RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 H0YIZ8 118 aa13.17□□□□□ -0.3
SYNGAP1-202ENST00000418600 MSMPQ1L6U9 139 aa13.17□□□□□ -0.3
SYNGAP1-202ENST00000418600 Q6ZRM9 215 aa13.17□□□□□ -0.3
SYNGAP1-202ENST00000418600 FAM110AQ9BQ89 295 aa13.17□□□□□ -0.3
SYNGAP1-202ENST00000418600 PLXNB3Q9ULL4 1909 aa13.17□□□□□ -0.3
SYNGAP1-202ENST00000418600 ZNF48Q96MX3 618 aaPredicted RBP13.16□□□□□ -0.3
SYNGAP1-202ENST00000418600 NUP35Q8NFH5 326 aa13.16□□□□□ -0.3
SYNGAP1-202ENST00000418600 INAFM2P0DMQ5 153 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 IGLV11-55A0A075B6I3 123 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 BTCP35070 178 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 PMVKQ15126 192 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 LINC01551Q86U37 167 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 ODF3BA8MYP8 253 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST1H2BKO60814 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST1H2BJP06899 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST1H2BOP23527 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST1H2BBP33778 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST1H2BDP58876 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST1H2BCP62807 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST2H2BEQ16778 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 LINC01006Q8NI28 216 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST1H2BHQ93079 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST1H2BNQ99877 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 HIST1H2BMQ99879 126 aa13.15□□□□□ -0.3
SYNGAP1-202ENST00000418600 DENND4AQ7Z401 1863 aa13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 RPL18AQ02543 176 aaKnown RBP13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 ALPK2Q86TB3 2170 aa13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 IGHG4P01861 327 aa13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 C22orf34Q6ZV56 151 aa13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 SOCS3O14543 225 aa13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 CDSNQ15517 529 aa13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 ZNF114Q8NC26 417 aa13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 PRB2P02812 416 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 POU2AF1Q16633 256 aa13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 ATP6V0E2Q8NHE4 81 aa13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 FGF23Q9GZV9 251 aaPredicted RBP13.14□□□□□ -0.31
SYNGAP1-202ENST00000418600 TP53BP1Q12888 1972 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-202ENST00000418600 PRSS29PA6NIE9 313 aa13.13□□□□□ -0.31
SYNGAP1-202ENST00000418600 NDUFA7O95182 113 aa13.13□□□□□ -0.31
SYNGAP1-202ENST00000418600 ESDP10768 282 aa13.13□□□□□ -0.31
SYNGAP1-202ENST00000418600 ZNF492Q9P255 531 aa13.13□□□□□ -0.31
SYNGAP1-202ENST00000418600 TRAV8-3A0A0A6YYJ7 113 aa13.13□□□□□ -0.31
SYNGAP1-202ENST00000418600 FAM231BA6NCW3 169 aa13.13□□□□□ -0.31
SYNGAP1-202ENST00000418600 KLF5Q13887 457 aaPredicted RBP13.13□□□□□ -0.31
SYNGAP1-202ENST00000418600 C16orf54Q6UWD8 224 aa13.12□□□□□ -0.31
SYNGAP1-202ENST00000418600 IGLV1-47P01700 117 aa13.12□□□□□ -0.31
SYNGAP1-202ENST00000418600 SUMO4Q6EEV6 95 aa13.12□□□□□ -0.31
SYNGAP1-202ENST00000418600 PHF3Q92576 2039 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-202ENST00000418600 TNRC6AQ8NDV7 1962 aaKnown RBP13.12□□□□□ -0.31
SYNGAP1-202ENST00000418600 K7EQD1 137 aa13.12□□□□□ -0.31
SYNGAP1-202ENST00000418600 COL5A1P20908 1838 aaPredicted RBP13.11□□□□□ -0.31
SYNGAP1-202ENST00000418600 ADAMTSL5Q6ZMM2 481 aa13.11□□□□□ -0.31
SYNGAP1-202ENST00000418600 SPANXDQ9BXN6 97 aa13.11□□□□□ -0.31
SYNGAP1-202ENST00000418600 LRRK1Q38SD2 2015 aa13.11□□□□□ -0.31
SYNGAP1-202ENST00000418600 FSTL3O95633 263 aa13.11□□□□□ -0.31
SYNGAP1-202ENST00000418600 GAGE2AQ6NT46 116 aa13.11□□□□□ -0.31
SYNGAP1-202ENST00000418600 TIRAPP58753 221 aa13.1□□□□□ -0.31
SYNGAP1-202ENST00000418600 HHLA3Q9XRX5 114 aa13.1□□□□□ -0.31
SYNGAP1-202ENST00000418600 SPANXA1Q9NS26 97 aa13.1□□□□□ -0.31
SYNGAP1-202ENST00000418600 DEFB131BA0A096LNP1 70 aa13.1□□□□□ -0.31
SYNGAP1-202ENST00000418600 PRSS46E5RG02 174 aa13.1□□□□□ -0.31
SYNGAP1-202ENST00000418600 MAP6D1Q9H9H5 199 aa13.09□□□□□ -0.31
SYNGAP1-202ENST00000418600 CFPP27918 469 aa13.09□□□□□ -0.31
SYNGAP1-202ENST00000418600 C14orf177Q52M58 125 aa13.09□□□□□ -0.31
SYNGAP1-202ENST00000418600 ZC2HC1BQ5TFG8 222 aa13.09□□□□□ -0.31
SYNGAP1-202ENST00000418600 HIST1H2BLQ99880 126 aa13.09□□□□□ -0.31
SYNGAP1-202ENST00000418600 PTPRQQ9UMZ3 2332 aa13.09□□□□□ -0.31
SYNGAP1-202ENST00000418600 SYS1-DBNDD2H3BUS1 97 aa13.09□□□□□ -0.31
SYNGAP1-202ENST00000418600 TMEM61Q8N0U2 210 aa13.09□□□□□ -0.31
SYNGAP1-202ENST00000418600 OCIAD2Q56VL3 154 aa13.08□□□□□ -0.31
SYNGAP1-202ENST00000418600 C1orf147Q96MC9 270 aaPredicted RBP13.08□□□□□ -0.31
SYNGAP1-202ENST00000418600 TP53TG1Q9Y2A0 90 aa13.08□□□□□ -0.31
SYNGAP1-202ENST00000418600 NCKAP5O14513 1909 aa13.08□□□□□ -0.32
SYNGAP1-202ENST00000418600 I3L2K1 104 aa13.08□□□□□ -0.32
SYNGAP1-202ENST00000418600 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
SYNGAP1-202ENST00000418600 ZNF702PQ9H963 129 aa13.08□□□□□ -0.32
SYNGAP1-202ENST00000418600 SRSF3P84103 164 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-202ENST00000418600 AMN1Q8IY45 258 aa13.08□□□□□ -0.32
SYNGAP1-202ENST00000418600 MUC22E2RYF6 1773 aaPredicted RBP13.08□□□□□ -0.32
SYNGAP1-202ENST00000418600 POLEQ07864 2286 aa13.07□□□□□ -0.32
SYNGAP1-202ENST00000418600 Q8N8P6 123 aa13.07□□□□□ -0.32
SYNGAP1-202ENST00000418600 ZNF503Q96F45 646 aa13.07□□□□□ -0.32
SYNGAP1-202ENST00000418600 LINC00482Q8N8I6 264 aa13.07□□□□□ -0.32
SYNGAP1-202ENST00000418600 FANCD2OSQ96PS1 177 aa13.07□□□□□ -0.32
SYNGAP1-202ENST00000418600 HLA-DRB4P13762 266 aa13.07□□□□□ -0.32
SYNGAP1-202ENST00000418600 HLA-DRB4X5D2U9 266 aa13.07□□□□□ -0.32
SYNGAP1-202ENST00000418600 RBAKDNA6NC62 111 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 CTSGP08311 255 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 TAL2Q16559 108 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 ZNF295-AS1Q8N0V1 137 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 SNRNP200O75643 2136 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 TRAV10A0A0B4J240 114 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 PSMG3-AS1Q96PY0 264 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 UBL5Q9BZL1 73 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 TRBV12-3P01733 135 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 XCL1P47992 114 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 MRPL52Q86TS9 123 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 HIST3H2BBQ8N257 126 aa13.06□□□□□ -0.32
SYNGAP1-202ENST00000418600 HLA-DMBP28068 263 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms