RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 FOXE3Q13461 319 aa12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 PRO3102Q9H379 93 aa12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 A0A087WX48 190 aa12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 SPXQ9BT56 116 aa12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 GTSF1LQ9H1H1 148 aa12.6□□□□□ -0.39
PTPRN2-201ENST00000389413 IGHV7-4-1A0A0J9YVY3 117 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 TAL2Q16559 108 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 PRADC1Q9BSG0 188 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 SPG11Q96JI7 2443 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 TRBV6-1A0A0K0K1D8 114 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 LCNL1Q6ZST4 164 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 C10orf126Q8N4M7 172 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 IGHV1OR15-1A0A075B7D0 117 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 TRGV1A0A0A0MS02 117 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 INSP01308 110 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 TCF15Q12870 199 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 PCP2Q8IVA1 136 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 CEND1Q8N111 149 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 MSRB1Q9NZV6 116 aa12.59□□□□□ -0.39
PTPRN2-201ENST00000389413 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
PTPRN2-201ENST00000389413 H3BUA1 57 aa12.58□□□□□ -0.4
PTPRN2-201ENST00000389413 CCL25O15444 150 aa12.58□□□□□ -0.4
PTPRN2-201ENST00000389413 BUB3O43684 328 aa12.58□□□□□ -0.4
PTPRN2-201ENST00000389413 CMC4P56277 68 aaPredicted RBP12.58□□□□□ -0.4
PTPRN2-201ENST00000389413 SCRT2Q9NQ03 307 aa12.58□□□□□ -0.4
PTPRN2-201ENST00000389413 OTOGLQ3ZCN5 2332 aa12.58□□□□□ -0.4
PTPRN2-201ENST00000389413 NEGR1Q7Z3B1 354 aa12.58□□□□□ -0.4
PTPRN2-201ENST00000389413 KLK9Q9UKQ9 250 aa12.58□□□□□ -0.4
PTPRN2-201ENST00000389413 NPC2P61916 151 aa12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 A0A1B0GXF2 115 aa12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 CDKN1BP46527 198 aa12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 ANKRD39Q53RE8 183 aa12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 Q8N7P7 452 aa12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 TRAV8-4A0A0B4J246 113 aa12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 Q8N9W7 124 aa12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 RBMY1BA6NDE4 496 aaKnown RBP12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 RBMY1EA6NEQ0 496 aaKnown RBP12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 RBMY1DP0C7P1 496 aaKnown RBP12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 RBMY1A1P0DJD3 496 aaKnown RBP12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 RBMY1CP0DJD4 496 aa12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 KLHL30-AS1Q8NEE0 82 aa12.57□□□□□ -0.4
PTPRN2-201ENST00000389413 I3L3M4 83 aa12.56□□□□□ -0.4
PTPRN2-201ENST00000389413 ATXN8Q156A1 80 aa12.56□□□□□ -0.4
PTPRN2-201ENST00000389413 CHCHD5Q9BSY4 110 aa12.56□□□□□ -0.4
PTPRN2-201ENST00000389413 ATRXP46100 2492 aa12.56□□□□□ -0.4
PTPRN2-201ENST00000389413 K7EMI3 77 aa12.56□□□□□ -0.4
PTPRN2-201ENST00000389413 ZNF493Q6ZR52 646 aa12.56□□□□□ -0.4
PTPRN2-201ENST00000389413 C22orf34Q6ZV56 151 aa12.56□□□□□ -0.4
PTPRN2-201ENST00000389413 RASL10AQ92737 203 aa12.56□□□□□ -0.4
PTPRN2-201ENST00000389413 TRAV12-2A0A075B6T6 113 aa12.55□□□□□ -0.4
PTPRN2-201ENST00000389413 KNCNA6PVL3 124 aa12.55□□□□□ -0.4
PTPRN2-201ENST00000389413 F6UB75 175 aa12.55□□□□□ -0.4
PTPRN2-201ENST00000389413 F8W1H4 67 aa12.55□□□□□ -0.4
PTPRN2-201ENST00000389413 PHLDA1Q8WV24 401 aaPredicted RBP12.55□□□□□ -0.4
PTPRN2-201ENST00000389413 C2orf70A6NJV1 201 aa12.55□□□□□ -0.4
PTPRN2-201ENST00000389413 RHODO00212 210 aa12.55□□□□□ -0.4
PTPRN2-201ENST00000389413 ETDBQ3ZM63 59 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 TNRC6AQ8NDV7 1962 aaKnown RBP12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 LINC00322Q6ZN03 302 aaPredicted RBP12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 UBE2E2Q96LR5 201 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 K7ERJ3 54 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 GNRH2O43555 120 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 MBD6Q96DN6 1003 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 C1orf159Q96HA4 380 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 MLST8Q9BVC4 326 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 SAP30O75446 220 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 CFAP161Q6P656 301 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 FANCD2OSQ96PS1 177 aa12.54□□□□□ -0.4
PTPRN2-201ENST00000389413 FAM208BQ5VWN6 2430 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 IGHV3-53P01767 116 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 ANAPC13Q9BS18 74 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 ATG2AQ2TAZ0 1938 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 TRBV20-1A0A075B6N2 111 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 GDF5OSQ5U4N7 250 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 ZNF48Q96MX3 618 aaPredicted RBP12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 Q8NA96 180 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 EML5Q05BV3 1969 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 PRSS29PA6NIE9 313 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 PRAC2D3DTV9 90 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 CTRLP40313 264 aa12.53□□□□□ -0.4
PTPRN2-201ENST00000389413 C9JAW5 83 aa12.52□□□□□ -0.4
PTPRN2-201ENST00000389413 RNF223E7ERA6 249 aa12.52□□□□□ -0.4
PTPRN2-201ENST00000389413 C2orf82Q6UX34 121 aa12.52□□□□□ -0.4
PTPRN2-201ENST00000389413 TMEM95Q3KNT9 176 aa12.52□□□□□ -0.41
PTPRN2-201ENST00000389413 TCTEX1D4Q5JR98 221 aa12.52□□□□□ -0.41
PTPRN2-201ENST00000389413 GAGE2BQ13066 116 aa12.52□□□□□ -0.41
PTPRN2-201ENST00000389413 GAGE2EQ4V326 116 aa12.52□□□□□ -0.41
PTPRN2-201ENST00000389413 GAGE2DQ9UEU5 116 aa12.52□□□□□ -0.41
PTPRN2-201ENST00000389413 TRBV25-1A0A075B6N4 114 aa12.52□□□□□ -0.41
PTPRN2-201ENST00000389413 LINC00158P58513 81 aa12.52□□□□□ -0.41
PTPRN2-201ENST00000389413 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.41
PTPRN2-201ENST00000389413 C12orf74Q32Q52 190 aa12.51□□□□□ -0.41
PTPRN2-201ENST00000389413 FBXL19-AS1Q494R0 122 aa12.51□□□□□ -0.41
PTPRN2-201ENST00000389413 ADORA2A-AS1P86434 159 aa12.51□□□□□ -0.41
PTPRN2-201ENST00000389413 SRSF2Q01130 221 aaKnown RBP12.51□□□□□ -0.41
PTPRN2-201ENST00000389413 TRAV13-1A0A0B4J241 112 aa12.51□□□□□ -0.41
PTPRN2-201ENST00000389413 MAPK1IP1LQ8NDC0 245 aa12.51□□□□□ -0.41
PTPRN2-201ENST00000389413 C16orf54Q6UWD8 224 aa12.5□□□□□ -0.41
PTPRN2-201ENST00000389413 HCFC1P51610 2035 aa12.5□□□□□ -0.41
PTPRN2-201ENST00000389413 ACACBO00763 2458 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms