RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 Q9HAA7 133 aa11.25□□□□□ -0.61
UPF3AP3-201ENST00000420996 TRAV21A0A0B4J279 112 aa11.24□□□□□ -0.61
UPF3AP3-201ENST00000420996 FAM240BA0A1B0GVZ2 78 aa11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 TYMSP04818 313 aa11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 KHDC3LQ587J8 217 aa11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 OR10J3Q5JRS4 329 aa11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 SLC25A29Q8N8R3 303 aa11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 KCNS1Q96KK3 526 aa11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 HYLS1Q96M11 299 aa11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 OTORQ9NRC9 128 aa11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 OR5AC2Q9NZP5 309 aa11.23□□□□□ -0.61
UPF3AP3-201ENST00000420996 PGPA6NDG6 321 aa11.22□□□□□ -0.61
UPF3AP3-201ENST00000420996 CIDEAO60543 219 aa11.22□□□□□ -0.61
UPF3AP3-201ENST00000420996 PLA2G1BP04054 148 aaKnown RBP11.22□□□□□ -0.61
UPF3AP3-201ENST00000420996 TAS2R45P59539 299 aa11.22□□□□□ -0.61
UPF3AP3-201ENST00000420996 ARL6IP6Q8N6S5 226 aa11.22□□□□□ -0.61
UPF3AP3-201ENST00000420996 ATP5SQ99766 215 aa11.22□□□□□ -0.61
UPF3AP3-201ENST00000420996 PRADC1Q9BSG0 188 aa11.22□□□□□ -0.61
UPF3AP3-201ENST00000420996 SDF2L1Q9HCN8 221 aa11.22□□□□□ -0.61
UPF3AP3-201ENST00000420996 TRBV6-4A0A1B0GX49 114 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 H0YIZ8 118 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 IGHV3-30P01768 117 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 IGHV3-33P01772 117 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 IGHV3-30-3P0DP02 117 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 IGHV3-30-5P0DP03 117 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 LAGE3Q14657 143 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 FFAR4Q5NUL3 377 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 FAM74A1Q5RGS3 127 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 LELP1Q5T871 98 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 CMTM2Q8TAZ6 248 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 CCDC32Q9BV29 185 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 TM2D2Q9BX73 214 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 NMES1Q9C002 83 aa11.21□□□□□ -0.61
UPF3AP3-201ENST00000420996 KRTAP29-1A8MX34 341 aaPredicted RBP11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 SIX6O95475 246 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 RHOHQ15669 191 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 LRRC37A5PQ49AS3 106 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 Q6ZSA8 131 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 GOLT1AQ6ZVE7 132 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 ASB13Q8WXK3 278 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 TVP23CQ96ET8 276 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 TREM1Q9NP99 234 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 MBD2Q9UBB5 411 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 RPH3ALQ9UNE2 315 aa11.2□□□□□ -0.62
UPF3AP3-201ENST00000420996 F6UZH7 168 aa11.19□□□□□ -0.62
UPF3AP3-201ENST00000420996 RS1O15537 224 aa11.19□□□□□ -0.62
UPF3AP3-201ENST00000420996 CYCSP99999 105 aaKnown RBP11.19□□□□□ -0.62
UPF3AP3-201ENST00000420996 ZNF876PQ49A33 203 aa11.19□□□□□ -0.62
UPF3AP3-201ENST00000420996 CFAP126Q5VTH2 177 aa11.19□□□□□ -0.62
UPF3AP3-201ENST00000420996 MZT2BQ6NZ67 158 aa11.19□□□□□ -0.62
UPF3AP3-201ENST00000420996 GTSF1LQ9H1H1 148 aa11.19□□□□□ -0.62
UPF3AP3-201ENST00000420996 IFITM3Q01628 133 aa11.18□□□□□ -0.62
UPF3AP3-201ENST00000420996 ATP6V0E2Q8NHE4 81 aa11.18□□□□□ -0.62
UPF3AP3-201ENST00000420996 DNAH8Q96JB1 4490 aa11.17□□□□□ -0.62
UPF3AP3-201ENST00000420996 TRAV8-1A0A0A6YYK1 113 aa11.17□□□□□ -0.62
UPF3AP3-201ENST00000420996 WFDC2Q14508 124 aa11.17□□□□□ -0.62
UPF3AP3-201ENST00000420996 DPPA3Q6W0C5 159 aa11.17□□□□□ -0.62
UPF3AP3-201ENST00000420996 LINC00299Q6ZSB3 139 aa11.17□□□□□ -0.62
UPF3AP3-201ENST00000420996 LINC00528Q8N1L1 170 aa11.17□□□□□ -0.62
UPF3AP3-201ENST00000420996 SCGB1C1Q8TD33 95 aa11.17□□□□□ -0.62
UPF3AP3-201ENST00000420996 DEFB104AQ8WTQ1 72 aa11.17□□□□□ -0.62
UPF3AP3-201ENST00000420996 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
UPF3AP3-201ENST00000420996 EIF3GO75821 320 aaKnown RBP eCLIP11.16□□□□□ -0.62
UPF3AP3-201ENST00000420996 PQLC2Q6ZP29 291 aa11.16□□□□□ -0.62
UPF3AP3-201ENST00000420996 HSPB11Q9Y547 144 aa11.16□□□□□ -0.62
UPF3AP3-201ENST00000420996 MGST1P10620 155 aaKnown RBP11.15□□□□□ -0.62
UPF3AP3-201ENST00000420996 ASAH1Q13510 395 aa11.15□□□□□ -0.62
UPF3AP3-201ENST00000420996 PTH2Q96A98 100 aa11.15□□□□□ -0.62
UPF3AP3-201ENST00000420996 C9orf85Q96MD7 179 aa11.15□□□□□ -0.62
UPF3AP3-201ENST00000420996 NDFIP1Q9BT67 221 aa11.15□□□□□ -0.62
UPF3AP3-201ENST00000420996 SH3BGRL3Q9H299 93 aa11.15□□□□□ -0.62
UPF3AP3-201ENST00000420996 TRAV8-3A0A0A6YYJ7 113 aa11.14□□□□□ -0.63
UPF3AP3-201ENST00000420996 GNG5P63218 68 aa11.14□□□□□ -0.63
UPF3AP3-201ENST00000420996 PPP1R1CQ8WVI7 109 aa11.14□□□□□ -0.63
UPF3AP3-201ENST00000420996 S100ZQ8WXG8 99 aa11.14□□□□□ -0.63
UPF3AP3-201ENST00000420996 C11orf21Q9P2W6 132 aa11.14□□□□□ -0.63
UPF3AP3-201ENST00000420996 SERTM2A0A1B0GWG4 89 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 A0A1W2PPV4 95 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 PGPEP1LA6NFU8 196 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 TAAR5O14804 337 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 LECT2O14960 151 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 UPK1BO75841 260 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 ZNF80P51504 273 aaPredicted RBP11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 H2BFSP57053 126 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 ACOT6Q3I5F7 207 aaPredicted RBP11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 ZNF506Q5JVG8 444 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 Q8N3U1 123 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 SGK494Q96LW2 274 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 SMIM3Q9BZL3 60 aa11.13□□□□□ -0.63
UPF3AP3-201ENST00000420996 TOR2AQ5JU69 321 aa11.12□□□□□ -0.63
UPF3AP3-201ENST00000420996 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.11□□□□□ -0.63
UPF3AP3-201ENST00000420996 GCGP01275 180 aa11.11□□□□□ -0.63
UPF3AP3-201ENST00000420996 RPL12P30050 165 aaKnown RBP11.11□□□□□ -0.63
UPF3AP3-201ENST00000420996 SERTAD4-AS1Q5TG53 156 aa11.11□□□□□ -0.63
UPF3AP3-201ENST00000420996 DAZ4Q86SG3 579 aaKnown RBP11.11□□□□□ -0.63
UPF3AP3-201ENST00000420996 ENKURQ8TC29 256 aa11.11□□□□□ -0.63
UPF3AP3-201ENST00000420996 BATF3Q9NR55 127 aa11.11□□□□□ -0.63
UPF3AP3-201ENST00000420996 DAZ3Q9NR90 486 aaKnown RBP11.11□□□□□ -0.63
UPF3AP3-201ENST00000420996 COX11Q9Y6N1 276 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms