RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CACNA1AO00555 2505 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 IQGAP2Q13576 1575 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 SAMD9Q5K651 1589 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 PAPPAQ13219 1627 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 CICQ96RK0 1608 aaPredicted RBP0.57□□□□□ -2.32
CD47-203ENST00000398258 ZNF609O15014 1411 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 SMG6Q86US8 1419 aaKnown RBP0.57□□□□□ -2.32
CD47-203ENST00000398258 MROH2AA6NES4 1674 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 WIZO95785 1651 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 IQGAP1P46940 1657 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 AHNAKQ09666 5890 aaKnown RBP0.57□□□□□ -2.32
CD47-203ENST00000398258 ADGRL2O95490 1459 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 ATP7BP35670 1465 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 TRBV7-6A0A0J9YX20 115 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 ARL5CA6NH57 179 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 J3KT08 172 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 CD14P08571 375 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 RPL22P35268 128 aaKnown RBP0.57□□□□□ -2.32
CD47-203ENST00000398258 RPS28P62857 69 aaKnown RBP0.57□□□□□ -2.32
CD47-203ENST00000398258 SPATA45Q537H7 98 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 OCIAD2Q56VL3 154 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 CASC2Q6XLA1 102 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 Q8N6K4 173 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 MORN4Q8NDC4 146 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 BATF3Q9NR55 127 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 COL24A1Q17RW2 1714 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
CD47-203ENST00000398258 ASCC3Q8N3C0 2202 aaKnown RBP0.57□□□□□ -2.32
CD47-203ENST00000398258 ANKRD30AQ9BXX3 1397 aa0.57□□□□□ -2.32
CD47-203ENST00000398258 TMEM131LA2VDJ0 1609 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 ABCA9Q8IUA7 1624 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 SNRNP200O75643 2136 aaKnown RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 EEA1Q15075 1411 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 ARHGAP31Q2M1Z3 1444 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 CUL7Q14999 1698 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 PPRC1Q5VV67 1664 aaKnown RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 ALPK3Q96L96 1907 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 POLR1AO95602 1720 aaPredicted RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 LRRIQ1Q96JM4 1722 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 TRPM2O94759 1503 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 EFCAB6Q5THR3 1501 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 KCPQ6ZWJ8 1503 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 LMTK2Q8IWU2 1503 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 A0A1B0GW64 132 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 LOC107986453A0A1B0GWG9 222 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 BBIP1A8MTZ0 92 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 DEGS1O15121 323 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 IGLV3-1P01715 115 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 IGHV3-33P01772 117 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 HBDP02042 147 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 SLC25A5P05141 298 aaKnown RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 SAA1P0DJI8 122 aaPredicted RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 SRP9P49458 86 aaKnown RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 OR8B8Q15620 311 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 TMEM244Q5VVB8 128 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 GLIPR1L1Q6UWM5 242 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 OR5A2Q8NGI9 324 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 OR51A4Q8NGJ6 313 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 PYDC1Q8WXC3 89 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 CIB3Q96Q77 187 aaPredicted RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 HSPB8Q9UJY1 196 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 SAMD9LQ8IVG5 1584 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 INO80Q9ULG1 1556 aaPredicted RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 NUP210LQ5VU65 1888 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 LRRC37A3O60309 1634 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 ABCA6Q8N139 1617 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 PKD1L2Q7Z442 2459 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 TMEM2Q9UHN6 1383 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 C3P01024 1663 aa0.56□□□□□ -2.32
CD47-203ENST00000398258 ZC3H13Q5T200 1668 aaKnown RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 TNRC6CQ9HCJ0 1690 aaKnown RBP0.56□□□□□ -2.32
CD47-203ENST00000398258 HFM1A2PYH4 1435 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 CASKIN1Q8WXD9 1431 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 SUPT6HQ7KZ85 1726 aaKnown RBP0.55□□□□□ -2.32
CD47-203ENST00000398258 HEATR1Q9H583 2144 aaKnown RBP0.55□□□□□ -2.32
CD47-203ENST00000398258 XIRP1Q702N8 1843 aaKnown RBP0.55□□□□□ -2.32
CD47-203ENST00000398258 MGAMO43451 1857 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 SSC5DA1L4H1 1573 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 TRAV36DV7A0A075B6V5 113 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 C9JAW5 83 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 CDC42EP2O14613 210 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 DPM2O94777 84 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 TNFSF15O95150 251 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 TCRAP04437 139 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 PAEPP09466 180 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 GTF2A1P52655 376 aaPredicted RBP0.55□□□□□ -2.32
CD47-203ENST00000398258 LSM3P62310 102 aaKnown RBP0.55□□□□□ -2.32
CD47-203ENST00000398258 QRFPP83859 136 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 SBSPONQ8IVN8 264 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 TCTE3Q8IZS6 198 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 OR8I2Q8N0Y5 310 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 OR10AC1Q8NH08 325 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 NAT14Q8WUY8 206 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 AP1S3Q96PC3 154 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 AIF1LQ9BQI0 150 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 C19orf12Q9NSK7 152 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 CALML5Q9NZT1 146 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 JPT1Q9UK76 154 aa0.55□□□□□ -2.32
CD47-203ENST00000398258 BOKQ9UMX3 212 aaPredicted RBP0.55□□□□□ -2.32
CD47-203ENST00000398258 HIGD1AQ9Y241 93 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms