RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 UBE2E2Q96LR5 201 aa9.19□□□□□ -0.94
ITGB1-202ENST00000396033 Q8N2B8 174 aa9.19□□□□□ -0.94
ITGB1-202ENST00000396033 LINC00477Q96M19 166 aa9.19□□□□□ -0.94
ITGB1-202ENST00000396033 C2orf70A6NJV1 201 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 HNRNPA3P51991 378 aaKnown RBP9.18□□□□□ -0.94
ITGB1-202ENST00000396033 SYNJ2BPP57105 145 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 TWIST1Q15672 202 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 ZNF493Q6ZR52 646 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 ZNF575Q86XF7 245 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 RNF152Q8N8N0 203 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 CST9LQ9H4G1 147 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 C11orf21Q9P2W6 132 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 LENEPQ9Y5L5 61 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 J3KRW8 73 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 WFDC3Q8IUB2 231 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 TMEM86BQ8N661 226 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 CSTL1Q9H114 145 aa9.18□□□□□ -0.94
ITGB1-202ENST00000396033 IGKV3D-20A0A0C4DH25 116 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 F6UB75 175 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 M0R2Z0 102 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 PRR9Q5T870 116 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 MRPS16Q9Y3D3 137 aaKnown RBP9.17□□□□□ -0.94
ITGB1-202ENST00000396033 SONP18583 2426 aaKnown RBP9.17□□□□□ -0.94
ITGB1-202ENST00000396033 HOXD3P31249 432 aaPredicted RBP9.17□□□□□ -0.94
ITGB1-202ENST00000396033 ID1P41134 155 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 LINC00173Q6ZV60 143 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 KLHDC1Q8N7A1 406 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 OR8A1Q8NGG7 326 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 OCIAD2Q56VL3 154 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 AMN1Q8IY45 258 aa9.17□□□□□ -0.94
ITGB1-202ENST00000396033 SAP30O75446 220 aa9.16□□□□□ -0.94
ITGB1-202ENST00000396033 MPV17L2Q567V2 206 aa9.16□□□□□ -0.94
ITGB1-202ENST00000396033 SAMD13Q5VXD3 122 aa9.16□□□□□ -0.94
ITGB1-202ENST00000396033 Q6ZQT7 251 aa9.16□□□□□ -0.94
ITGB1-202ENST00000396033 FOXC2Q99958 501 aa9.16□□□□□ -0.94
ITGB1-202ENST00000396033 PDZD2O15018 2839 aa9.16□□□□□ -0.94
ITGB1-202ENST00000396033 FAM104BQ5XKR9 115 aa9.16□□□□□ -0.94
ITGB1-202ENST00000396033 DCANP1Q8TF63 244 aa9.16□□□□□ -0.94
ITGB1-202ENST00000396033 DNAJC9-AS1A6NH13 148 aa9.16□□□□□ -0.94
ITGB1-202ENST00000396033 CHCHD1Q96BP2 118 aaKnown RBP9.16□□□□□ -0.94
ITGB1-202ENST00000396033 MYO9AB2RTY4 2548 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 LGALS9O00182 355 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 CSN3P07498 182 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 C18orf65Q6ZTR6 163 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 ZFAND2AQ8N6M9 145 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 CNFNQ9BYD5 112 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 D6R8Y8 96 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 PMCHL1Q16048 86 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 DEFB136Q30KP8 78 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 KHDC1LQ5JSQ8 128 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 MS4A6AQ9H2W1 248 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 YAE1D1Q9NRH1 226 aa9.15□□□□□ -0.94
ITGB1-202ENST00000396033 UNC79Q9P2D8 2635 aa9.14□□□□□ -0.95
ITGB1-202ENST00000396033 CD5LO43866 347 aa9.14□□□□□ -0.95
ITGB1-202ENST00000396033 KRTAP1-1Q07627 177 aa9.14□□□□□ -0.95
ITGB1-202ENST00000396033 MSRB1Q9NZV6 116 aa9.14□□□□□ -0.95
ITGB1-202ENST00000396033 MCRIP2Q9BUT9 160 aaKnown RBP9.14□□□□□ -0.95
ITGB1-202ENST00000396033 TRAV8-6A0A0B4J262 113 aa9.14□□□□□ -0.95
ITGB1-202ENST00000396033 TRAV21A0A0B4J279 112 aa9.14□□□□□ -0.95
ITGB1-202ENST00000396033 CBY3A6NI87 242 aa9.14□□□□□ -0.95
ITGB1-202ENST00000396033 MRPL51Q4U2R6 128 aaKnown RBP9.14□□□□□ -0.95
ITGB1-202ENST00000396033 ITPR2Q14571 2701 aa9.14□□□□□ -0.95
ITGB1-202ENST00000396033 TMEM238C9JI98 176 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 SLURP1P55000 103 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 Q6ZSV7 163 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 ORMDL3Q8N138 153 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 TMEM191AQ9H0A3 160 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 IGHV1-24A0A0C4DH33 117 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 ZNF688P0C7X2 276 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 FAM19A4Q96LR4 140 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 PRELID3AQ96N28 172 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 AKAP9Q99996 3911 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 RNASE4P34096 147 aaKnown RBP9.13□□□□□ -0.95
ITGB1-202ENST00000396033 PSMG4Q5JS54 123 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 OR4C5Q8NGB2 326 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 U3KQK5 164 aa9.13□□□□□ -0.95
ITGB1-202ENST00000396033 OR10AG1Q8NH19 301 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 hDV102S1A0JD36 115 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 LINC01619G3V211 115 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 SNRPD3P62318 126 aaKnown RBP9.12□□□□□ -0.95
ITGB1-202ENST00000396033 BVES-AS1Q5T3Y7 98 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 AMMECR1LQ6DCA0 310 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 C4orf3Q8WVX3 66 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 ESM1Q9NQ30 184 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 H3BVH4 76 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 CKS2P33552 79 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 TCTEX1D4Q5JR98 221 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 FA2HQ7L5A8 372 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 PRSS3P2Q8NHM4 247 aa9.12□□□□□ -0.95
ITGB1-202ENST00000396033 TIMM8BQ9Y5J9 83 aaPredicted RBP9.12□□□□□ -0.95
ITGB1-202ENST00000396033 TRBV7-9A0A0J9YWB2 115 aa9.11□□□□□ -0.95
ITGB1-202ENST00000396033 SMKR1H3BMG3 65 aa9.11□□□□□ -0.95
ITGB1-202ENST00000396033 KIR3DS1Q14943 382 aa9.11□□□□□ -0.95
ITGB1-202ENST00000396033 OR11H1Q8NG94 326 aa9.11□□□□□ -0.95
ITGB1-202ENST00000396033 DPF1Q92782 380 aa9.11□□□□□ -0.95
ITGB1-202ENST00000396033 K7EQG2 157 aa9.11□□□□□ -0.95
ITGB1-202ENST00000396033 NCR2O95944 276 aa9.11□□□□□ -0.95
ITGB1-202ENST00000396033 RIPPLY3P57055 190 aa9.11□□□□□ -0.95
ITGB1-202ENST00000396033 TRAV9-2A0A087WT02 112 aa9.11□□□□□ -0.95
ITGB1-202ENST00000396033 LOC389332A0A1B0GUA5 103 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms