RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 H3BVH4 76 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 OR5AL1P0C617 328 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 KIR3DS1Q14943 382 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 FA2HQ7L5A8 372 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 APRG1Q8IVJ8 170 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 KLHL30-AS1Q8NEE0 82 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 DUX3Q96PT4 197 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 TIMM8BQ9Y5J9 83 aaPredicted RBP15.53■□□□□ 0.08
USP39-203ENST00000409470 SMKR1H3BMG3 65 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 DDTP30046 118 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 SPANXN1Q5VSR9 72 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 Q8N976 141 aa15.53■□□□□ 0.08
USP39-203ENST00000409470 LOC389332A0A1B0GUA5 103 aa15.52■□□□□ 0.08
USP39-203ENST00000409470 RAB4AP20338 218 aa15.52■□□□□ 0.08
USP39-203ENST00000409470 EBLN2Q6P2I7 272 aa15.52■□□□□ 0.08
USP39-203ENST00000409470 SMIM15Q7Z3B0 74 aa15.52■□□□□ 0.08
USP39-203ENST00000409470 AP5S1Q9NUS5 200 aa15.52■□□□□ 0.08
USP39-203ENST00000409470 SNAI2O43623 268 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 NCR2O95944 276 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 S100A4P26447 101 aaKnown RBP15.51■□□□□ 0.07
USP39-203ENST00000409470 CACNG7P62955 275 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 ANXA2RQ3ZCQ2 193 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 RNF185Q96GF1 192 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 PEMTQ9UBM1 199 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 ACANP16112 2415 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 LEPROTL1O95214 131 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 BTF3P20290 206 aaKnown RBP15.51■□□□□ 0.07
USP39-203ENST00000409470 HIST2H2BDQ6DRA6 164 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 ADAMTSL5Q6ZMM2 481 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 WFDC12Q8WWY7 111 aa15.51■□□□□ 0.07
USP39-203ENST00000409470 IFI27P40305 119 aaPredicted RBP15.5■□□□□ 0.07
USP39-203ENST00000409470 ASIPP42127 132 aa15.5■□□□□ 0.07
USP39-203ENST00000409470 SCGB2A2Q13296 93 aa15.5■□□□□ 0.07
USP39-203ENST00000409470 TDRG1Q3Y452 100 aa15.5■□□□□ 0.07
USP39-203ENST00000409470 VAMP8Q9BV40 100 aa15.5■□□□□ 0.07
USP39-203ENST00000409470 KLLNB2CW77 178 aa15.5■□□□□ 0.07
USP39-203ENST00000409470 OR9G4Q8NGQ1 327 aa15.5■□□□□ 0.07
USP39-203ENST00000409470 SIGLEC8Q9NYZ4 499 aa15.5■□□□□ 0.07
USP39-203ENST00000409470 A0A0J9YX75 114 aa15.49■□□□□ 0.07
USP39-203ENST00000409470 NPYP01303 97 aa15.49■□□□□ 0.07
USP39-203ENST00000409470 PPBPP02775 128 aa15.49■□□□□ 0.07
USP39-203ENST00000409470 EVI2AP22794 236 aa15.49■□□□□ 0.07
USP39-203ENST00000409470 DEFA6Q01524 100 aa15.49■□□□□ 0.07
USP39-203ENST00000409470 GCN1Q92616 2671 aaKnown RBP15.49■□□□□ 0.07
USP39-203ENST00000409470 IGHV4-4A0A075B6R2 117 aa15.48■□□□□ 0.07
USP39-203ENST00000409470 IGKV3-20P01619 116 aa15.48■□□□□ 0.07
USP39-203ENST00000409470 PAM16Q9Y3D7 125 aa15.48■□□□□ 0.07
USP39-203ENST00000409470 LEPP41159 167 aa15.48■□□□□ 0.07
USP39-203ENST00000409470 C11orf44Q8N8P7 122 aa15.48■□□□□ 0.07
USP39-203ENST00000409470 DLX4Q92988 240 aaPredicted RBP15.48■□□□□ 0.07
USP39-203ENST00000409470 KIR2DL5BA0A0G2JN68 375 aa15.47■□□□□ 0.07
USP39-203ENST00000409470 KIR2DL5BA0A0G2JPC4 375 aa15.47■□□□□ 0.07
USP39-203ENST00000409470 KIR2DL5AQ8N109 375 aa15.47■□□□□ 0.07
USP39-203ENST00000409470 TMEM70Q9BUB7 260 aa15.47■□□□□ 0.07
USP39-203ENST00000409470 RNASE1P07998 156 aaKnown RBP15.46■□□□□ 0.07
USP39-203ENST00000409470 LINC00173Q6ZV60 143 aa15.46■□□□□ 0.07
USP39-203ENST00000409470 ODF3Q96PU9 254 aa15.46■□□□□ 0.07
USP39-203ENST00000409470 AKAP9Q99996 3911 aa15.46■□□□□ 0.07
USP39-203ENST00000409470 FASNP49327 2511 aaKnown RBP15.46■□□□□ 0.07
USP39-203ENST00000409470 GNRH2O43555 120 aa15.46■□□□□ 0.07
USP39-203ENST00000409470 TCF21O43680 179 aa15.46■□□□□ 0.07
USP39-203ENST00000409470 PHLDA3Q9Y5J5 127 aa15.46■□□□□ 0.07
USP39-203ENST00000409470 TRAV12-3A0A0B4J271 114 aa15.45■□□□□ 0.06
USP39-203ENST00000409470 M0R381 172 aa15.45■□□□□ 0.06
USP39-203ENST00000409470 FAM159AQ6UWV7 190 aa15.45■□□□□ 0.06
USP39-203ENST00000409470 HSPB8Q9UJY1 196 aa15.45■□□□□ 0.06
USP39-203ENST00000409470 C7orf71A4D174 169 aa15.44■□□□□ 0.06
USP39-203ENST00000409470 DUSP14O95147 198 aaKnown RBP15.44■□□□□ 0.06
USP39-203ENST00000409470 DYNLRB2Q8TF09 96 aa15.44■□□□□ 0.06
USP39-203ENST00000409470 ZNF418Q8TF45 676 aaPredicted RBP15.44■□□□□ 0.06
USP39-203ENST00000409470 MAP1LC3AQ9H492 121 aa15.44■□□□□ 0.06
USP39-203ENST00000409470 LAMTOR2Q9Y2Q5 125 aa15.44■□□□□ 0.06
USP39-203ENST00000409470 A0A1W2PRX2 142 aa15.44■□□□□ 0.06
USP39-203ENST00000409470 SPRY2O43597 315 aa15.44■□□□□ 0.06
USP39-203ENST00000409470 GAS8-AS1O95177 125 aa15.44■□□□□ 0.06
USP39-203ENST00000409470 MED14OSP0DP75 135 aa15.44■□□□□ 0.06
USP39-203ENST00000409470 FOXI2Q6ZQN5 318 aa15.44■□□□□ 0.06
USP39-203ENST00000409470 TNFRSF6BO95407 300 aa15.43■□□□□ 0.06
USP39-203ENST00000409470 CD28P10747 220 aa15.43■□□□□ 0.06
USP39-203ENST00000409470 SMR3AQ99954 134 aa15.43■□□□□ 0.06
USP39-203ENST00000409470 MAP1LC3CQ9BXW4 147 aa15.43■□□□□ 0.06
USP39-203ENST00000409470 SYS1-DBNDD2H3BUS1 97 aa15.43■□□□□ 0.06
USP39-203ENST00000409470 ATOH7Q8N100 152 aa15.43■□□□□ 0.06
USP39-203ENST00000409470 GATA1P15976 413 aaPredicted RBP15.42■□□□□ 0.06
USP39-203ENST00000409470 TSPOP30536 169 aa15.42■□□□□ 0.06
USP39-203ENST00000409470 RAX2Q96IS3 184 aa15.42■□□□□ 0.06
USP39-203ENST00000409470 C20orf144Q9BQM9 153 aa15.42■□□□□ 0.06
USP39-203ENST00000409470 SCRT2Q9NQ03 307 aa15.42■□□□□ 0.06
USP39-203ENST00000409470 TRAV12-2A0A075B6T6 113 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 RNASE3P12724 160 aaKnown RBP15.41■□□□□ 0.06
USP39-203ENST00000409470 TMEM61Q8N0U2 210 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 LINC01006Q8NI28 216 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 C14orf144Q96I85 54 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 TMEM160Q9NX00 188 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 HECTD1Q9ULT8 2610 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 ANK3Q12955 4377 aaKnown RBP15.41■□□□□ 0.06
USP39-203ENST00000409470 CDKN1BP46527 198 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 SPINK13Q1W4C9 94 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 SPATA12Q7Z6I5 190 aa15.41■□□□□ 0.06
USP39-203ENST00000409470 NDUFAF3Q9BU61 184 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms