RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 FAM19A2Q8N3H0 131 aa18.87■□□□□ 0.61
SHOX2-201ENST00000389589 A0A0J9YX75 114 aa18.86■□□□□ 0.61
SHOX2-201ENST00000389589 TRAV2A0A0B4J234 112 aa18.86■□□□□ 0.61
SHOX2-201ENST00000389589 LINC00614P0C842 121 aa18.86■□□□□ 0.61
SHOX2-201ENST00000389589 MRPL51Q4U2R6 128 aaKnown RBP18.86■□□□□ 0.61
SHOX2-201ENST00000389589 ORMDL3Q8N138 153 aa18.86■□□□□ 0.61
SHOX2-201ENST00000389589 DLX4Q92988 240 aaPredicted RBP18.86■□□□□ 0.61
SHOX2-201ENST00000389589 DUX3Q96PT4 197 aa18.86■□□□□ 0.61
SHOX2-201ENST00000389589 LEPP41159 167 aa18.85■□□□□ 0.61
SHOX2-201ENST00000389589 LINC01006Q8NI28 216 aa18.85■□□□□ 0.61
SHOX2-201ENST00000389589 MSRB1Q9NZV6 116 aa18.85■□□□□ 0.61
SHOX2-201ENST00000389589 IGHV4-4A0A075B6R2 117 aa18.85■□□□□ 0.61
SHOX2-201ENST00000389589 D6R8Y8 96 aa18.85■□□□□ 0.61
SHOX2-201ENST00000389589 M0R2Z0 102 aa18.85■□□□□ 0.61
SHOX2-201ENST00000389589 DUSP14O95147 198 aaKnown RBP18.84■□□□□ 0.61
SHOX2-201ENST00000389589 PRELID3AQ96N28 172 aa18.84■□□□□ 0.61
SHOX2-201ENST00000389589 JMJD8Q96S16 334 aa18.84■□□□□ 0.61
SHOX2-201ENST00000389589 CSN3P07498 182 aa18.83■□□□□ 0.61
SHOX2-201ENST00000389589 SMR3AQ99954 134 aa18.83■□□□□ 0.61
SHOX2-201ENST00000389589 MED14OSP0DP75 135 aa18.83■□□□□ 0.6
SHOX2-201ENST00000389589 CD28P10747 220 aa18.83■□□□□ 0.6
SHOX2-201ENST00000389589 CD33P20138 364 aa18.83■□□□□ 0.6
SHOX2-201ENST00000389589 FOXI2Q6ZQN5 318 aa18.83■□□□□ 0.6
SHOX2-201ENST00000389589 SMIM15Q7Z3B0 74 aa18.83■□□□□ 0.6
SHOX2-201ENST00000389589 OR10AG1Q8NH19 301 aa18.83■□□□□ 0.6
SHOX2-201ENST00000389589 LY6G6DO95868 133 aa18.82■□□□□ 0.6
SHOX2-201ENST00000389589 ASIPP42127 132 aa18.82■□□□□ 0.6
SHOX2-201ENST00000389589 ANXA2RQ3ZCQ2 193 aa18.82■□□□□ 0.6
SHOX2-201ENST00000389589 H3BVH4 76 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 PPBPP02775 128 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 CKS2P33552 79 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 KRTDAPP60985 99 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 RAX2Q96IS3 184 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 TSSC4Q9Y5U2 329 aaPredicted RBP18.81■□□□□ 0.6
SHOX2-201ENST00000389589 RAB4AP20338 218 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 FHL3Q13643 280 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 KIR3DS1Q14943 382 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 SPANXN1Q5VSR9 72 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 DYNLRB2Q8TF09 96 aa18.81■□□□□ 0.6
SHOX2-201ENST00000389589 NDUFA7O95182 113 aa18.8■□□□□ 0.6
SHOX2-201ENST00000389589 S100A4P26447 101 aaKnown RBP18.8■□□□□ 0.6
SHOX2-201ENST00000389589 PKIAP61925 76 aa18.8■□□□□ 0.6
SHOX2-201ENST00000389589 RNF185Q96GF1 192 aa18.8■□□□□ 0.6
SHOX2-201ENST00000389589 TSPOP30536 169 aa18.8■□□□□ 0.6
SHOX2-201ENST00000389589 PRSS3P2Q8NHM4 247 aa18.79■□□□□ 0.6
SHOX2-201ENST00000389589 RNF114Q9Y508 228 aa18.79■□□□□ 0.6
SHOX2-201ENST00000389589 HIVEP2P31629 2446 aa18.79■□□□□ 0.6
SHOX2-201ENST00000389589 MTORP42345 2549 aa18.79■□□□□ 0.6
SHOX2-201ENST00000389589 C7orf71A4D174 169 aa18.78■□□□□ 0.6
SHOX2-201ENST00000389589 C11orf44Q8N8P7 122 aa18.78■□□□□ 0.6
SHOX2-201ENST00000389589 LAMTOR2Q9Y2Q5 125 aa18.78■□□□□ 0.6
SHOX2-201ENST00000389589 TSTD3H0UI37 97 aa18.78■□□□□ 0.6
SHOX2-201ENST00000389589 CCL24O00175 119 aa18.78■□□□□ 0.6
SHOX2-201ENST00000389589 NF1P21359 2839 aa18.77■□□□□ 0.6
SHOX2-201ENST00000389589 IGHV1-24A0A0C4DH33 117 aa18.77■□□□□ 0.6
SHOX2-201ENST00000389589 FA2HQ7L5A8 372 aa18.77■□□□□ 0.6
SHOX2-201ENST00000389589 TMEM61Q8N0U2 210 aa18.77■□□□□ 0.6
SHOX2-201ENST00000389589 CITED2Q99967 270 aaPredicted RBP18.77■□□□□ 0.6
SHOX2-201ENST00000389589 AP5S1Q9NUS5 200 aa18.77■□□□□ 0.6
SHOX2-201ENST00000389589 A0A1W2PRX2 142 aa18.77■□□□□ 0.59
SHOX2-201ENST00000389589 C3orf79P0CE67 100 aa18.77■□□□□ 0.59
SHOX2-201ENST00000389589 DEFB114Q30KQ6 69 aa18.77■□□□□ 0.59
SHOX2-201ENST00000389589 HIST2H2BDQ6DRA6 164 aa18.77■□□□□ 0.59
SHOX2-201ENST00000389589 FAM159AQ6UWV7 190 aa18.77■□□□□ 0.59
SHOX2-201ENST00000389589 SCRT2Q9NQ03 307 aa18.76■□□□□ 0.59
SHOX2-201ENST00000389589 CDKN1BP46527 198 aa18.75■□□□□ 0.59
SHOX2-201ENST00000389589 ZNF664Q8N3J9 261 aa18.75■□□□□ 0.59
SHOX2-201ENST00000389589 PHLDA3Q9Y5J5 127 aa18.75■□□□□ 0.59
SHOX2-201ENST00000389589 TIMM8BQ9Y5J9 83 aaPredicted RBP18.75■□□□□ 0.59
SHOX2-201ENST00000389589 AGRNO00468 2067 aa18.74■□□□□ 0.59
SHOX2-201ENST00000389589 EVI2AP22794 236 aa18.74■□□□□ 0.59
SHOX2-201ENST00000389589 TEX43Q6ZNM6 134 aa18.74■□□□□ 0.59
SHOX2-201ENST00000389589 SIGLEC8Q9NYZ4 499 aa18.74■□□□□ 0.59
SHOX2-201ENST00000389589 TRAV12-3A0A0B4J271 114 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 SMKR1H3BMG3 65 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 GNRH2O43555 120 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 TCF21O43680 179 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 IGKV3-20P01619 116 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 PMCHL1Q16048 86 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 TRAV25A0A0B4J276 109 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 NPYP01303 97 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 IFI27P40305 119 aaPredicted RBP18.73■□□□□ 0.59
SHOX2-201ENST00000389589 DEFB131AP59861 70 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 TDRG1Q3Y452 100 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 Q8N976 141 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 SORL1Q92673 2214 aa18.73■□□□□ 0.59
SHOX2-201ENST00000389589 LINC00587B1AMM8 73 aa18.72■□□□□ 0.59
SHOX2-201ENST00000389589 LEPROTL1O95214 131 aa18.72■□□□□ 0.59
SHOX2-201ENST00000389589 NCR2O95944 276 aa18.72■□□□□ 0.59
SHOX2-201ENST00000389589 BTF3P20290 206 aaKnown RBP18.72■□□□□ 0.59
SHOX2-201ENST00000389589 SPAG8Q99932 426 aaPredicted RBP18.72■□□□□ 0.59
SHOX2-201ENST00000389589 OR4C46A6NHA9 309 aa18.72■□□□□ 0.59
SHOX2-201ENST00000389589 RNASE3P12724 160 aaKnown RBP18.72■□□□□ 0.59
SHOX2-201ENST00000389589 PRO1933Q9H354 126 aa18.72■□□□□ 0.59
SHOX2-201ENST00000389589 LOC389332A0A1B0GUA5 103 aa18.71■□□□□ 0.59
SHOX2-201ENST00000389589 AMTNQ6UX39 209 aa18.71■□□□□ 0.59
SHOX2-201ENST00000389589 MAP1LC3AQ9H492 121 aa18.71■□□□□ 0.59
SHOX2-201ENST00000389589 A8MTW9 85 aa18.7■□□□□ 0.58
SHOX2-201ENST00000389589 HLA-DRB4P13762 266 aa18.7■□□□□ 0.58
SHOX2-201ENST00000389589 CD300EQ496F6 205 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms