RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 UBE2D1P51668 147 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 SELENOTP62341 195 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 SMCO1Q147U7 214 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 CNPY1Q3B7I2 92 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 RNASE10Q5GAN6 216 aaKnown RBP3.91□□□□□ -1.78
SDCBP-203ENST00000424270 PRR9Q5T870 116 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 CYB561D1Q8N8Q1 229 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 OR13C8Q8NGS7 320 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 MRPL53Q96EL3 112 aaKnown RBP3.91□□□□□ -1.78
SDCBP-203ENST00000424270 AGPAT4-IT1Q9H0P7 198 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 C20orf85Q9H1P6 137 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 HSPB7Q9UBY9 170 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 STRAPQ9Y3F4 350 aaKnown RBP3.91□□□□□ -1.78
SDCBP-203ENST00000424270 TIMM9Q9Y5J7 89 aa3.91□□□□□ -1.78
SDCBP-203ENST00000424270 IGKV2-40A0A087WW87 121 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-203ENST00000424270 CCDC160A6NGH7 325 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 M0R3E3 92 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 GOSR2O14653 212 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 ZNF253O75346 499 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 IGKV2D-40P01614 121 aaPredicted RBP3.9□□□□□ -1.79
SDCBP-203ENST00000424270 TCRBP04435 133 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 NMBP08949 121 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 MGST1P10620 155 aaKnown RBP3.9□□□□□ -1.79
SDCBP-203ENST00000424270 SDC2P34741 201 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 ZNF138P52744 262 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 GABARAPL2P60520 117 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 ZNF876PQ49A33 203 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 UBE2NLQ5JXB2 153 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 ATRAIDQ6UW56 229 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 SNX29P2Q8IUI4 249 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 AAMDCQ9H7C9 122 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 NAA60Q9H7X0 242 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 TXNL4BQ9NX01 149 aaKnown RBP3.9□□□□□ -1.79
SDCBP-203ENST00000424270 ANAPC10Q9UM13 185 aa3.9□□□□□ -1.79
SDCBP-203ENST00000424270 TRAV1-1A0A0B4J248 108 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 MUC21A0A0G2JKD1 596 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 H0Y8G0 127 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 H3BQ15 152 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 WRBO00258 174 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 AGPAT2O15120 278 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 MRPS12O15235 138 aaKnown RBP3.89□□□□□ -1.79
SDCBP-203ENST00000424270 TSPAN13O95857 204 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 CRISP2P16562 243 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 TMBIM6P55061 237 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 COX6A2Q02221 97 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 SRSF9Q13242 221 aaKnown RBP eCLIP3.89□□□□□ -1.79
SDCBP-203ENST00000424270 SURF2Q15527 256 aaPredicted RBP3.89□□□□□ -1.79
SDCBP-203ENST00000424270 SPANXN5Q5MJ07 72 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 C10orf113Q5VZT2 155 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 CLPSL2Q6UWE3 100 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 ZNF546Q86UE3 836 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 ZFAND2AQ8N6M9 145 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 SAMD12Q8N8I0 201 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 OR51S1Q8NGJ8 323 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 GLYATL2Q8WU03 294 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 RAB2BQ8WUD1 216 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 BCL7BQ9BQE9 202 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 TPPP3Q9BW30 176 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 RBM38Q9H0Z9 239 aaKnown RBP3.89□□□□□ -1.79
SDCBP-203ENST00000424270 DUSP21Q9H596 190 aa3.89□□□□□ -1.79
SDCBP-203ENST00000424270 RSL24D1Q9UHA3 163 aaKnown RBP3.89□□□□□ -1.79
SDCBP-203ENST00000424270 H3BP45 60 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 GNRH2O43555 120 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 CIDEAO60543 219 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 PAGE4O60829 102 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 MED6O75586 246 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 TBPP20226 339 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 INPP1P49441 399 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 FGF8P55075 233 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-203ENST00000424270 RRAS2P62070 204 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-203ENST00000424270 CNBPP62633 177 aaKnown RBP3.88□□□□□ -1.79
SDCBP-203ENST00000424270 SLC38A11Q08AI6 406 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 CFAP126Q5VTH2 177 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 ENHOQ6UWT2 76 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 PRSS48Q7RTY5 328 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 CLVS1Q8IUQ0 354 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-203ENST00000424270 INO80EQ8NBZ0 244 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-203ENST00000424270 OR2T35Q8NGX2 323 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 FAM19A4Q96LR4 140 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 CIB3Q96Q77 187 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-203ENST00000424270 CHCHD7Q9BUK0 85 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 GPN1Q9HCN4 374 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-203ENST00000424270 PRELID1Q9Y255 219 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 KCNIP3Q9Y2W7 256 aa3.88□□□□□ -1.79
SDCBP-203ENST00000424270 LOC100506127A0A0U1RQW1 187 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 NDUFS6O75380 124 aaKnown RBP3.87□□□□□ -1.79
SDCBP-203ENST00000424270 MT-ND6P03923 174 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 S100A6P06703 90 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 IGLC2P0DOY2 106 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 PCP4P48539 62 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 PLP1P60201 277 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 MIAQ16674 131 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 PXDC1Q5TGL8 231 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 PATE2Q6UY27 113 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 CROCCP3Q8IVE0 287 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 EXOC3-AS1Q8N2X6 119 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 LINC00469Q8N7U9 141 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 OR2G3Q8NGZ4 309 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 TERB2Q8NHR7 220 aa3.87□□□□□ -1.79
SDCBP-203ENST00000424270 SOSTQ9BQB4 213 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms