RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 MINOS1-NBL1R4GNA1 71 aa3.94□□□□□ -1.78
LTN1-202ENST00000389194 VCYO14598 125 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 DUSP14O95147 198 aaKnown RBP3.93□□□□□ -1.78
LTN1-202ENST00000389194 C9orf139Q6ZV77 190 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 Q96MF0 132 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 NUP210LQ5VU65 1888 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 M0R1W7 72 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 PRR20EP86478 221 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 PRR20CP86479 221 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 PRR20DP86480 221 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 PRR20BP86481 221 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 PRR20AP86496 221 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 TCTEX1D4Q5JR98 221 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 C2orf82Q6UX34 121 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 PATE2Q6UY27 113 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 SDHAF1A6NFY7 115 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 SHISA9B4DS77 424 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 IGHV4-59P01825 116 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 MSMBP08118 114 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 APRG1Q8IVJ8 170 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 TRGV11A0A075B6L2 103 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 PRAC2D3DTV9 90 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 IGHV4-38-2P0DP08 117 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 PLA2G2CQ5R387 149 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 SP5Q6BEB4 398 aaPredicted RBP3.93□□□□□ -1.78
LTN1-202ENST00000389194 SEM1Q6ZVN7 128 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 SSC4DQ8WTU2 575 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 C6orf226Q5I0X4 101 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 TIMM21Q9BVV7 248 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 HOXD3P31249 432 aaPredicted RBP3.93□□□□□ -1.78
LTN1-202ENST00000389194 CEACAM8P31997 349 aaPredicted RBP3.93□□□□□ -1.78
LTN1-202ENST00000389194 S100A7L2Q5SY68 101 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 ZNRF2Q8NHG8 242 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 ATP6V0BQ99437 205 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 LY96Q9Y6Y9 160 aa3.93□□□□□ -1.78
LTN1-202ENST00000389194 SPINK8P0C7L1 97 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 GAGE6Q13070 117 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 TSSC4Q9Y5U2 329 aaPredicted RBP3.92□□□□□ -1.78
LTN1-202ENST00000389194 IGHV1-69DA0A0B4J2H0 117 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 IGHV1-69P01742 117 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 GATA4P43694 442 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 H3BRN7 92 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 YPEL3P61236 119 aaPredicted RBP3.92□□□□□ -1.78
LTN1-202ENST00000389194 BVES-AS1Q5T3Y7 98 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 RASL11AQ6T310 242 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 PRADC1Q9BSG0 188 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 AGPAT4-IT1Q9H0P7 198 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 UBE2E1P51965 193 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 RPL36AP83881 106 aaKnown RBP3.92□□□□□ -1.78
LTN1-202ENST00000389194 RPL36ALQ969Q0 106 aaKnown RBP3.92□□□□□ -1.78
LTN1-202ENST00000389194 C20orf144Q9BQM9 153 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 JPT2Q9H910 190 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.92□□□□□ -1.78
LTN1-202ENST00000389194 IGKV2-29A2NJV5 120 aaPredicted RBP3.92□□□□□ -1.78
LTN1-202ENST00000389194 C1orf229Q6ZS94 237 aaPredicted RBP3.92□□□□□ -1.78
LTN1-202ENST00000389194 IGHV2-70DA0A0C4DH43 119 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 SH2D6Q7Z4S9 175 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 LYPD6BQ8NI32 183 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 MUC4Q99102 2169 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 HTTP42858 3142 aa3.92□□□□□ -1.78
LTN1-202ENST00000389194 PRSS46E5RG02 174 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 CD5LO43866 347 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 GAGE2AQ6NT46 116 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 DAND5Q8N907 189 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 GTSF1Q8WW33 167 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 DLX4Q92988 240 aaPredicted RBP3.91□□□□□ -1.78
LTN1-202ENST00000389194 ACANP16112 2415 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 FASNP49327 2511 aaKnown RBP3.91□□□□□ -1.78
LTN1-202ENST00000389194 EML5Q05BV3 1969 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 RBMY1BA6NDE4 496 aaKnown RBP3.91□□□□□ -1.78
LTN1-202ENST00000389194 RBMY1EA6NEQ0 496 aaKnown RBP3.91□□□□□ -1.78
LTN1-202ENST00000389194 INS-IGF2F8WCM5 200 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 INSP01308 110 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 RBMY1DP0C7P1 496 aaKnown RBP3.91□□□□□ -1.78
LTN1-202ENST00000389194 RBMY1A1P0DJD3 496 aaKnown RBP3.91□□□□□ -1.78
LTN1-202ENST00000389194 RBMY1CP0DJD4 496 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 ANKRD39Q53RE8 183 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 IGKV1-17P01599 117 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 CRPP02741 224 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 GAGE2BQ13066 116 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 GAGE2EQ4V326 116 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 GAGE2DQ9UEU5 116 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 IGHV4-61A0A0C4DH41 118 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 A0A0J9YY99 117 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 TMEM238C9JI98 176 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 CR1LQ2VPA4 569 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 LYPD1Q8N2G4 141 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 FAM110DQ8TAY7 271 aaPredicted RBP3.91□□□□□ -1.78
LTN1-202ENST00000389194 LAMTOR3Q9UHA4 124 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 WDFY4Q6ZS81 3184 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 TRAV12-1A0A0B4J245 112 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 TRBV12-3P01733 135 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 SLURP1P55000 103 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 DEFB112Q30KQ8 113 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 MRPS16Q9Y3D3 137 aaKnown RBP3.91□□□□□ -1.78
LTN1-202ENST00000389194 LINC01548A6NM66 108 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 RNF5Q99942 180 aa3.91□□□□□ -1.78
LTN1-202ENST00000389194 F5H768 121 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 PROP1O75360 226 aa3.9□□□□□ -1.78
LTN1-202ENST00000389194 FGF6P10767 208 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms