RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 UBE2G2P60604 165 aa14.28□□□□□ -0.12
PKNOX1-202ENST00000418336 FLI1Q01543 452 aaPredicted RBP14.28□□□□□ -0.12
PKNOX1-202ENST00000418336 FHL2Q14192 279 aa14.28□□□□□ -0.12
PKNOX1-202ENST00000418336 FAM159AQ6UWV7 190 aa14.28□□□□□ -0.12
PKNOX1-202ENST00000418336 Q6ZNX1 250 aa14.28□□□□□ -0.12
PKNOX1-202ENST00000418336 MAP1LC3BQ9GZQ8 125 aa14.28□□□□□ -0.12
PKNOX1-202ENST00000418336 TRGV11A0A075B6L2 103 aa14.27□□□□□ -0.13
PKNOX1-202ENST00000418336 A0A096LPF7 62 aa14.27□□□□□ -0.13
PKNOX1-202ENST00000418336 A0A1B0GVY2 172 aa14.27□□□□□ -0.13
PKNOX1-202ENST00000418336 TRAV34A0A0B4J273 112 aa14.26□□□□□ -0.13
PKNOX1-202ENST00000418336 ESRGQ1W209 222 aa14.26□□□□□ -0.13
PKNOX1-202ENST00000418336 IQCF2Q8IXL9 164 aa14.26□□□□□ -0.13
PKNOX1-202ENST00000418336 MBD3L1Q8WWY6 194 aa14.26□□□□□ -0.13
PKNOX1-202ENST00000418336 NAGKQ9UJ70 344 aa14.26□□□□□ -0.13
PKNOX1-202ENST00000418336 TMUB2Q71RG4 321 aa14.25□□□□□ -0.13
PKNOX1-202ENST00000418336 PRNTQ86SH4 94 aa14.25□□□□□ -0.13
PKNOX1-202ENST00000418336 SPXQ9BT56 116 aa14.25□□□□□ -0.13
PKNOX1-202ENST00000418336 FBLL1A6NHQ2 334 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 PEX7O00628 323 aa14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 GCGP01275 180 aa14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 IGHV3-53P01767 116 aa14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 PFN1P07737 140 aaKnown RBP14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 COX8CQ7Z4L0 72 aa14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 ZNF575Q86XF7 245 aa14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 TCTE3Q8IZS6 198 aa14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 ZNF479Q96JC4 524 aa14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 ZNF471Q9BX82 626 aaPredicted RBP14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 ARL2-SNX15V9GYD0 113 aa14.24□□□□□ -0.13
PKNOX1-202ENST00000418336 K7EQM0 130 aa14.23□□□□□ -0.13
PKNOX1-202ENST00000418336 CRYBA4P53673 196 aa14.23□□□□□ -0.13
PKNOX1-202ENST00000418336 Q86TA4 180 aa14.23□□□□□ -0.13
PKNOX1-202ENST00000418336 STOML3Q8TAV4 291 aa14.23□□□□□ -0.13
PKNOX1-202ENST00000418336 NDFIP1Q9BT67 221 aa14.23□□□□□ -0.13
PKNOX1-202ENST00000418336 UPK3BQ9BT76 320 aa14.23□□□□□ -0.13
PKNOX1-202ENST00000418336 SFTA3P0C7M3 94 aa14.22□□□□□ -0.13
PKNOX1-202ENST00000418336 CCL18P55774 89 aa14.22□□□□□ -0.13
PKNOX1-202ENST00000418336 LGALSLQ3ZCW2 172 aaPredicted RBP14.22□□□□□ -0.13
PKNOX1-202ENST00000418336 LINC00336Q6ZUF6 198 aa14.22□□□□□ -0.13
PKNOX1-202ENST00000418336 HIST1H2BAQ96A08 127 aa14.22□□□□□ -0.13
PKNOX1-202ENST00000418336 C9orf85Q96MD7 179 aa14.22□□□□□ -0.13
PKNOX1-202ENST00000418336 KRTAP1-5Q9BYS1 174 aa14.22□□□□□ -0.13
PKNOX1-202ENST00000418336 NKX6-2Q9C056 277 aaPredicted RBP14.22□□□□□ -0.13
PKNOX1-202ENST00000418336 SDF2L1Q9HCN8 221 aa14.22□□□□□ -0.13
PKNOX1-202ENST00000418336 IGKV3D-20A0A0C4DH25 116 aa14.21□□□□□ -0.13
PKNOX1-202ENST00000418336 KANTRA0A1W2PQU2 76 aa14.21□□□□□ -0.13
PKNOX1-202ENST00000418336 UMAD1C9J7I0 102 aa14.21□□□□□ -0.13
PKNOX1-202ENST00000418336 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.13
PKNOX1-202ENST00000418336 CRIP1P50238 77 aa14.21□□□□□ -0.13
PKNOX1-202ENST00000418336 SMUG1Q53HV7 270 aa14.21□□□□□ -0.13
PKNOX1-202ENST00000418336 KCNS1Q96KK3 526 aa14.21□□□□□ -0.13
PKNOX1-202ENST00000418336 NBDYA0A0U1RRE5 68 aa14.2□□□□□ -0.14
PKNOX1-202ENST00000418336 M0R2P5 195 aa14.2□□□□□ -0.14
PKNOX1-202ENST00000418336 SAPCD1Q5SSQ6 148 aa14.2□□□□□ -0.14
PKNOX1-202ENST00000418336 DPPA3Q6W0C5 159 aa14.2□□□□□ -0.14
PKNOX1-202ENST00000418336 FAM213BQ8TBF2 198 aa14.2□□□□□ -0.14
PKNOX1-202ENST00000418336 PRO0255Q9UI72 69 aa14.2□□□□□ -0.14
PKNOX1-202ENST00000418336 MRPS16Q9Y3D3 137 aaKnown RBP14.2□□□□□ -0.14
PKNOX1-202ENST00000418336 TRBV6-1A0A0K0K1D8 114 aa14.19□□□□□ -0.14
PKNOX1-202ENST00000418336 IFNA7P01567 189 aa14.19□□□□□ -0.14
PKNOX1-202ENST00000418336 HHLA3Q9XRX5 114 aa14.19□□□□□ -0.14
PKNOX1-202ENST00000418336 TRAV4A0A0B4J268 109 aa14.18□□□□□ -0.14
PKNOX1-202ENST00000418336 PAX4O43316 350 aa14.18□□□□□ -0.14
PKNOX1-202ENST00000418336 PAGE4O60829 102 aa14.18□□□□□ -0.14
PKNOX1-202ENST00000418336 SFT2D1Q8WV19 159 aa14.18□□□□□ -0.14
PKNOX1-202ENST00000418336 PTH2Q96A98 100 aa14.18□□□□□ -0.14
PKNOX1-202ENST00000418336 ZC2HC1AQ96GY0 325 aa14.18□□□□□ -0.14
PKNOX1-202ENST00000418336 TCEAL7Q9BRU2 100 aa14.18□□□□□ -0.14
PKNOX1-202ENST00000418336 RYR1P21817 5038 aa14.18□□□□□ -0.14
PKNOX1-202ENST00000418336 Q9H8V8 135 aa14.17□□□□□ -0.14
PKNOX1-202ENST00000418336 LTAP01374 205 aa14.16□□□□□ -0.14
PKNOX1-202ENST00000418336 C1QBP02746 253 aa14.16□□□□□ -0.14
PKNOX1-202ENST00000418336 TPT1P13693 172 aaKnown RBP14.16□□□□□ -0.14
PKNOX1-202ENST00000418336 SLAQ13239 276 aa14.16□□□□□ -0.14
PKNOX1-202ENST00000418336 FMC1Q96HJ9 113 aa14.16□□□□□ -0.14
PKNOX1-202ENST00000418336 DNAH5Q8TE73 4624 aa14.16□□□□□ -0.14
PKNOX1-202ENST00000418336 PGPEP1LA6NFU8 196 aa14.15□□□□□ -0.14
PKNOX1-202ENST00000418336 PRSS29PA6NIE9 313 aa14.15□□□□□ -0.14
PKNOX1-202ENST00000418336 CCL20P78556 96 aa14.15□□□□□ -0.14
PKNOX1-202ENST00000418336 ZFP69Q49AA0 526 aa14.15□□□□□ -0.14
PKNOX1-202ENST00000418336 ICOSQ9Y6W8 199 aa14.15□□□□□ -0.14
PKNOX1-202ENST00000418336 A0A1B0GV50 99 aa14.14□□□□□ -0.15
PKNOX1-202ENST00000418336 K7EQD1 137 aa14.14□□□□□ -0.15
PKNOX1-202ENST00000418336 RS1O15537 224 aa14.14□□□□□ -0.15
PKNOX1-202ENST00000418336 PFDN1O60925 122 aa14.14□□□□□ -0.15
PKNOX1-202ENST00000418336 PPT1P50897 306 aa14.14□□□□□ -0.15
PKNOX1-202ENST00000418336 EIF5AP63241 154 aaKnown RBP14.14□□□□□ -0.15
PKNOX1-202ENST00000418336 C1orf134Q5TEV5 83 aa14.14□□□□□ -0.15
PKNOX1-202ENST00000418336 ZFP30Q9Y2G7 519 aa14.14□□□□□ -0.15
PKNOX1-202ENST00000418336 LRP1BQ9NZR2 4599 aa14.14□□□□□ -0.15
PKNOX1-202ENST00000418336 TRAV1-1A0A0B4J248 108 aa14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 TRGV4A0A0C4DH28 118 aa14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 FABP5P3A8MUU1 101 aa14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 H2AFB1P0C5Y9 115 aa14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 GATA1P15976 413 aaPredicted RBP14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 ZNF674Q2M3X9 581 aa14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 ZNF506Q5JVG8 444 aa14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 DNLZQ5SXM8 178 aa14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 CFAP126Q5VTH2 177 aa14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 CST9LP1Q5W188 147 aa14.13□□□□□ -0.15
PKNOX1-202ENST00000418336 LYPD5Q6UWN5 251 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms