RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TMEM126AQ9H061 195 aa12.19□□□□□ -0.46
GNE-202ENST00000396594 CCL18P55774 89 aa12.19□□□□□ -0.46
GNE-202ENST00000396594 TRBV10-1A0A0K0K1A3 114 aa12.19□□□□□ -0.46
GNE-202ENST00000396594 NPYP01303 97 aa12.19□□□□□ -0.46
GNE-202ENST00000396594 U3KQE9 123 aa12.19□□□□□ -0.46
GNE-202ENST00000396594 ACYP1P07311 99 aa12.18□□□□□ -0.46
GNE-202ENST00000396594 NDUFA11Q86Y39 141 aa12.18□□□□□ -0.46
GNE-202ENST00000396594 FGF23Q9GZV9 251 aaPredicted RBP12.18□□□□□ -0.46
GNE-202ENST00000396594 SMIM9A6NGZ8 99 aa12.18□□□□□ -0.46
GNE-202ENST00000396594 ODF3BA8MYP8 253 aa12.18□□□□□ -0.46
GNE-202ENST00000396594 H0YGX0 51 aa12.18□□□□□ -0.46
GNE-202ENST00000396594 GAGE6Q13070 117 aa12.18□□□□□ -0.46
GNE-202ENST00000396594 KLK5Q9Y337 293 aaPredicted RBP12.18□□□□□ -0.46
GNE-202ENST00000396594 IGLC2P0DOY2 106 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 IGLC3P0DOY3 106 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 SEM1Q6ZVN7 128 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 IGKV1-17P01599 117 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 DIAPH2-AS1Q14236 149 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 C1orf43Q9BWL3 253 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 FAM186AA6NE01 2351 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 SDK2Q58EX2 2172 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 POLR3KQ9Y2Y1 108 aaPredicted RBP12.17□□□□□ -0.46
GNE-202ENST00000396594 TEX22C9J3V5 150 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 CEND1Q8N111 149 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 ZNF664Q8N3J9 261 aa12.17□□□□□ -0.46
GNE-202ENST00000396594 APC2O95996 2303 aa12.16□□□□□ -0.46
GNE-202ENST00000396594 ASXL3Q9C0F0 2248 aa12.16□□□□□ -0.46
GNE-202ENST00000396594 TPRP12270 2363 aaKnown RBP12.16□□□□□ -0.46
GNE-202ENST00000396594 A0A0U1RRA0 63 aa12.16□□□□□ -0.46
GNE-202ENST00000396594 C2orf70A6NJV1 201 aa12.16□□□□□ -0.46
GNE-202ENST00000396594 TIMM17AQ99595 171 aa12.16□□□□□ -0.46
GNE-202ENST00000396594 HEATR1Q9H583 2144 aaKnown RBP12.16□□□□□ -0.46
GNE-202ENST00000396594 CTRLP40313 264 aa12.16□□□□□ -0.46
GNE-202ENST00000396594 OBSL1O75147 1896 aa12.16□□□□□ -0.46
GNE-202ENST00000396594 PLXND1Q9Y4D7 1925 aa12.16□□□□□ -0.46
GNE-202ENST00000396594 ANGP03950 147 aaKnown RBP12.16□□□□□ -0.46
GNE-202ENST00000396594 C9JQL5 133 aa12.15□□□□□ -0.46
GNE-202ENST00000396594 ATP6V0E2Q8NHE4 81 aa12.15□□□□□ -0.46
GNE-202ENST00000396594 TRAV8-3A0A0A6YYJ7 113 aa12.15□□□□□ -0.46
GNE-202ENST00000396594 IGHG4P01861 327 aa12.15□□□□□ -0.46
GNE-202ENST00000396594 FER1L5A0AVI2 2057 aa12.15□□□□□ -0.46
GNE-202ENST00000396594 NDUFS7O75251 213 aa12.15□□□□□ -0.46
GNE-202ENST00000396594 EGR2P11161 476 aaPredicted RBP12.15□□□□□ -0.46
GNE-202ENST00000396594 C14orf177Q52M58 125 aa12.15□□□□□ -0.46
GNE-202ENST00000396594 MRPL36Q9P0J6 103 aaKnown RBP12.14□□□□□ -0.47
GNE-202ENST00000396594 COL4A4P53420 1690 aaPredicted RBP12.14□□□□□ -0.47
GNE-202ENST00000396594 H7C423 109 aa12.14□□□□□ -0.47
GNE-202ENST00000396594 ZFP2Q6ZN57 461 aa12.14□□□□□ -0.47
GNE-202ENST00000396594 PRSS29PA6NIE9 313 aa12.14□□□□□ -0.47
GNE-202ENST00000396594 C9JAW5 83 aa12.14□□□□□ -0.47
GNE-202ENST00000396594 IGF1P05019 195 aa12.14□□□□□ -0.47
GNE-202ENST00000396594 IGHV4-38-2P0DP08 117 aa12.14□□□□□ -0.47
GNE-202ENST00000396594 DSCR8Q96T75 97 aa12.14□□□□□ -0.47
GNE-202ENST00000396594 ZNF747Q9BV97 191 aa12.14□□□□□ -0.47
GNE-202ENST00000396594 MRPL35Q9NZE8 188 aaKnown RBP12.14□□□□□ -0.47
GNE-202ENST00000396594 CFHR4Q92496 578 aa12.13□□□□□ -0.47
GNE-202ENST00000396594 CEP290O15078 2479 aa12.13□□□□□ -0.47
GNE-202ENST00000396594 TRAV12-2A0A075B6T6 113 aa12.13□□□□□ -0.47
GNE-202ENST00000396594 CACNA1EQ15878 2313 aa12.13□□□□□ -0.47
GNE-202ENST00000396594 TMEM131Q92545 1883 aa12.12□□□□□ -0.47
GNE-202ENST00000396594 EBI3Q14213 229 aa12.12□□□□□ -0.47
GNE-202ENST00000396594 Q8N7P7 452 aa12.12□□□□□ -0.47
GNE-202ENST00000396594 NOP10Q9NPE3 64 aaKnown RBP12.12□□□□□ -0.47
GNE-202ENST00000396594 ESPL1Q14674 2120 aa12.12□□□□□ -0.47
GNE-202ENST00000396594 Q8NA96 180 aa12.12□□□□□ -0.47
GNE-202ENST00000396594 ALPK2Q86TB3 2170 aa12.12□□□□□ -0.47
GNE-202ENST00000396594 K7EP34 96 aa12.12□□□□□ -0.47
GNE-202ENST00000396594 CRYBA4P53673 196 aa12.11□□□□□ -0.47
GNE-202ENST00000396594 ODF3L1Q8IXM7 274 aa12.11□□□□□ -0.47
GNE-202ENST00000396594 HIGD1BQ9P298 99 aa12.11□□□□□ -0.47
GNE-202ENST00000396594 KIAA1549LQ6ZVL6 1849 aa12.11□□□□□ -0.47
GNE-202ENST00000396594 GRNP28799 593 aaKnown RBP12.11□□□□□ -0.47
GNE-202ENST00000396594 K7EN84 100 aa12.11□□□□□ -0.47
GNE-202ENST00000396594 TMEM263Q8WUH6 116 aaKnown RBP12.11□□□□□ -0.47
GNE-202ENST00000396594 IGHV3-16A0A0C4DH30 117 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 DNAJC13O75165 2243 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 MAPK1IP1LQ8NDC0 245 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 NOTCH4Q99466 2003 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 CGB3P0DN86 165 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 CGB7P0DN87 165 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 GAGE2AQ6NT46 116 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 PIFOQ8TCI5 191 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 SCRT2Q9NQ03 307 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 P0C879 139 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 COX7A2LO14548 114 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 RIPPLY3P57055 190 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 HIST1H4AP62805 103 aaKnown RBP12.1□□□□□ -0.47
GNE-202ENST00000396594 SUMO4Q6EEV6 95 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 ADAMTSL5Q6ZMM2 481 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 FAM167A-AS1Q96KT0 104 aa12.1□□□□□ -0.47
GNE-202ENST00000396594 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
GNE-202ENST00000396594 HEATR5AQ86XA9 2040 aa12.09□□□□□ -0.47
GNE-202ENST00000396594 A0A1W2PNU3 283 aaPredicted RBP12.09□□□□□ -0.47
GNE-202ENST00000396594 ZNF503Q96F45 646 aa12.09□□□□□ -0.47
GNE-202ENST00000396594 DENND4CQ5VZ89 1909 aa12.09□□□□□ -0.47
GNE-202ENST00000396594 CACNA1DQ01668 2161 aa12.08□□□□□ -0.47
GNE-202ENST00000396594 C2orf16Q68DN1 1984 aa12.08□□□□□ -0.48
GNE-202ENST00000396594 NPC2P61916 151 aa12.08□□□□□ -0.48
GNE-202ENST00000396594 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms