RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 PLNP26678 52 aa13.71□□□□□ -0.21
SCARB1-203ENST00000415380 GLMPQ8WWB7 406 aa13.71□□□□□ -0.21
SCARB1-203ENST00000415380 NPFFO15130 113 aa13.7□□□□□ -0.22
SCARB1-203ENST00000415380 SPRY2O43597 315 aa13.7□□□□□ -0.22
SCARB1-203ENST00000415380 TMEM219Q86XT9 240 aa13.7□□□□□ -0.22
SCARB1-203ENST00000415380 LINC00527Q9UJ94 153 aa13.7□□□□□ -0.22
SCARB1-203ENST00000415380 KLRB1Q12918 225 aa13.7□□□□□ -0.22
SCARB1-203ENST00000415380 C9orf139Q6ZV77 190 aa13.7□□□□□ -0.22
SCARB1-203ENST00000415380 CACNA1BQ00975 2339 aa13.7□□□□□ -0.22
SCARB1-203ENST00000415380 PTPRZ1P23471 2315 aaPredicted RBP13.69□□□□□ -0.22
SCARB1-203ENST00000415380 LENEPQ9Y5L5 61 aa13.69□□□□□ -0.22
SCARB1-203ENST00000415380 TRAV12-1A0A0B4J245 112 aa13.69□□□□□ -0.22
SCARB1-203ENST00000415380 H7C1H1 209 aa13.69□□□□□ -0.22
SCARB1-203ENST00000415380 M0R381 172 aa13.69□□□□□ -0.22
SCARB1-203ENST00000415380 LMO4P61968 165 aa13.69□□□□□ -0.22
SCARB1-203ENST00000415380 TAL2Q16559 108 aa13.69□□□□□ -0.22
SCARB1-203ENST00000415380 KLK15Q9H2R5 256 aa13.69□□□□□ -0.22
SCARB1-203ENST00000415380 TRAV41A0A0B4J266 112 aa13.68□□□□□ -0.22
SCARB1-203ENST00000415380 E9PLD3 99 aa13.68□□□□□ -0.22
SCARB1-203ENST00000415380 F8VRH5 84 aa13.68□□□□□ -0.22
SCARB1-203ENST00000415380 RASL10AQ92737 203 aa13.68□□□□□ -0.22
SCARB1-203ENST00000415380 UBTD1Q9HAC8 227 aa13.68□□□□□ -0.22
SCARB1-203ENST00000415380 IGLL5B9A064 214 aa13.68□□□□□ -0.22
SCARB1-203ENST00000415380 GPHB5Q86YW7 130 aa13.68□□□□□ -0.22
SCARB1-203ENST00000415380 ZFAND2AQ8N6M9 145 aa13.68□□□□□ -0.22
SCARB1-203ENST00000415380 BPESC1Q9GZL8 116 aa13.68□□□□□ -0.22
SCARB1-203ENST00000415380 NBASA2RRP1 2371 aa13.67□□□□□ -0.22
SCARB1-203ENST00000415380 RPL24P83731 157 aaKnown RBP13.67□□□□□ -0.22
SCARB1-203ENST00000415380 ARL3P36405 182 aa13.67□□□□□ -0.22
SCARB1-203ENST00000415380 DEFB1P60022 68 aa13.67□□□□□ -0.22
SCARB1-203ENST00000415380 SUMO2P61956 95 aaKnown RBP13.67□□□□□ -0.22
SCARB1-203ENST00000415380 ORMDL2Q53FV1 153 aa13.67□□□□□ -0.22
SCARB1-203ENST00000415380 C19orf54Q5BKX5 351 aa13.67□□□□□ -0.22
SCARB1-203ENST00000415380 UNQ9165/PRO28630Q6UXU0 137 aa13.67□□□□□ -0.22
SCARB1-203ENST00000415380 TOMM6Q96B49 74 aa13.67□□□□□ -0.22
SCARB1-203ENST00000415380 LINC00477Q96M19 166 aa13.67□□□□□ -0.22
SCARB1-203ENST00000415380 SCGB3A1Q96QR1 104 aa13.67□□□□□ -0.22
SCARB1-203ENST00000415380 FAM223BA6NKX1 122 aa13.66□□□□□ -0.22
SCARB1-203ENST00000415380 C12orf74Q32Q52 190 aa13.66□□□□□ -0.22
SCARB1-203ENST00000415380 FAM223AQ8IWN6 122 aa13.66□□□□□ -0.22
SCARB1-203ENST00000415380 RPL39LQ96EH5 51 aaKnown RBP13.66□□□□□ -0.22
SCARB1-203ENST00000415380 HIST1H4GQ99525 98 aa13.66□□□□□ -0.22
SCARB1-203ENST00000415380 CHTOPQ9Y3Y2 248 aaKnown RBP13.66□□□□□ -0.22
SCARB1-203ENST00000415380 TEX48A0A1B0GUV7 120 aa13.66□□□□□ -0.22
SCARB1-203ENST00000415380 C14orf178Q8N769 122 aaPredicted RBP13.66□□□□□ -0.22
SCARB1-203ENST00000415380 TRBV12-3P01733 135 aa13.65□□□□□ -0.22
SCARB1-203ENST00000415380 ATP6V0BQ99437 205 aa13.65□□□□□ -0.22
SCARB1-203ENST00000415380 MOB4Q9Y3A3 225 aa13.65□□□□□ -0.22
SCARB1-203ENST00000415380 TRAV21A0A0B4J279 112 aa13.65□□□□□ -0.22
SCARB1-203ENST00000415380 S100A4P26447 101 aaKnown RBP13.65□□□□□ -0.22
SCARB1-203ENST00000415380 NEXN-AS1Q8NBZ9 246 aa13.65□□□□□ -0.22
SCARB1-203ENST00000415380 OR10J6PQ8NGY7 276 aa13.65□□□□□ -0.22
SCARB1-203ENST00000415380 C20orf78Q9BR46 151 aa13.65□□□□□ -0.22
SCARB1-203ENST00000415380 DPH3P1Q9H4G8 78 aa13.65□□□□□ -0.22
SCARB1-203ENST00000415380 IGHV3OR16-10A0A075B7F0 116 aa13.64□□□□□ -0.23
SCARB1-203ENST00000415380 SLC25A16P16260 332 aa13.64□□□□□ -0.23
SCARB1-203ENST00000415380 FOXI2Q6ZQN5 318 aa13.64□□□□□ -0.23
SCARB1-203ENST00000415380 ZNF479Q96JC4 524 aa13.64□□□□□ -0.23
SCARB1-203ENST00000415380 TRBV7-3A0A075B6L6 115 aa13.64□□□□□ -0.23
SCARB1-203ENST00000415380 SOCS3O14543 225 aa13.64□□□□□ -0.23
SCARB1-203ENST00000415380 ASIPP42127 132 aa13.64□□□□□ -0.23
SCARB1-203ENST00000415380 RAXQ9Y2V3 346 aa13.64□□□□□ -0.23
SCARB1-203ENST00000415380 RNF223E7ERA6 249 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 OVOL1O14753 267 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 ANXA2RQ3ZCQ2 193 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 PHLDA3Q9Y5J5 127 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 ZFHX3Q15911 3703 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 MYMXA0A1B0GTQ4 84 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 OR11H12B2RN74 326 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 OR11H1Q8NG94 326 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 OR11H2Q8NH07 326 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 MGPP08493 103 aa13.63□□□□□ -0.23
SCARB1-203ENST00000415380 RNASE4P34096 147 aaKnown RBP13.62□□□□□ -0.23
SCARB1-203ENST00000415380 C2orf66Q6UXQ4 117 aa13.62□□□□□ -0.23
SCARB1-203ENST00000415380 BAALCQ8WXS3 180 aa13.62□□□□□ -0.23
SCARB1-203ENST00000415380 NDUFA4O00483 81 aa13.61□□□□□ -0.23
SCARB1-203ENST00000415380 CRIP2P52943 208 aaPredicted RBP13.61□□□□□ -0.23
SCARB1-203ENST00000415380 SPOCK3Q9BQ16 436 aa13.61□□□□□ -0.23
SCARB1-203ENST00000415380 TMEM238C9JI98 176 aa13.61□□□□□ -0.23
SCARB1-203ENST00000415380 F6UB75 175 aa13.61□□□□□ -0.23
SCARB1-203ENST00000415380 LINC01619G3V211 115 aa13.61□□□□□ -0.23
SCARB1-203ENST00000415380 GNRH2O43555 120 aa13.61□□□□□ -0.23
SCARB1-203ENST00000415380 WFDC2Q14508 124 aa13.61□□□□□ -0.23
SCARB1-203ENST00000415380 FAM19A4Q96LR4 140 aa13.61□□□□□ -0.23
SCARB1-203ENST00000415380 F8W1H4 67 aa13.6□□□□□ -0.23
SCARB1-203ENST00000415380 ATRXP46100 2492 aa13.6□□□□□ -0.23
SCARB1-203ENST00000415380 AGRNO00468 2067 aa13.6□□□□□ -0.23
SCARB1-203ENST00000415380 H3BMG7 143 aa13.6□□□□□ -0.23
SCARB1-203ENST00000415380 LGALS1P09382 135 aaKnown RBP13.59□□□□□ -0.23
SCARB1-203ENST00000415380 MED14OSP0DP75 135 aa13.59□□□□□ -0.23
SCARB1-203ENST00000415380 RPL11P62913 178 aaKnown RBP13.59□□□□□ -0.23
SCARB1-203ENST00000415380 RRN3P1Q2M238 152 aa13.59□□□□□ -0.23
SCARB1-203ENST00000415380 A0A1B0GWB2 263 aa13.59□□□□□ -0.23
SCARB1-203ENST00000415380 RNASE3P12724 160 aaKnown RBP13.59□□□□□ -0.23
SCARB1-203ENST00000415380 UCNP55089 124 aa13.59□□□□□ -0.23
SCARB1-203ENST00000415380 BRD3OSQ6XYD6 125 aa13.59□□□□□ -0.23
SCARB1-203ENST00000415380 CYSLTR1Q9Y271 337 aa13.59□□□□□ -0.23
SCARB1-203ENST00000415380 PRSS29PA6NIE9 313 aa13.58□□□□□ -0.24
SCARB1-203ENST00000415380 AMTNQ6UX39 209 aa13.58□□□□□ -0.24
SCARB1-203ENST00000415380 SPANXB1Q9NS25 103 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms