RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 C8orf49Q96NF6 230 aa9.51□□□□□ -0.89
CXCL12-205ENST00000395794 FAT2Q9NYQ8 4349 aa9.51□□□□□ -0.89
CXCL12-205ENST00000395794 NACAE9PAV3 2078 aa9.51□□□□□ -0.89
CXCL12-205ENST00000395794 A0A1W2PPQ1 181 aa9.5□□□□□ -0.89
CXCL12-205ENST00000395794 MED14OSP0DP75 135 aa9.5□□□□□ -0.89
CXCL12-205ENST00000395794 CRYBA4P53673 196 aa9.5□□□□□ -0.89
CXCL12-205ENST00000395794 SUMO1P63165 101 aaKnown RBP9.5□□□□□ -0.89
CXCL12-205ENST00000395794 FHL2Q14192 279 aa9.5□□□□□ -0.89
CXCL12-205ENST00000395794 SUN5Q8TC36 379 aa9.5□□□□□ -0.89
CXCL12-205ENST00000395794 SGK494Q96LW2 274 aa9.5□□□□□ -0.89
CXCL12-205ENST00000395794 RNF222A6NCQ9 220 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 FBLL1A6NHQ2 334 aaKnown RBP9.49□□□□□ -0.89
CXCL12-205ENST00000395794 M0R2P5 195 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 TAAR5O14804 337 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 GNRH2O43555 120 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 SAPCD1Q5SSQ6 148 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 AKR1C8PQ5T2L2 129 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 CYB561D1Q8N8Q1 229 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 OR4C5Q8NGB2 326 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 TVP23CQ96ET8 276 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 EPDR1Q9UM22 224 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 PSG8Q9UQ74 426 aa9.49□□□□□ -0.89
CXCL12-205ENST00000395794 HERC2O95714 4834 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 IGHV3-16A0A0C4DH30 117 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 CTXND1A0A1B0GTU2 59 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 IFNA7P01567 189 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 ORM1P02763 201 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 SFTA3P0C7M3 94 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 BTF3P20290 206 aaKnown RBP9.48□□□□□ -0.89
CXCL12-205ENST00000395794 SRIP30626 198 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 FLI1Q01543 452 aaPredicted RBP9.48□□□□□ -0.89
CXCL12-205ENST00000395794 TNP2Q05952 138 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 SMUG1Q53HV7 270 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 NEGR1Q7Z3B1 354 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 ZNF479Q96JC4 524 aa9.48□□□□□ -0.89
CXCL12-205ENST00000395794 TRAV4A0A0B4J268 109 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 A0A1W2PRE2 83 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 GGTLC3B5MD39 225 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 SIVA1O15304 175 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 ARPC5O15511 151 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 NXPH4O95158 308 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 GCGP01275 180 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 TYMSP04818 313 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 PPT1P50897 306 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 TMEM75Q8N9X5 138 aa9.47□□□□□ -0.89
CXCL12-205ENST00000395794 NKX6-2Q9C056 277 aaPredicted RBP9.47□□□□□ -0.89
CXCL12-205ENST00000395794 C9JCJ5 164 aa9.46□□□□□ -0.9
CXCL12-205ENST00000395794 PFN1P07737 140 aaKnown RBP9.46□□□□□ -0.9
CXCL12-205ENST00000395794 GYPEP15421 78 aa9.46□□□□□ -0.9
CXCL12-205ENST00000395794 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
CXCL12-205ENST00000395794 TXNDC17Q9BRA2 123 aa9.46□□□□□ -0.9
CXCL12-205ENST00000395794 TRAV9-2A0A087WT02 112 aa9.45□□□□□ -0.9
CXCL12-205ENST00000395794 UBE2G2P60604 165 aa9.45□□□□□ -0.9
CXCL12-205ENST00000395794 ZNF876PQ49A33 203 aa9.45□□□□□ -0.9
CXCL12-205ENST00000395794 STOML3Q8TAV4 291 aa9.45□□□□□ -0.9
CXCL12-205ENST00000395794 KRTAP1-5Q9BYS1 174 aa9.45□□□□□ -0.9
CXCL12-205ENST00000395794 PKD1P98161 4303 aa9.45□□□□□ -0.9
CXCL12-205ENST00000395794 KIAA1109Q2LD37 5005 aa9.44□□□□□ -0.9
CXCL12-205ENST00000395794 C16orf90A8MZG2 172 aa9.44□□□□□ -0.9
CXCL12-205ENST00000395794 K7EQD1 137 aa9.44□□□□□ -0.9
CXCL12-205ENST00000395794 IGLV2-11P01706 119 aa9.44□□□□□ -0.9
CXCL12-205ENST00000395794 ZNF80P51504 273 aaPredicted RBP9.44□□□□□ -0.9
CXCL12-205ENST00000395794 FGF8P55075 233 aaPredicted RBP9.44□□□□□ -0.9
CXCL12-205ENST00000395794 ZNF726P1Q15940 193 aa9.44□□□□□ -0.9
CXCL12-205ENST00000395794 SH2D6Q7Z4S9 175 aa9.44□□□□□ -0.9
CXCL12-205ENST00000395794 ZNF575Q86XF7 245 aa9.44□□□□□ -0.9
CXCL12-205ENST00000395794 PKHD1P08F94 4074 aa9.43□□□□□ -0.9
CXCL12-205ENST00000395794 MAP1LC3B2A6NCE7 125 aa9.43□□□□□ -0.9
CXCL12-205ENST00000395794 CIDEAO60543 219 aa9.43□□□□□ -0.9
CXCL12-205ENST00000395794 NHLRC2Q8NBF2 726 aa9.43□□□□□ -0.9
CXCL12-205ENST00000395794 HIST1H2BAQ96A08 127 aa9.43□□□□□ -0.9
CXCL12-205ENST00000395794 MAP1LC3BQ9GZQ8 125 aa9.43□□□□□ -0.9
CXCL12-205ENST00000395794 TRAV34A0A0B4J273 112 aa9.42□□□□□ -0.9
CXCL12-205ENST00000395794 FABP5P3A8MUU1 101 aa9.42□□□□□ -0.9
CXCL12-205ENST00000395794 G3V3Q6 166 aa9.42□□□□□ -0.9
CXCL12-205ENST00000395794 PEX7O00628 323 aa9.42□□□□□ -0.9
CXCL12-205ENST00000395794 S100A4P26447 101 aaKnown RBP9.42□□□□□ -0.9
CXCL12-205ENST00000395794 LINC00479Q96M42 142 aa9.42□□□□□ -0.9
CXCL12-205ENST00000395794 LY96Q9Y6Y9 160 aa9.42□□□□□ -0.9
CXCL12-205ENST00000395794 ARL2-SNX15V9GYD0 113 aa9.42□□□□□ -0.9
CXCL12-205ENST00000395794 MUC4Q99102 2169 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 FAM74A7A6NL05 159 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 SMLR1H3BR10 107 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 K7EP13 123 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 EVI2AP22794 236 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 LINC00315P59091 139 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 NFE4Q86UQ8 179 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 PRADC1Q9BSG0 188 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 CYTL1Q9NRR1 136 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 C11orf21Q9P2W6 132 aa9.41□□□□□ -0.9
CXCL12-205ENST00000395794 EREGO14944 169 aa9.4□□□□□ -0.9
CXCL12-205ENST00000395794 GATA1P15976 413 aaPredicted RBP9.4□□□□□ -0.9
CXCL12-205ENST00000395794 UBE2G1P62253 170 aa9.4□□□□□ -0.9
CXCL12-205ENST00000395794 ZNF345Q14585 488 aa9.4□□□□□ -0.9
CXCL12-205ENST00000395794 CST9LP1Q5W188 147 aa9.4□□□□□ -0.9
CXCL12-205ENST00000395794 SPATA12Q7Z6I5 190 aa9.4□□□□□ -0.9
CXCL12-205ENST00000395794 KCNRGQ8N5I3 272 aa9.4□□□□□ -0.9
CXCL12-205ENST00000395794 PTH2Q96A98 100 aa9.4□□□□□ -0.9
CXCL12-205ENST00000395794 C9orf85Q96MD7 179 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms