RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 CSPG4Q6UVK1 2322 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 J3QR89 54 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 FGF6P10767 208 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 C19orf54Q5BKX5 351 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 DOPEY1Q5JWR5 2465 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 IGHV4-30-2A0A087WSY4 118 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 GAS8-AS1O95177 125 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 Q6ZQT7 251 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 OR8A1Q8NGG7 326 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 C11orf21Q9P2W6 132 aa14.05□□□□□ -0.16
CHRFAM7A-202ENST00000397827 RBAKDNA6NC62 111 aa14.04□□□□□ -0.16
CHRFAM7A-202ENST00000397827 LINC01545Q5VT33 79 aa14.04□□□□□ -0.16
CHRFAM7A-202ENST00000397827 MYO18BQ8IUG5 2567 aa14.04□□□□□ -0.16
CHRFAM7A-202ENST00000397827 IGKV3D-20A0A0C4DH25 116 aa14.04□□□□□ -0.16
CHRFAM7A-202ENST00000397827 ATP5J2P56134 94 aa14.04□□□□□ -0.16
CHRFAM7A-202ENST00000397827 UNQ9165/PRO28630Q6UXU0 137 aa14.04□□□□□ -0.16
CHRFAM7A-202ENST00000397827 U3KQE9 123 aa14.04□□□□□ -0.16
CHRFAM7A-202ENST00000397827 ARL3P36405 182 aa14.03□□□□□ -0.16
CHRFAM7A-202ENST00000397827 H3BUX3 64 aa14.03□□□□□ -0.16
CHRFAM7A-202ENST00000397827 LINC01559Q495D7 138 aa14.03□□□□□ -0.16
CHRFAM7A-202ENST00000397827 TMEM78Q5T7P6 136 aa14.03□□□□□ -0.16
CHRFAM7A-202ENST00000397827 A1L4Q6 167 aa14.02□□□□□ -0.16
CHRFAM7A-202ENST00000397827 IGHV3-11P01762 117 aa14.02□□□□□ -0.16
CHRFAM7A-202ENST00000397827 WFDC2Q14508 124 aa14.02□□□□□ -0.16
CHRFAM7A-202ENST00000397827 TM4SF20Q53R12 229 aa14.02□□□□□ -0.16
CHRFAM7A-202ENST00000397827 RNF185Q96GF1 192 aa14.02□□□□□ -0.16
CHRFAM7A-202ENST00000397827 FAM223BA6NKX1 122 aa14.02□□□□□ -0.17
CHRFAM7A-202ENST00000397827 SRSF2Q01130 221 aaKnown RBP14.02□□□□□ -0.17
CHRFAM7A-202ENST00000397827 FOXI2Q6ZQN5 318 aa14.02□□□□□ -0.17
CHRFAM7A-202ENST00000397827 Q6ZS46 218 aa14.02□□□□□ -0.17
CHRFAM7A-202ENST00000397827 FAM223AQ8IWN6 122 aa14.02□□□□□ -0.17
CHRFAM7A-202ENST00000397827 C16orf92Q96LL3 132 aa14.02□□□□□ -0.17
CHRFAM7A-202ENST00000397827 SPANXB1Q9NS25 103 aaPredicted RBP14.02□□□□□ -0.17
CHRFAM7A-202ENST00000397827 SS18L2Q9UHA2 77 aa14.02□□□□□ -0.17
CHRFAM7A-202ENST00000397827 ACACBO00763 2458 aa14.02□□□□□ -0.17
CHRFAM7A-202ENST00000397827 SMAD7O15105 426 aaKnown RBP14.01□□□□□ -0.17
CHRFAM7A-202ENST00000397827 BLCAPP62952 87 aa14.01□□□□□ -0.17
CHRFAM7A-202ENST00000397827 LCNL1Q6ZST4 164 aa14.01□□□□□ -0.17
CHRFAM7A-202ENST00000397827 SPAG8Q99932 426 aaPredicted RBP14.01□□□□□ -0.17
CHRFAM7A-202ENST00000397827 SHISA2Q6UWI4 295 aa14.01□□□□□ -0.17
CHRFAM7A-202ENST00000397827 CNFNQ9BYD5 112 aa14.01□□□□□ -0.17
CHRFAM7A-202ENST00000397827 KLK15Q9H2R5 256 aa14.01□□□□□ -0.17
CHRFAM7A-202ENST00000397827 GATA3P23771 443 aa14□□□□□ -0.17
CHRFAM7A-202ENST00000397827 SH2D6Q7Z4S9 175 aa14□□□□□ -0.17
CHRFAM7A-202ENST00000397827 CRIP2P52943 208 aaPredicted RBP14□□□□□ -0.17
CHRFAM7A-202ENST00000397827 GLMPQ8WWB7 406 aa14□□□□□ -0.17
CHRFAM7A-202ENST00000397827 NRGNQ92686 78 aa14□□□□□ -0.17
CHRFAM7A-202ENST00000397827 C20orf173Q96LM9 149 aa14□□□□□ -0.17
CHRFAM7A-202ENST00000397827 J3KRW8 73 aa13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 GATA1P15976 413 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 EVI2AP22794 236 aa13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 ZNF479Q96JC4 524 aa13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 IGF1P05019 195 aa13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 SMIM13P0DJ93 91 aa13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 DEFB1P60022 68 aa13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 WFDC3Q8IUB2 231 aa13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 BOD1L2Q8IYS8 172 aa13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 MRPL16Q9NX20 251 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-202ENST00000397827 TSPAN13O95857 204 aa13.98□□□□□ -0.17
CHRFAM7A-202ENST00000397827 ETDBQ3ZM63 59 aa13.98□□□□□ -0.17
CHRFAM7A-202ENST00000397827 HBDP02042 147 aa13.98□□□□□ -0.17
CHRFAM7A-202ENST00000397827 PF4V1P10720 104 aa13.98□□□□□ -0.17
CHRFAM7A-202ENST00000397827 C9orf47Q6ZRZ4 202 aa13.98□□□□□ -0.17
CHRFAM7A-202ENST00000397827 PGPEP1Q9NXJ5 209 aa13.98□□□□□ -0.17
CHRFAM7A-202ENST00000397827 USP9YO00507 2555 aaPredicted RBP13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 AVPP01185 164 aa13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 MSMBP08118 114 aa13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 MTURNQ8N3F0 131 aa13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 MRPL53Q96EL3 112 aaKnown RBP13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 CENPEQ02224 2701 aa13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 ZFYVE26Q68DK2 2539 aa13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 IGHG2P01859 326 aa13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 PRR9Q5T870 116 aa13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 GPHB5Q86YW7 130 aa13.97□□□□□ -0.17
CHRFAM7A-202ENST00000397827 IGKV3-7A0A075B6H7 116 aa13.96□□□□□ -0.17
CHRFAM7A-202ENST00000397827 A6NDX4 124 aa13.96□□□□□ -0.17
CHRFAM7A-202ENST00000397827 CACNG7P62955 275 aa13.96□□□□□ -0.17
CHRFAM7A-202ENST00000397827 C18orf15Q96N68 181 aa13.96□□□□□ -0.17
CHRFAM7A-202ENST00000397827 OR4X2Q8NGF9 303 aa13.96□□□□□ -0.17
CHRFAM7A-202ENST00000397827 OR9G4Q8NGQ1 327 aa13.96□□□□□ -0.17
CHRFAM7A-202ENST00000397827 HIF1ANQ9NWT6 349 aa13.96□□□□□ -0.17
CHRFAM7A-202ENST00000397827 POLQO75417 2590 aa13.96□□□□□ -0.18
CHRFAM7A-202ENST00000397827 IGHV7-4-1A0A0J9YVY3 117 aa13.95□□□□□ -0.18
CHRFAM7A-202ENST00000397827 TNFRSF6BO95407 300 aa13.95□□□□□ -0.18
CHRFAM7A-202ENST00000397827 RPL11P62913 178 aaKnown RBP13.95□□□□□ -0.18
CHRFAM7A-202ENST00000397827 MAP1LC3AQ9H492 121 aa13.95□□□□□ -0.18
CHRFAM7A-202ENST00000397827 K7ERJ3 54 aa13.95□□□□□ -0.18
CHRFAM7A-202ENST00000397827 INSL3P51460 131 aa13.95□□□□□ -0.18
CHRFAM7A-202ENST00000397827 ZANQ9Y493 2812 aa13.95□□□□□ -0.18
CHRFAM7A-202ENST00000397827 NDUFA4O00483 81 aa13.94□□□□□ -0.18
CHRFAM7A-202ENST00000397827 GCSHP23434 173 aa13.94□□□□□ -0.18
CHRFAM7A-202ENST00000397827 C9orf139Q6ZV77 190 aa13.94□□□□□ -0.18
CHRFAM7A-202ENST00000397827 F8W1H4 67 aa13.94□□□□□ -0.18
CHRFAM7A-202ENST00000397827 IFI27L1Q96BM0 104 aa13.94□□□□□ -0.18
CHRFAM7A-202ENST00000397827 RNF183Q96D59 192 aa13.94□□□□□ -0.18
CHRFAM7A-202ENST00000397827 FAM208BQ5VWN6 2430 aa13.93□□□□□ -0.18
CHRFAM7A-202ENST00000397827 TRAV26-2A0A0B4J265 109 aa13.93□□□□□ -0.18
CHRFAM7A-202ENST00000397827 PCP2Q8IVA1 136 aa13.93□□□□□ -0.18
CHRFAM7A-202ENST00000397827 UFC1Q9Y3C8 167 aa13.93□□□□□ -0.18
CHRFAM7A-202ENST00000397827 SPRY2O43597 315 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms