ -0.33
LINC00472-203ENST00000426635 IGLV4-69A0A075B6H9 119 aa12.99□□□□□ -0.33
LINC00472-203ENST00000426635 HES1Q14469 280 aa12.99□□□□□ -0.33
LINC00472-203ENST00000426635 P0DMU3 169 aa12.99□□□□□ -0.33
LINC00472-203ENST00000426635 FAM231AP0DMU4 169 aa12.99□□□□□ -0.33
LINC00472-203ENST00000426635 FAM231CP0DMU5 169 aa12.99□□□□□ -0.33
LINC00472-203ENST00000426635 ATP1A1-AS1Q5TC04 95 aa12.99□□□□□ -0.33
LINC00472-203ENST00000426635 NDUFB3O43676 98 aa12.98□□□□□ -0.33
LINC00472-203ENST00000426635 TNRC18O15417 2968 aaPredicted RBP12.98□□□□□ -0.33
LINC00472-203ENST00000426635 TRGV11A0A075B6L2 103 aa12.98□□□□□ -0.33
LINC00472-203ENST00000426635 IGHV1-3A0A0C4DH29 117 aa12.98□□□□□ -0.33
LINC00472-203ENST00000426635 IGHV1-8P0DP01 117 aa12.98□□□□□ -0.33
LINC00472-203ENST00000426635 KLK5Q9Y337 293 aaPredicted RBP12.98□□□□□ -0.33
LINC00472-203ENST00000426635 M0R381 172 aa12.97□□□□□ -0.33
LINC00472-203ENST00000426635 TACC2O95359 2948 aa12.97□□□□□ -0.33
LINC00472-203ENST00000426635 CEMP1Q6PRD7 247 aaPredicted RBP12.97□□□□□ -0.33
LINC00472-203ENST00000426635 SLC50A1Q9BRV3 221 aa12.97□□□□□ -0.33
LINC00472-203ENST00000426635 SMIM9A6NGZ8 99 aa12.96□□□□□ -0.33
LINC00472-203ENST00000426635 DLX6P56179 175 aa12.96□□□□□ -0.33
LINC00472-203ENST00000426635 MUSTN1Q8IVN3 82 aa12.96□□□□□ -0.33
LINC00472-203ENST00000426635 MGPP08493 103 aa12.96□□□□□ -0.33
LINC00472-203ENST00000426635 LGALS3P17931 250 aaKnown RBP12.96□□□□□ -0.33
LINC00472-203ENST00000426635 C8orf31Q8N9H6 132 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms