RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 A8MTW9 85 aa12.67□□□□□ -0.38
SMIM11A-202ENST00000399295 ZNF705GA8MUZ8 300 aaPredicted RBP12.67□□□□□ -0.38
SMIM11A-202ENST00000399295 P01737 135 aa12.67□□□□□ -0.38
SMIM11A-202ENST00000399295 CT83Q5H943 113 aa12.67□□□□□ -0.38
SMIM11A-202ENST00000399295 FAM162BQ5T6X4 162 aa12.67□□□□□ -0.38
SMIM11A-202ENST00000399295 IL36BQ9NZH7 164 aa12.67□□□□□ -0.38
SMIM11A-202ENST00000399295 V9GYV3 84 aa12.67□□□□□ -0.38
SMIM11A-202ENST00000399295 PRB4P10163 310 aaPredicted RBP12.66□□□□□ -0.38
SMIM11A-202ENST00000399295 AMTNQ6UX39 209 aa12.66□□□□□ -0.38
SMIM11A-202ENST00000399295 C8orf49Q96NF6 230 aa12.66□□□□□ -0.38
SMIM11A-202ENST00000399295 RPP21Q9H633 154 aaKnown RBP12.66□□□□□ -0.38
SMIM11A-202ENST00000399295 X6R8D5 127 aa12.66□□□□□ -0.38
SMIM11A-202ENST00000399295 TRAV9-1A0A075B6T8 112 aa12.65□□□□□ -0.38
SMIM11A-202ENST00000399295 FABP5P3A8MUU1 101 aa12.65□□□□□ -0.38
SMIM11A-202ENST00000399295 DEFB4AO15263 64 aa12.65□□□□□ -0.38
SMIM11A-202ENST00000399295 MIFP14174 115 aa12.65□□□□□ -0.38
SMIM11A-202ENST00000399295 Q8NAQ8 132 aa12.65□□□□□ -0.38
SMIM11A-202ENST00000399295 FAM19A4Q96LR4 140 aa12.65□□□□□ -0.38
SMIM11A-202ENST00000399295 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.38
SMIM11A-202ENST00000399295 IGHV4-28A0A0C4DH34 117 aa12.64□□□□□ -0.39
SMIM11A-202ENST00000399295 A8MWL6 223 aa12.64□□□□□ -0.39
SMIM11A-202ENST00000399295 PFN1P07737 140 aaKnown RBP12.64□□□□□ -0.39
SMIM11A-202ENST00000399295 CRISP2P16562 243 aa12.64□□□□□ -0.39
SMIM11A-202ENST00000399295 LEPP41159 167 aa12.64□□□□□ -0.39
SMIM11A-202ENST00000399295 RPL19P84098 196 aaKnown RBP12.64□□□□□ -0.39
SMIM11A-202ENST00000399295 ELOBQ15370 118 aa12.64□□□□□ -0.39
SMIM11A-202ENST00000399295 YPEL4Q96NS1 127 aa12.64□□□□□ -0.39
SMIM11A-202ENST00000399295 TRBV24-1A0A075B6N3 115 aa12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 IGHV3OR16-12A0A075B7B8 117 aa12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 FAM231BA6NCW3 169 aa12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 SH2D1AO60880 128 aa12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 AMBPP02760 352 aa12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 TSPOP30536 169 aa12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 CRIP1P50238 77 aa12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 SPINK13Q1W4C9 94 aa12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 ZNF705AQ6ZN79 300 aaPredicted RBP12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 URGCP-MRPS24S4R325 110 aa12.63□□□□□ -0.39
SMIM11A-202ENST00000399295 SMIM27A0A1W2PRY6 76 aa12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 XKRY2A2RUG3 117 aa12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 COLCA2A8K830 154 aa12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 M0R2Z0 102 aa12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 RBMY1A1P0DJD3 496 aaKnown RBP12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 RBMY1CP0DJD4 496 aa12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 RPS20P60866 119 aaKnown RBP12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 RBMY1FQ15415 496 aaKnown RBP12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 TSKUQ8WUA8 353 aa12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 GFRA4Q9GZZ7 299 aa12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 GOLT1BQ9Y3E0 138 aa12.62□□□□□ -0.39
SMIM11A-202ENST00000399295 GPX1P07203 203 aa12.61□□□□□ -0.39
SMIM11A-202ENST00000399295 C1orf158Q8N1D5 194 aa12.61□□□□□ -0.39
SMIM11A-202ENST00000399295 ZFAND2AQ8N6M9 145 aa12.61□□□□□ -0.39
SMIM11A-202ENST00000399295 OR2D3Q8NGH3 330 aa12.61□□□□□ -0.39
SMIM11A-202ENST00000399295 C11orf45Q8TAV5 145 aa12.61□□□□□ -0.39
SMIM11A-202ENST00000399295 NEU1Q99519 415 aa12.61□□□□□ -0.39
SMIM11A-202ENST00000399295 PYGO2Q9BRQ0 406 aa12.61□□□□□ -0.39
SMIM11A-202ENST00000399295 CSMD3Q7Z407 3707 aa12.61□□□□□ -0.39
SMIM11A-202ENST00000399295 TRAV21A0A0B4J279 112 aa12.6□□□□□ -0.39
SMIM11A-202ENST00000399295 TMEM189A5PLL7 270 aa12.6□□□□□ -0.39
SMIM11A-202ENST00000399295 ZNF80P51504 273 aaPredicted RBP12.6□□□□□ -0.39
SMIM11A-202ENST00000399295 NAT8BQ9UHF3 227 aa12.6□□□□□ -0.39
SMIM11A-202ENST00000399295 SMIM9A6NGZ8 99 aa12.59□□□□□ -0.39
SMIM11A-202ENST00000399295 KLLNB2CW77 178 aa12.59□□□□□ -0.39
SMIM11A-202ENST00000399295 CRXO43186 299 aaPredicted RBP12.59□□□□□ -0.39
SMIM11A-202ENST00000399295 INSP01308 110 aa12.59□□□□□ -0.39
SMIM11A-202ENST00000399295 Q6AWC8 147 aa12.59□□□□□ -0.39
SMIM11A-202ENST00000399295 TMEM208Q9BTX3 173 aa12.59□□□□□ -0.39
SMIM11A-202ENST00000399295 STARD9Q9P2P6 4700 aa12.59□□□□□ -0.39
SMIM11A-202ENST00000399295 KMT2CQ8NEZ4 4911 aaKnown RBP12.58□□□□□ -0.4
SMIM11A-202ENST00000399295 TRAV12-2A0A075B6T6 113 aa12.58□□□□□ -0.4
SMIM11A-202ENST00000399295 A0A1W2PPQ1 181 aa12.58□□□□□ -0.4
SMIM11A-202ENST00000399295 CDKN1BP46527 198 aa12.58□□□□□ -0.4
SMIM11A-202ENST00000399295 FAM3BP58499 235 aaPredicted RBP12.58□□□□□ -0.4
SMIM11A-202ENST00000399295 NANOS2P60321 138 aaKnown RBP12.58□□□□□ -0.4
SMIM11A-202ENST00000399295 LINC01559Q495D7 138 aa12.58□□□□□ -0.4
SMIM11A-202ENST00000399295 FAM210BQ96KR6 192 aa12.58□□□□□ -0.4
SMIM11A-202ENST00000399295 TGIF2-C20orf24A0A0A6YYL0 155 aa12.57□□□□□ -0.4
SMIM11A-202ENST00000399295 NUPR2A6NF83 97 aa12.57□□□□□ -0.4
SMIM11A-202ENST00000399295 ORM1P02763 201 aa12.57□□□□□ -0.4
SMIM11A-202ENST00000399295 TYMSP04818 313 aa12.57□□□□□ -0.4
SMIM11A-202ENST00000399295 RAB5AP20339 215 aa12.57□□□□□ -0.4
SMIM11A-202ENST00000399295 C7orf71A4D174 169 aa12.56□□□□□ -0.4
SMIM11A-202ENST00000399295 CXCL1P09341 107 aa12.56□□□□□ -0.4
SMIM11A-202ENST00000399295 RNASE4P34096 147 aaKnown RBP12.56□□□□□ -0.4
SMIM11A-202ENST00000399295 FOXA3P55318 350 aaPredicted RBP12.56□□□□□ -0.4
SMIM11A-202ENST00000399295 COX19Q49B96 90 aa12.56□□□□□ -0.4
SMIM11A-202ENST00000399295 HIGD1CA8MV81 97 aa12.55□□□□□ -0.4
SMIM11A-202ENST00000399295 EMP1P54849 157 aa12.55□□□□□ -0.4
SMIM11A-202ENST00000399295 RRN3P1Q2M238 152 aa12.55□□□□□ -0.4
SMIM11A-202ENST00000399295 PRR9Q5T870 116 aa12.55□□□□□ -0.4
SMIM11A-202ENST00000399295 CEMP1Q6PRD7 247 aaPredicted RBP12.55□□□□□ -0.4
SMIM11A-202ENST00000399295 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
SMIM11A-202ENST00000399295 TENM2Q9NT68 2774 aa12.55□□□□□ -0.4
SMIM11A-202ENST00000399295 TCL1AP56279 114 aa12.54□□□□□ -0.4
SMIM11A-202ENST00000399295 RASL11AQ6T310 242 aa12.54□□□□□ -0.4
SMIM11A-202ENST00000399295 ATP5L2Q7Z4Y8 100 aa12.54□□□□□ -0.4
SMIM11A-202ENST00000399295 NUP35Q8NFH5 326 aa12.54□□□□□ -0.4
SMIM11A-202ENST00000399295 LINC01587Q99440 93 aa12.54□□□□□ -0.4
SMIM11A-202ENST00000399295 KLK5Q9Y337 293 aaPredicted RBP12.54□□□□□ -0.4
SMIM11A-202ENST00000399295 DYNC2H1Q8NCM8 4307 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms