RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TRBV19A0A075B6N1 114 aa11.69□□□□□ -0.54
VLDLR-202ENST00000382099 LINC01619G3V211 115 aa11.69□□□□□ -0.54
VLDLR-202ENST00000382099 HLA-DMBP28068 263 aa11.69□□□□□ -0.54
VLDLR-202ENST00000382099 PLGLAQ15195 96 aa11.69□□□□□ -0.54
VLDLR-202ENST00000382099 LINC01620Q4KN68 170 aa11.69□□□□□ -0.54
VLDLR-202ENST00000382099 PRR25Q96S07 402 aa11.69□□□□□ -0.54
VLDLR-202ENST00000382099 CECR9P0C854 216 aa11.69□□□□□ -0.54
VLDLR-202ENST00000382099 Q6ZS46 218 aa11.69□□□□□ -0.54
VLDLR-202ENST00000382099 AKAP13Q12802 2813 aa11.69□□□□□ -0.54
VLDLR-202ENST00000382099 CDX4O14627 284 aaPredicted RBP11.68□□□□□ -0.54
VLDLR-202ENST00000382099 ATXN8Q156A1 80 aa11.68□□□□□ -0.54
VLDLR-202ENST00000382099 C3orf22Q8N5N4 141 aa11.68□□□□□ -0.54
VLDLR-202ENST00000382099 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
VLDLR-202ENST00000382099 FOLR3P41439 243 aa11.68□□□□□ -0.54
VLDLR-202ENST00000382099 GAGE2AQ6NT46 116 aa11.68□□□□□ -0.54
VLDLR-202ENST00000382099 TPSG1Q9NRR2 321 aa11.68□□□□□ -0.54
VLDLR-202ENST00000382099 SIGLEC9Q9Y336 463 aa11.68□□□□□ -0.54
VLDLR-202ENST00000382099 LGALS9O00182 355 aa11.67□□□□□ -0.54
VLDLR-202ENST00000382099 TMEM170BQ5T4T1 132 aa11.67□□□□□ -0.54
VLDLR-202ENST00000382099 IGFL4Q6B9Z1 124 aa11.67□□□□□ -0.54
VLDLR-202ENST00000382099 CUL9Q8IWT3 2517 aa11.67□□□□□ -0.54
VLDLR-202ENST00000382099 SIGLEC15Q6ZMC9 328 aa11.67□□□□□ -0.54
VLDLR-202ENST00000382099 DEFB127Q9H1M4 99 aa11.67□□□□□ -0.54
VLDLR-202ENST00000382099 ASH1LQ9NR48 2969 aaKnown RBP11.67□□□□□ -0.54
VLDLR-202ENST00000382099 LRRC75A-AS1Q8N1F1 130 aa11.67□□□□□ -0.54
VLDLR-202ENST00000382099 LINC00527Q9UJ94 153 aa11.67□□□□□ -0.54
VLDLR-202ENST00000382099 CACNA1BQ00975 2339 aa11.67□□□□□ -0.54
VLDLR-202ENST00000382099 CGB1A6NKQ9 187 aa11.66□□□□□ -0.54
VLDLR-202ENST00000382099 IL17RELQ6ZVW7 336 aa11.66□□□□□ -0.54
VLDLR-202ENST00000382099 APC2O95996 2303 aa11.66□□□□□ -0.54
VLDLR-202ENST00000382099 TRGV3P03979 118 aa11.66□□□□□ -0.54
VLDLR-202ENST00000382099 CD40P25942 277 aa11.66□□□□□ -0.54
VLDLR-202ENST00000382099 ZNF80P51504 273 aaPredicted RBP11.66□□□□□ -0.54
VLDLR-202ENST00000382099 ANKRD11Q6UB99 2663 aaPredicted RBP11.66□□□□□ -0.54
VLDLR-202ENST00000382099 TM4SF5O14894 197 aa11.65□□□□□ -0.54
VLDLR-202ENST00000382099 ELANEP08246 267 aa11.65□□□□□ -0.54
VLDLR-202ENST00000382099 ABCA4P78363 2273 aa11.65□□□□□ -0.54
VLDLR-202ENST00000382099 ZNF22P17026 224 aaPredicted RBP11.65□□□□□ -0.54
VLDLR-202ENST00000382099 HOXB4P17483 251 aaPredicted RBP11.65□□□□□ -0.54
VLDLR-202ENST00000382099 S4R3C0 116 aa11.65□□□□□ -0.54
VLDLR-202ENST00000382099 WNK2Q9Y3S1 2297 aa11.65□□□□□ -0.54
VLDLR-202ENST00000382099 ATRXP46100 2492 aa11.65□□□□□ -0.54
VLDLR-202ENST00000382099 A0A0J9YY99 117 aa11.65□□□□□ -0.54
VLDLR-202ENST00000382099 INS-IGF2F8WCM5 200 aa11.65□□□□□ -0.54
VLDLR-202ENST00000382099 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
VLDLR-202ENST00000382099 TRAV41A0A0B4J266 112 aa11.64□□□□□ -0.55
VLDLR-202ENST00000382099 RPL13AP40429 203 aaKnown RBP11.64□□□□□ -0.55
VLDLR-202ENST00000382099 PMS2CLQ68D20 193 aa11.64□□□□□ -0.55
VLDLR-202ENST00000382099 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
VLDLR-202ENST00000382099 ARRDC1-AS1Q9H2J1 176 aa11.64□□□□□ -0.55
VLDLR-202ENST00000382099 IL11RAQ14626 422 aa11.64□□□□□ -0.55
VLDLR-202ENST00000382099 UQCRQO14949 82 aa11.63□□□□□ -0.55
VLDLR-202ENST00000382099 TRBV6-1A0A0K0K1D8 114 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 SPRY3O43610 288 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 ASCL5Q7RTU5 278 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 TMEM167AQ8TBQ9 72 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 TMEM14CQ9P0S9 112 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 TRBV10-2A0A0K0K1G8 114 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 WIPF1O43516 503 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 IGHV3-30P01768 117 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 IGHV3-30-5P0DP03 117 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 VMA21Q3ZAQ7 101 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 CCL13Q99616 98 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 IGLV2-18A0A075B6J9 118 aa11.62□□□□□ -0.55
VLDLR-202ENST00000382099 SPTBN1Q01082 2364 aaKnown RBP11.61□□□□□ -0.55
VLDLR-202ENST00000382099 SRRM5B3KS81 715 aa11.61□□□□□ -0.55
VLDLR-202ENST00000382099 K7EM74 188 aa11.61□□□□□ -0.55
VLDLR-202ENST00000382099 IGHV3-33P01772 117 aa11.61□□□□□ -0.55
VLDLR-202ENST00000382099 C4orf26Q17RF5 130 aa11.61□□□□□ -0.55
VLDLR-202ENST00000382099 M0R2P5 195 aa11.61□□□□□ -0.55
VLDLR-202ENST00000382099 RPL27AP46776 148 aaKnown RBP11.61□□□□□ -0.55
VLDLR-202ENST00000382099 SPANXN1Q5VSR9 72 aa11.61□□□□□ -0.55
VLDLR-202ENST00000382099 COL6A6A6NMZ7 2263 aa11.6□□□□□ -0.55
VLDLR-202ENST00000382099 TRAV12-1A0A0B4J245 112 aa11.6□□□□□ -0.55
VLDLR-202ENST00000382099 hADV29S1A0JD25 119 aa11.6□□□□□ -0.55
VLDLR-202ENST00000382099 FAM216BQ8N7L0 139 aa11.6□□□□□ -0.55
VLDLR-202ENST00000382099 LRBAP50851 2863 aa11.6□□□□□ -0.55
VLDLR-202ENST00000382099 IGHV3-64A0A075B6Q5 118 aa11.6□□□□□ -0.55
VLDLR-202ENST00000382099 EEF1AKMT3Q96AZ1 226 aa11.6□□□□□ -0.55
VLDLR-202ENST00000382099 DLX1P56177 255 aa11.59□□□□□ -0.55
VLDLR-202ENST00000382099 SRSF2Q01130 221 aaKnown RBP11.59□□□□□ -0.55
VLDLR-202ENST00000382099 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
VLDLR-202ENST00000382099 LGALS3P17931 250 aaKnown RBP11.59□□□□□ -0.55
VLDLR-202ENST00000382099 C2orf66Q6UXQ4 117 aa11.59□□□□□ -0.55
VLDLR-202ENST00000382099 C14orf178Q8N769 122 aaPredicted RBP11.59□□□□□ -0.55
VLDLR-202ENST00000382099 NEXN-AS1Q8NBZ9 246 aa11.59□□□□□ -0.55
VLDLR-202ENST00000382099 PIMREGQ9BSJ6 248 aa11.59□□□□□ -0.55
VLDLR-202ENST00000382099 SHANK2-AS3Q9BTD1 123 aa11.59□□□□□ -0.55
VLDLR-202ENST00000382099 LINC01546A6NGU7 62 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 CCL11P51671 97 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 TMEM219Q86XT9 240 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 CGB3P0DN86 165 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 CGB7P0DN87 165 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 CNEP1R1Q8N9A8 125 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 KIR2DL5BQ8NHK3 375 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 TLN1Q9Y490 2541 aaKnown RBP11.58□□□□□ -0.56
VLDLR-202ENST00000382099 C11orf86A6NJI1 115 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 PRSS2P07478 247 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 CCL3L1P16619 93 aa11.58□□□□□ -0.56
VLDLR-202ENST00000382099 IGFBPL1Q8WX77 278 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms