RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 UBE2E2Q96LR5 201 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 OR4C12Q96R67 309 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 RASL11BQ9BPW5 248 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 IL36BQ9NZH7 164 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 GNG13Q9P2W3 67 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 TIMM9Q9Y5J7 89 aa3.5□□□□□ -1.85
SF3B1-202ENST00000409915 COL6A5A8TX70 2615 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 TRGV10A0A0A0MS01 117 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 A0A1B0GWB2 263 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 GRIFINA4D1Z8 144 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 NCBP2LA6PVI3 153 aaKnown RBP3.49□□□□□ -1.85
SF3B1-202ENST00000409915 CEBPZOSA8MTT3 80 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 E9PLD3 99 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 H3BMG7 143 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 H3BUT2 72 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 M0R1W7 72 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 NPFFO15130 113 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 IGHV3-7P01780 117 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 MT-ATP8P03928 68 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 CRYGDP07320 174 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 OR5AL1P0C617 328 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 FGF6P10767 208 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 NDUFV3P56181 108 aaKnown RBP3.49□□□□□ -1.85
SF3B1-202ENST00000409915 NSUN5P1Q3KNT7 163 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 FAM53AQ6NSI3 398 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-202ENST00000409915 EBLN2Q6P2I7 272 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 TEX29Q8N6K0 151 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 TMEM252Q8N6L7 170 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-202ENST00000409915 OR4X2Q8NGF9 303 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 OR13C6PQ8NH95 151 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 MPLKIPQ8TAP9 179 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 PIFOQ8TCI5 191 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF714Q96N38 554 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 TMEM70Q9BUB7 260 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 KRTAP3-1Q9BYR8 98 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 MAP1LC3AQ9H492 121 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 ZNRD1Q9P1U0 126 aa3.49□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF256Q9Y2P7 627 aaPredicted RBP3.49□□□□□ -1.85
SF3B1-202ENST00000409915 LSM5Q9Y4Y9 91 aaKnown RBP3.49□□□□□ -1.85
SF3B1-202ENST00000409915 IGHV3-43A0A0B4J1X8 118 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 IGLV5-39A0A0G2JS06 123 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 OR4C46A6NHA9 309 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 C17orf98A8MV24 154 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 TMEM14DPA8MWL7 114 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 TMEM262E9PQX1 116 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 F2Z2F3 143 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 FNDC10F2Z333 226 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 M0R2Z0 102 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 ISLRO14498 428 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 HMGB3O15347 200 aaKnown RBP3.48□□□□□ -1.85
SF3B1-202ENST00000409915 PDCD6O75340 191 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 HLA-DQA1P01909 254 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 IGHV1-8P0DP01 117 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 IGHV3-43DP0DP04 118 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 BLVRBP30043 206 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-202ENST00000409915 PSMB3P49720 205 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 RPL18AQ02543 176 aaKnown RBP3.48□□□□□ -1.85
SF3B1-202ENST00000409915 CATR1Q13166 79 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 C4orf26Q17RF5 130 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 C17orf58Q2M2W7 97 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 C10orf25Q5T742 122 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 Q6ZPA2 131 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 TMEM136Q6ZRR5 245 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 C6orf201Q7Z4U5 140 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 BPIFA4PQ86YQ2 179 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 DYNAPQ8N1N2 210 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF645Q8N7E2 425 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF491Q8N8L2 437 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 LEAP2Q969E1 77 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 HDHD3Q9BSH5 251 aaPredicted RBP3.48□□□□□ -1.85
SF3B1-202ENST00000409915 TMEM191AQ9H0A3 160 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF286AQ9HBT8 521 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 CALYQ9NYX4 217 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 HIGD1BQ9P298 99 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 STAB1Q9NY15 2570 aa3.48□□□□□ -1.85
SF3B1-202ENST00000409915 IGKV1D-8A0A087WSZ0 117 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 PIGBOS1A0A0B4J2F0 54 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 CTXND1A0A1B0GTU2 59 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 A0A1B0GV50 99 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 FAM240AA0A1B0GVK7 77 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 TMEM30CPA0ZSE6 113 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 ZFP92A6NM28 416 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 FOXI3A8MTJ6 420 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-202ENST00000409915 ODF3BA8MYP8 253 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 C12orf77C9JDV5 145 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 CCDC179H3BU77 68 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 J3KT08 172 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 CXorf1O96002 111 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 APCSP02743 223 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 CBLN1P23435 193 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 ASIPP42127 132 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 VDAC2P45880 294 aaPredicted RBP3.47□□□□□ -1.85
SF3B1-202ENST00000409915 ATP5G2Q06055 141 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 WFDC2Q14508 124 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 LY6EQ16553 131 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 KRTAP21-3Q3LHN1 58 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 LINC01545Q5VT33 79 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 LCN12Q6JVE5 192 aa3.47□□□□□ -1.85
SF3B1-202ENST00000409915 ZNF497Q6ZNH5 498 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms