RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 SAR1AQ9NR31 198 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 TAS2R8Q9NYW2 309 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 MYLKQ15746 1914 aa1.17□□□□□ -2.22
HMGB1P17-201ENST00000403495 PTPRGP23470 1445 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 FAM25AB3EWG3 89 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 FAM25CB3EWG5 89 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 FAM25GB3EWG6 89 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 GNG7O60262 68 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 IGLV3-1P01715 115 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 IGKCP01834 107 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 GUCA1AP43080 201 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 POLR2JP52435 117 aaKnown RBP1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 EMX2Q04743 252 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 RHOHQ15669 191 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 UNQ5815/PRO19632Q6UWF5 114 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 SLC25A26Q70HW3 274 aa1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 BOKQ9UMX3 212 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 IBTKQ9P2D0 1353 aaPredicted RBP1.16□□□□□ -2.22
HMGB1P17-201ENST00000403495 MYOM3Q5VTT5 1437 aa1.15□□□□□ -2.22
HMGB1P17-201ENST00000403495 TRAV17A0A0B4J275 112 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 A0A0G2JMM0 328 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 TMEM30CPA0ZSE6 113 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 IGF2P01344 180 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 PYYP10082 97 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 PRB4P10163 310 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 PDE6GP18545 87 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 IQCJQ1A5X6 159 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 OCIAD2Q56VL3 154 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 MIC13Q5XKP0 118 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 Q6ZUT4 128 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 DYNLRB2Q8TF09 96 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 ODF3Q96PU9 254 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 SDF2Q99470 211 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 PSMG3Q9BT73 122 aaPredicted RBP1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 CRCT1Q9UGL9 99 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 GRIN2AQ12879 1464 aa1.15□□□□□ -2.23
HMGB1P17-201ENST00000403495 EML6Q6ZMW3 1958 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 TRAV2A0A0B4J234 112 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 IGHV3-30P01768 117 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 GYPBP06028 91 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 IGHV3-30-5P0DP03 117 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 SCIMPQ6UWF3 145 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 LYPD5Q6UWN5 251 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 PPDPFLQ8WWR9 84 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 CCDC167Q9P0B6 97 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 COL6A6A6NMZ7 2263 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 ALPK2Q86TB3 2170 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 NCOA3Q9Y6Q9 1424 aa1.14□□□□□ -2.23
HMGB1P17-201ENST00000403495 TMEM2Q9UHN6 1383 aa1.13□□□□□ -2.23
HMGB1P17-201ENST00000403495 A0A1B0GV90 55 aa1.13□□□□□ -2.23
HMGB1P17-201ENST00000403495 FAM92AA1XBS5 289 aa1.13□□□□□ -2.23
HMGB1P17-201ENST00000403495 NUPR2A6NF83 97 aa1.13□□□□□ -2.23
HMGB1P17-201ENST00000403495 RPL37AP61513 92 aaKnown RBP1.13□□□□□ -2.23
HMGB1P17-201ENST00000403495 KCNRGQ8N5I3 272 aa1.13□□□□□ -2.23
HMGB1P17-201ENST00000403495 VSTM2AQ8TAG5 236 aa1.13□□□□□ -2.23
HMGB1P17-201ENST00000403495 DMAC1Q96GE9 116 aa1.13□□□□□ -2.23
HMGB1P17-201ENST00000403495 MRPL36Q9P0J6 103 aaKnown RBP1.13□□□□□ -2.23
HMGB1P17-201ENST00000403495 ROCK2O75116 1388 aaKnown RBP1.12□□□□□ -2.23
HMGB1P17-201ENST00000403495 POLEQ07864 2286 aa1.12□□□□□ -2.23
HMGB1P17-201ENST00000403495 DLEU1O43261 78 aa1.12□□□□□ -2.23
HMGB1P17-201ENST00000403495 PITX3O75364 302 aa1.12□□□□□ -2.23
HMGB1P17-201ENST00000403495 LINC01545Q5VT33 79 aa1.12□□□□□ -2.23
HMGB1P17-201ENST00000403495 ATG5Q9H1Y0 275 aa1.12□□□□□ -2.23
HMGB1P17-201ENST00000403495 C22orf24Q9Y442 160 aa1.12□□□□□ -2.23
HMGB1P17-201ENST00000403495 KMT2BQ9UMN6 2715 aaPredicted RBP1.12□□□□□ -2.23
HMGB1P17-201ENST00000403495 PEG3Q9GZU2 1588 aa1.12□□□□□ -2.23
HMGB1P17-201ENST00000403495 LRP5O75197 1615 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 NCR3O14931 201 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 FXYD4P59646 89 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 SPCS2Q15005 226 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 SBSPONQ8IVN8 264 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 DPH3Q96FX2 82 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 AMELYQ99218 206 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 PDCD10Q9BUL8 212 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 ADGRB1O14514 1584 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 KIDINS220Q9ULH0 1771 aa1.11□□□□□ -2.23
HMGB1P17-201ENST00000403495 KIAA1549LQ6ZVL6 1849 aa1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 TNRC6BQ9UPQ9 1833 aaKnown RBP1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 NAIPQ13075 1403 aa1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 TRAV12-2A0A075B6T6 113 aa1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 TRBV10-1A0A0K0K1A3 114 aa1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 HIGD1CA8MV81 97 aa1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 CCDC179H3BU77 68 aa1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 SLC25A6P12236 298 aa1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 MRPL35Q9NZE8 188 aaKnown RBP1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 PHRF1Q9P1Y6 1649 aaKnown RBP1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 WDR7Q9Y4E6 1490 aa1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 MYH10P35580 1976 aa1.1□□□□□ -2.23
HMGB1P17-201ENST00000403495 TECTAO75443 2155 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 CXorf51AA0A1B0GTR3 108 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 LINC00587B1AMM8 73 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 TFF1P04155 84 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 APODP05090 189 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 IL5P05113 134 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 PIRTP0C851 137 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 EFNA4P52798 201 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 MEIG1Q5JSS6 88 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 SPANXN1Q5VSR9 72 aa1.09□□□□□ -2.23
HMGB1P17-201ENST00000403495 OR2T2Q6IF00 324 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms