RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 COL4A5P29400 1685 aa9.68□□□□□ -0.86
SIN3A-202ENST00000394947 SBF2Q86WG5 1849 aa9.68□□□□□ -0.86
SIN3A-202ENST00000394947 ELANEP08246 267 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 MUSTN1Q8IVN3 82 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 NDUFA4L2Q9NRX3 87 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 IGKV1-6A0A0C4DH72 117 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 TMEM61Q8N0U2 210 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 SLC25A29Q8N8R3 303 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 VOPP1Q96AW1 172 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 SMIM27A0A1W2PRY6 76 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 IGLL5B9A064 214 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 H3BRN7 92 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 MP68P56378 58 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 LY96Q9Y6Y9 160 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 COL11A2P13942 1736 aaPredicted RBP9.67□□□□□ -0.86
SIN3A-202ENST00000394947 IGLV3-32A0A0A0MS00 114 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 F8VRH5 84 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 NRGNQ92686 78 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 Q0VG73 95 aa9.67□□□□□ -0.86
SIN3A-202ENST00000394947 BRCA1P38398 1863 aaKnown RBP9.66□□□□□ -0.86
SIN3A-202ENST00000394947 IGHV7-4-1A0A0J9YVY3 117 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 NDUFC2O95298 119 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 CSRP1P21291 193 aaKnown RBP9.66□□□□□ -0.86
SIN3A-202ENST00000394947 PDE6HQ13956 83 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 TMEM14BQ9NUH8 114 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 C17orf58Q2M2W7 97 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 FAM231DQ6ZW35 169 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 ZNF407Q9C0G0 2248 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 CFC1BP0CG36 223 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 CFC1P0CG37 223 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 RHOHQ15669 191 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 GTSF1Q8WW33 167 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 TSC2P49815 1807 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 DEFB112Q30KQ8 113 aa9.66□□□□□ -0.86
SIN3A-202ENST00000394947 IGKV2D-26A0A0A0MRZ7 120 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 NDUFA4O00483 81 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 TET1Q8NFU7 2136 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 IGKV2-24A0A0C4DH68 120 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 ZNF492Q9P255 531 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 NHSL1Q5SYE7 1610 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 CEP290O15078 2479 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 K7EN84 100 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 RNF138Q8WVD3 245 aa9.65□□□□□ -0.86
SIN3A-202ENST00000394947 QRFPP83859 136 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 LGALS9BQ3B8N2 356 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 LGALS9CQ6DKI2 356 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 SCXQ7RTU7 201 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 DOCK8Q8NF50 2099 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 ICOSQ9Y6W8 199 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 ZNF833PQ6ZTB9 187 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 COX7A2LO14548 114 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 B3GALT5-AS1P59052 145 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 DEFB1P60022 68 aa9.64□□□□□ -0.87
SIN3A-202ENST00000394947 ZDBF2Q9HCK1 2354 aa9.63□□□□□ -0.87
SIN3A-202ENST00000394947 COL4A6Q14031 1691 aa9.63□□□□□ -0.87
SIN3A-202ENST00000394947 WT1-ASQ06250 92 aa9.63□□□□□ -0.87
SIN3A-202ENST00000394947 FAM110AQ9BQ89 295 aa9.63□□□□□ -0.87
SIN3A-202ENST00000394947 IGHV4-30-2A0A087WSY4 118 aa9.63□□□□□ -0.87
SIN3A-202ENST00000394947 RPL39P62891 51 aaKnown RBP9.63□□□□□ -0.87
SIN3A-202ENST00000394947 LINC00173Q6ZV60 143 aa9.63□□□□□ -0.87
SIN3A-202ENST00000394947 UBR3Q6ZT12 1888 aa9.63□□□□□ -0.87
SIN3A-202ENST00000394947 CSRP3P50461 194 aa9.63□□□□□ -0.87
SIN3A-202ENST00000394947 CCL18P55774 89 aa9.63□□□□□ -0.87
SIN3A-202ENST00000394947 FXYD5Q96DB9 178 aa9.62□□□□□ -0.87
SIN3A-202ENST00000394947 HRCT1Q6UXD1 115 aa9.62□□□□□ -0.87
SIN3A-202ENST00000394947 ABCA4P78363 2273 aa9.62□□□□□ -0.87
SIN3A-202ENST00000394947 ZNF503-AS2A6NEH8 195 aa9.62□□□□□ -0.87
SIN3A-202ENST00000394947 YPEL3P61236 119 aaPredicted RBP9.62□□□□□ -0.87
SIN3A-202ENST00000394947 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
SIN3A-202ENST00000394947 GRNP28799 593 aaKnown RBP9.62□□□□□ -0.87
SIN3A-202ENST00000394947 SPTBN1Q01082 2364 aaKnown RBP9.62□□□□□ -0.87
SIN3A-202ENST00000394947 K7EQD1 137 aa9.62□□□□□ -0.87
SIN3A-202ENST00000394947 IGLV3-19P01714 112 aa9.62□□□□□ -0.87
SIN3A-202ENST00000394947 GP9P14770 177 aa9.62□□□□□ -0.87
SIN3A-202ENST00000394947 PLXND1Q9Y4D7 1925 aa9.62□□□□□ -0.87
SIN3A-202ENST00000394947 TRAV23DV6A0A075B6W5 121 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 WISP1O95388 367 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 IGHV4-30-4P0DP06 118 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 IGHV4-31P0DP07 118 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 PRR20EP86478 221 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 PRR20CP86479 221 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 PRR20DP86480 221 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 PRR20BP86481 221 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 PRR20AP86496 221 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 Q6ZR03 302 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 RITA1Q96K30 269 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 MRPL36Q9P0J6 103 aaKnown RBP9.61□□□□□ -0.87
SIN3A-202ENST00000394947 HELZP42694 1942 aaKnown RBP9.61□□□□□ -0.87
SIN3A-202ENST00000394947 GATA3P23771 443 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 HIST2H2BDQ6DRA6 164 aa9.61□□□□□ -0.87
SIN3A-202ENST00000394947 ATP6V0E2Q8NHE4 81 aa9.6□□□□□ -0.87
SIN3A-202ENST00000394947 TRAV26-1A0A087WT03 109 aa9.6□□□□□ -0.87
SIN3A-202ENST00000394947 A0A0B4J2C4 111 aa9.6□□□□□ -0.87
SIN3A-202ENST00000394947 C20orf144Q9BQM9 153 aa9.6□□□□□ -0.87
SIN3A-202ENST00000394947 LECT2O14960 151 aa9.6□□□□□ -0.87
SIN3A-202ENST00000394947 IGHV4-38-2P0DP08 117 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms