RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 USP54Q70EL1 1684 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 PRRC2AP48634 2157 aaKnown RBP1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 NRKQ7Z2Y5 1582 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 MPDZO75970 2070 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 KRTAP4-8A0A0G2JLE6 195 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 TCRBV3S1A0A5B6 114 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 TMEM30CPA0ZSE6 113 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 OOSP1A8MZH6 123 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 CCL16O15467 120 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 GYPBP06028 91 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 IL7P13232 177 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 CNBPP62633 177 aaKnown RBP1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 S100A7L2Q5SY68 101 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 Q6ZS92 163 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 FP248Q71RG6 208 aaPredicted RBP1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 TMEM141Q96I45 108 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 LINC00052Q96N35 136 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 KRTAP17-1Q9BYP8 105 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 NDUFA12Q9UI09 145 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 MYO9BQ13459 2157 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 ZFYVE16Q7Z3T8 1539 aa1.35□□□□□ -2.19
RNU6-220P-201ENST00000390919 FREM3P0C091 2139 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 STRCQ7RTU9 1775 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 SDK2Q58EX2 2172 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 SHANK1Q9Y566 2161 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 DAPK1P53355 1430 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 WDR97A6NE52 1622 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 IGHV3-33P01772 117 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 LINC00032P0C843 101 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 CBLN1P23435 193 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 DCDP81605 110 aaKnown RBP1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 TPRXLQ17RH7 258 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 IQCJQ1A5X6 159 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 HCP5Q6MZN7 132 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 LINC00299Q6ZSB3 139 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 C10orf105Q8TEF2 133 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 LSM10Q969L4 123 aaKnown RBP1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 DPY30Q9C005 99 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 V9GYS6 101 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 NINQ8N4C6 2090 aa1.34□□□□□ -2.19
RNU6-220P-201ENST00000390919 COL24A1Q17RW2 1714 aa1.34□□□□□ -2.2
RNU6-220P-201ENST00000390919 MUC4Q99102 2169 aa1.34□□□□□ -2.2
RNU6-220P-201ENST00000390919 RB1CC1Q8TDY2 1594 aa1.34□□□□□ -2.2
RNU6-220P-201ENST00000390919 COL1A2P08123 1366 aa1.34□□□□□ -2.2
RNU6-220P-201ENST00000390919 NSD3Q9BZ95 1437 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 TRPM7Q96QT4 1865 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 ABCC10Q5T3U5 1492 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 TMEM262E9PQX1 116 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 P0C880 135 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 PRB4P10163 310 aaPredicted RBP1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 SLC25A6P12236 298 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 ATP5EP56381 51 aaPredicted RBP1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 UBE2G1P62253 170 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 UBA52P62987 128 aaKnown RBP1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 C10orf55Q5SWW7 151 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 SLC48A1Q6P1K1 146 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 COA5Q86WW8 74 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 C4orf33Q8N1A6 199 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 PATE1Q8WXA2 126 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 SNHG12Q9BXW3 62 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 KRTAP4-9Q9BYQ8 210 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 ATG5Q9H1Y0 275 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 CDC42SE1Q9NRR8 79 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 TMEM106BQ9NUM4 274 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 DISP1Q96F81 1524 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 LAMB4A4D0S4 1761 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 LAMB2P55268 1798 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 KIDINS220Q9ULH0 1771 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 TTC37Q6PGP7 1564 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 ZSWIM8A7E2V4 1837 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 ZFHX2Q9C0A1 2572 aaPredicted RBP1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 NUMA1Q14980 2115 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 MED12LQ86YW9 2145 aa1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 HEATR1Q9H583 2144 aaKnown RBP1.33□□□□□ -2.2
RNU6-220P-201ENST00000390919 AKAP12Q02952 1782 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 KIAA1549LQ6ZVL6 1849 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 IGLV3-32A0A0A0MS00 114 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 UBE2L5PA0A1B0GUS4 154 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 TRBV6-4A0A1B0GX49 114 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 SSSCA1O60232 199 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 NUPR1O60356 82 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 MPC2O95563 127 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 IGKCP01834 107 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 IGKV4-1P06312 121 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 KRTAP10-12P60413 245 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 UBE2L3P68036 154 aaKnown RBP1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 RBM3P98179 157 aaKnown RBP1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 C9orf116Q5BN46 136 aaPredicted RBP1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 KRTAP26-1Q6PEX3 210 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 LYPD5Q6UWN5 251 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 C5orf38Q86SI9 138 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 NDUFA11Q86Y39 141 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 SPTSSBQ8NFR3 76 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 SPACA4Q8TDM5 124 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 DSCR8Q96T75 97 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 KRTAP4-11Q9BYQ6 195 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 REG4Q9BYZ8 158 aa1.32□□□□□ -2.2
RNU6-220P-201ENST00000390919 TMEM14CQ9P0S9 112 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms