RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 MMD2Q8IY49 270 aa4.01□□□□□ -1.77
TSPAN8-202ENST00000393330 ZCCHC24Q8N2G6 241 aaKnown RBP4.01□□□□□ -1.77
TSPAN8-202ENST00000393330 LRTM2Q8N967 370 aa4.01□□□□□ -1.77
TSPAN8-202ENST00000393330 RPS4Y2Q8TD47 263 aa4.01□□□□□ -1.77
TSPAN8-202ENST00000393330 OR2W1Q9Y3N9 320 aa4.01□□□□□ -1.77
TSPAN8-202ENST00000393330 ARL2-SNX15V9GYD0 113 aa4.01□□□□□ -1.77
TSPAN8-202ENST00000393330 TRBV5-3A0A0A0MS03 114 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 TRAV4A0A0B4J268 109 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 A0A0U1RQV1 116 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 A0A1W2PS18 150 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 A8MWL6 223 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 E9PLD3 99 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 C11orf98E9PRG8 122 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 TRACP01848 142 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 PSMB8P28062 276 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 Q56UQ5 140 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 FAM201AQ5SY85 155 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 C1orf140Q5VVS0 124 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 ACP7Q6ZNF0 438 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 Q75L30 129 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 LINC01006Q8NI28 216 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 PIFOQ8TCI5 191 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 C2orf50Q96LR7 162 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 LINC00479Q96M42 142 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 EMC6Q9BV81 110 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 RNF7Q9UBF6 113 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 DNAH7Q8WXX0 4024 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 TRAV13-1A0A0B4J241 112 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 TRAV1-1A0A0B4J248 108 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 RBAKDNA6NC62 111 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 WNT9BO14905 357 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 P0DMU3 169 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 FAM231AP0DMU4 169 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 FAM231CP0DMU5 169 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 FGF6P10767 208 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 LMO4P61968 165 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 RPL23P62829 140 aaKnown RBP4□□□□□ -1.77
TSPAN8-202ENST00000393330 CCL20P78556 96 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 EBI3Q14213 229 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 INSL4Q14641 139 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 LHFPL1Q86WI0 220 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 TEN1Q86WV5 123 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 MSRB3Q8IXL7 192 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 NUP37Q8NFH4 326 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 C11orf45Q8TAV5 145 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 SMIM7Q9BQ49 75 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 CACNG5Q9UF02 275 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 HILPDAQ9Y5L2 63 aa4□□□□□ -1.77
TSPAN8-202ENST00000393330 HECTD4Q9Y4D8 3996 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 TRAV27A0A087WT01 109 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 WI2-2373I1.2A0A1W2PRP0 233 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 UBE2E1P51965 193 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 CLDN17P56750 224 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 SP6Q3SY56 376 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 PAPPA-AS1Q5QFB9 102 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 TCF23Q7RTU1 214 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 C11orf53Q8IXP5 236 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 BORCS8Q96FH0 119 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 UBE2E2Q96LR5 201 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 GNB4Q9HAV0 340 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 TNFRSF19Q9NS68 423 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 KLK5Q9Y337 293 aaPredicted RBP3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 WNK2Q9Y3S1 2297 aa3.99□□□□□ -1.77
TSPAN8-202ENST00000393330 IGKV1D-42A0A075B6H8 117 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 TRBV7-7A0A0K0K1E9 115 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 A0A1B0GWA3 101 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 SPRY3O43610 288 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 COX7CP15954 63 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 MPV17P39210 176 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 CSN1S1P47710 185 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 HERV-K104P61576 105 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 C12orf74Q32Q52 190 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 PHLDA2Q53GA4 152 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 CFAP126Q5VTH2 177 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 C9orf139Q6ZV77 190 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 FAM57BQ71RH2 274 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 COX8CQ7Z4L0 72 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 NFE4Q86UQ8 179 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 NUP35Q8NFH5 326 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 FGFBP3Q8TAT2 258 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 TMEM255BQ8WV15 326 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 C18orf15Q96N68 181 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 CHCHD5Q9BSY4 110 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 AGPAT4-IT1Q9H0P7 198 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 CSMD3Q7Z407 3707 aa3.98□□□□□ -1.77
TSPAN8-202ENST00000393330 FAM24AA6NFZ4 105 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 NCBP2LA6PVI3 153 aaKnown RBP3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 SRRM5B3KS81 715 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 F2Z2F3 143 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 APCSP02743 223 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 APOHP02749 345 aaPredicted RBP3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 OR5AL1P0C617 328 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 HLA-DOBP13765 273 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 APOC4P55056 127 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 ARFRP1Q13795 201 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 ZC2HC1BQ5TFG8 222 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 TRAPPC6BQ86SZ2 158 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 MDP1Q86V88 176 aa3.97□□□□□ -1.77
TSPAN8-202ENST00000393330 TSKUQ8WUA8 353 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms